Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1812:A1816
Extra
PDB:
ATOM 1 O3' C A1811 117.098 118.278 65.934 1.00 43.77 O
ATOM 2 P C A1812 118.619 118.255 65.424 1.00 44.06 P
ATOM 3 OP1 C A1812 118.800 117.039 64.593 1.00 44.48 O
ATOM 4 OP2 C A1812 119.519 118.488 66.583 1.00 44.38 O
ATOM 5 O5' C A1812 118.683 119.506 64.442 1.00 43.06 O
ATOM 6 C5' C A1812 117.909 119.508 63.226 1.00 42.81 C
ATOM 7 C4' C A1812 117.714 120.916 62.716 1.00 42.49 C
ATOM 8 O4' C A1812 117.220 121.763 63.785 1.00 40.30 O
ATOM 9 C3' C A1812 118.961 121.656 62.269 1.00 42.96 C
ATOM 10 O3' C A1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 11 C2' C A1812 118.486 123.100 62.294 1.00 40.61 C
ATOM 12 O2' C A1812 117.636 123.432 61.213 1.00 36.86 O
ATOM 13 C1' C A1812 117.671 123.094 63.583 1.00 39.18 C
ATOM 14 N1 C A1812 118.419 123.528 64.780 1.00 37.62 N
ATOM 15 C2 C A1812 118.520 124.906 65.054 1.00 38.04 C
ATOM 16 O2 C A1812 118.101 125.716 64.225 1.00 38.34 O
ATOM 17 N3 C A1812 119.089 125.310 66.206 1.00 38.50 N
ATOM 18 C4 C A1812 119.591 124.406 67.054 1.00 39.83 C
ATOM 19 N4 C A1812 120.121 124.840 68.212 1.00 40.83 N
ATOM 20 C5 C A1812 119.568 123.012 66.766 1.00 37.72 C
ATOM 21 C6 C A1812 118.975 122.619 65.632 1.00 37.01 C
ATOM 22 P G A1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 23 OP1 G A1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 24 OP2 G A1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 25 O5' G A1813 121.188 122.923 60.333 1.00 47.01 O
TER
ATOM 1 O3' A B1815 115.263 123.598 52.260 1.00 56.88 O
ATOM 2 P A B1816 114.284 123.965 53.491 1.00 54.64 P
ATOM 3 OP1 A B1816 113.131 123.010 53.495 1.00 54.75 O
ATOM 4 OP2 A B1816 114.026 125.415 53.390 1.00 54.99 O
ATOM 5 O5' A B1816 115.158 123.705 54.793 1.00 51.68 O
ATOM 6 C5' A B1816 115.962 122.520 54.928 1.00 47.94 C
ATOM 7 C4' A B1816 116.456 122.393 56.352 1.00 45.56 C
ATOM 8 O4' A B1816 117.199 123.582 56.688 1.00 45.44 O
ATOM 9 C3' A B1816 115.371 122.336 57.414 1.00 44.76 C
ATOM 10 O3' A B1816 114.919 121.009 57.604 1.00 43.18 O
ATOM 11 C2' A B1816 116.078 122.853 58.654 1.00 44.44 C
ATOM 12 O2' A B1816 116.897 121.890 59.273 1.00 45.76 O
ATOM 13 C1' A B1816 116.978 123.918 58.047 1.00 45.20 C
ATOM 14 N9 A B1816 116.365 125.242 58.118 1.00 45.72 N
ATOM 15 C8 A B1816 115.809 126.012 57.123 1.00 46.05 C
ATOM 16 N7 A B1816 115.347 127.158 57.547 1.00 45.52 N
ATOM 17 C5 A B1816 115.611 127.141 58.908 1.00 44.81 C
ATOM 18 C6 A B1816 115.369 128.065 59.918 1.00 44.86 C
ATOM 19 N6 A B1816 114.761 129.233 59.714 1.00 45.47 N
ATOM 20 N1 A B1816 115.771 127.750 61.169 1.00 45.47 N
ATOM 21 C2 A B1816 116.370 126.572 61.372 1.00 44.81 C
ATOM 22 N3 A B1816 116.645 125.618 60.500 1.00 44.34 N
ATOM 23 C4 A B1816 116.238 125.971 59.272 1.00 44.93 C
