ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:G16:E20

Extra

PDB:
ATOM 1 O3' U A 15 16.332 -3.452 33.040 1.00 58.66 O
ATOM 2 P C A 16 15.501 -3.810 34.350 1.00 57.22 P
ATOM 3 OP1 C A 16 14.474 -2.777 34.535 1.00 57.99 O
ATOM 4 OP2 C A 16 16.442 -4.127 35.462 1.00 56.35 O
ATOM 5 O5' C A 16 14.784 -5.164 33.895 1.00 55.50 O
ATOM 6 C5' C A 16 13.772 -5.097 32.905 1.00 55.54 C
ATOM 7 C4' C A 16 13.346 -6.487 32.476 1.00 54.05 C
ATOM 8 O4' C A 16 14.470 -7.196 31.900 1.00 54.00 O
ATOM 9 C3' C A 16 12.950 -7.416 33.603 1.00 52.09 C
ATOM 10 O3' C A 16 11.664 -7.106 34.069 1.00 50.63 O
ATOM 11 C2' C A 16 12.977 -8.743 32.875 1.00 51.05 C
ATOM 12 O2' C A 16 11.849 -8.907 32.057 1.00 53.41 O
ATOM 13 C1' C A 16 14.245 -8.587 32.032 1.00 51.52 C
ATOM 14 N1 C A 16 15.390 -9.246 32.722 1.00 50.00 N
ATOM 15 C2 C A 16 15.588 -10.608 32.510 1.00 49.71 C
ATOM 16 O2 C A 16 14.837 -11.202 31.725 1.00 49.97 O
ATOM 17 N3 C A 16 16.601 -11.243 33.158 1.00 50.42 N
ATOM 18 C4 C A 16 17.386 -10.555 33.996 1.00 51.66 C
ATOM 19 N4 C A 16 18.376 -11.216 34.628 1.00 50.92 N
ATOM 20 C5 C A 16 17.184 -9.154 34.227 1.00 51.97 C
ATOM 21 C6 C A 16 16.183 -8.549 33.583 1.00 50.74 C
ATOM 22 P G A 17 11.377 -7.142 35.644 1.00 50.11 P
ATOM 23 OP1 G A 17 10.004 -6.631 35.859 1.00 51.72 O
ATOM 24 OP2 G A 17 12.522 -6.533 36.381 1.00 49.25 O
ATOM 25 O5' G A 17 11.389 -8.701 35.941 1.00 48.11 O
TER

ATOM 1 O3' A B 19 4.796 -11.466 26.757 1.00 45.02 O
ATOM 2 P A B 20 6.024 -11.518 25.747 1.00 44.52 P
ATOM 3 OP1 A B 20 5.652 -10.764 24.520 1.00 45.82 O
ATOM 4 OP2