ATOM 24 P A B1817 113.434 120.752 58.128 1.00 42.48 P
ATOM 25 OP1 A B1817 113.272 119.289 58.097 1.00 43.87 O
ATOM 26 OP2 A B1817 112.509 121.621 57.345 1.00 41.90 O
ATOM 27 O5' A B1817 113.473 121.176 59.659 1.00 41.53 O
TER
ATOM 2 P C A1812 118.619 118.255 65.424 1.00 44.06 P
ATOM 3 OP1 C A1812 118.800 117.039 64.593 1.00 44.48 O
ATOM 4 OP2 C A1812 119.519 118.488 66.583 1.00 44.38 O
ATOM 5 O5' C A1812 118.683 119.506 64.442 1.00 43.06 O
ATOM 6 C5' C A1812 117.909 119.508 63.226 1.00 42.81 C
ATOM 7 C4' C A1812 117.714 120.916 62.716 1.00 42.49 C
ATOM 8 O4' C A1812 117.220 121.763 63.785 1.00 40.30 O
ATOM 9 C3' C A1812 118.961 121.656 62.269 1.00 42.96 C
ATOM 10 O3' C A1812 119.415 121.246 60.989 1.00 47.22 O
ATOM 11 C2' C A1812 118.486 123.100 62.294 1.00 40.61 C
ATOM 12 O2' C A1812 117.636 123.432 61.213 1.00 36.86 O
ATOM 13 C1' C A1812 117.671 123.094 63.583 1.00 39.18 C
ATOM 14 N1 C A1812 118.419 123.528 64.780 1.00 37.62 N
ATOM 15 C2 C A1812 118.520 124.906 65.054 1.00 38.04 C
ATOM 16 O2 C A1812 118.101 125.716 64.225 1.00 38.34 O
ATOM 17 N3 C A1812 119.089 125.310 66.206 1.00 38.50 N
ATOM 18 C4 C A1812 119.591 124.406 67.054 1.00 39.83 C
ATOM 19 N4 C A1812 120.121 124.840 68.212 1.00 40.83 N
ATOM 20 C5 C A1812 119.568 123.012 66.766 1.00 37.72 C
ATOM 21 C6 C A1812 118.975 122.619 65.632 1.00 37.01 C
ATOM 22 P G A1813 120.973 121.366 60.634 1.00 48.11 P
ATOM 23 OP1 G A1813 121.151 120.624 59.370 1.00 47.38 O
ATOM 24 OP2 G A1813 121.743 120.950 61.846 1.00 47.81 O
ATOM 25 O5' G A1813 121.188 122.923 60.333 1.00 47.01 O
TER
ATOM 1 O3' A B1815 115.263 123.598 52.260 1.00 56.88 O
ATOM 2 P A B1816 114.284 123.965 53.491 1.00 54.64 P
ATOM 3 OP1 A B1816 113.131 123.010 53.495 1.00 54.75 O
ATOM 4 OP2 A B1816 114.026 125.415 53.390 1.00 54.99 O
ATOM 5 O5' A B1816 115.158 123.705 54.793 1.00 51.68 O
ATOM 6 C5' A B1816 115.962 122.520 54.928 1.00 47.94 C
ATOM 7 C4' A B1816 116.456 122.393 56.352 1.00 45.56 C
ATOM 8 O4' A B1816 117.199 123.582 56.688 1.00 45.44 O
ATOM 9 C3' A B1816 115.371 122.336 57.414 1.00 44.76 C
ATOM 10 O3' A B1816 114.919 121.009 57.604 1.00 43.18 O
ATOM 11 C2' A B1816 116.078 122.853 58.654 1.00 44.44 C
ATOM 12 O2' A B1816 116.897 121.890 59.273 1.00 45.76 O
ATOM 13 C1' A B1816 116.978 123.918 58.047 1.00 45.20 C
ATOM 14 N9 A B1816 116.365 125.242 58.118 1.00 45.72 N
ATOM 15 C8 A B1816 115.809 126.012 57.123 1.00 46.05 C
ATOM 16 N7 A B1816 115.347 127.158 57.547 1.00 45.52 N
ATOM 17 C5 A B1816 115.611 127.141 58.908 1.00 44.81 C
ATOM 18 C6 A B1816 115.369 128.065 59.918 1.00 44.86 C
ATOM 19 N6 A B1816 114.761 129.233 59.714 1.00 45.47 N
ATOM 20 N1 A B1816 115.771 127.750 61.169 1.00 45.47 N
ATOM 21 C2 A B1816 116.370 126.572 61.372 1.00 44.81 C
ATOM 22 N3 A B1816 116.645 125.618 60.500 1.00 44.34 N
ATOM 23 C4 A B1816 116.238 125.971 59.272 1.00 44.93 C
ATOM 24 P A B1817 113.434 120.752 58.128 1.00 42.48 P
ATOM 25 OP1 A B1817 113.272 119.289 58.097 1.00 43.87 O
ATOM 26 OP2 A B1817 112.509 121.621 57.345 1.00 41.90 O
ATOM 27 O5' A B1817 113.473 121.176 59.659 1.00 41.53 O
TER
Atoms:
C2: (118.520,124.906,65.054)
OP1: (118.800,117.039,64.593)
OP2: (119.519,118.488,66.583)
C4: (119.591,124.406,67.054)
O5': (118.683,119.506,64.442)
C3': (118.961,121.656,62.269)
C1': (117.671,123.094,63.583)
O4': (117.220,121.763,63.785)
C5': (117.909,119.508,63.226)
P: (118.619,118.255,65.424)
O2: (118.101,125.716,64.225)
C4': (117.714,120.916,62.716)
C2': (118.486,123.100,62.294)
O2': (117.636,123.432,61.213)
N1: (118.419,123.528,64.780)
N3: (119.089,125.310,66.206)
N4: (120.121,124.840,68.212)
C6: (118.975,122.619,65.632)
C5: (119.568,123.012,66.766)
O3': (119.415,121.246,60.989)
OP1: (118.800,117.039,64.593)
OP2: (119.519,118.488,66.583)
C4: (119.591,124.406,67.054)
O5': (118.683,119.506,64.442)
C3': (118.961,121.656,62.269)
C1': (117.671,123.094,63.583)
O4': (117.220,121.763,63.785)
C5': (117.909,119.508,63.226)
P: (118.619,118.255,65.424)
O2: (118.101,125.716,64.225)
C4': (117.714,120.916,62.716)
C2': (118.486,123.100,62.294)
O2': (117.636,123.432,61.213)
N1: (118.419,123.528,64.780)
N3: (119.089,125.310,66.206)
N4: (120.121,124.840,68.212)
C6: (118.975,122.619,65.632)
C5: (119.568,123.012,66.766)
O3': (119.415,121.246,60.989)
OP1: (113.131,123.010,53.495)
OP2: (114.026,125.415,53.390)
C3': (115.371,122.336,57.414)
C1': (116.978,123.918,58.047)
C5': (115.962,122.520,54.928)
O4': (117.199,123.582,56.688)
C8: (115.809,126.012,57.123)
O2': (116.897,121.890,59.273)
C6: (115.369,128.065,59.918)
C5: (115.611,127.141,58.908)
C4: (116.238,125.971,59.272)
P: (114.284,123.965,53.491)
C4': (116.456,122.393,56.352)
C2': (116.078,122.853,58.654)
C2: (116.370,126.572,61.372)
N1: (115.771,127.750,61.169)
N3: (116.645,125.618,60.500)
N6: (114.761,129.233,59.714)
N7: (115.347,127.158,57.547)
N9: (116.365,125.242,58.118)
O5': (115.158,123.705,54.793)
O3': (114.919,121.009,57.604)
OP2: (114.026,125.415,53.390)
C3': (115.371,122.336,57.414)
C1': (116.978,123.918,58.047)
C5': (115.962,122.520,54.928)
O4': (117.199,123.582,56.688)
C8: (115.809,126.012,57.123)
O2': (116.897,121.890,59.273)
C6: (115.369,128.065,59.918)
C5: (115.611,127.141,58.908)
C4: (116.238,125.971,59.272)
P: (114.284,123.965,53.491)
C4': (116.456,122.393,56.352)
C2': (116.078,122.853,58.654)
C2: (116.370,126.572,61.372)
N1: (115.771,127.750,61.169)
N3: (116.645,125.618,60.500)
N6: (114.761,129.233,59.714)
N7: (115.347,127.158,57.547)
N9: (116.365,125.242,58.118)
O5': (115.158,123.705,54.793)
O3': (114.919,121.009,57.604)
Image (generated by PyMOL):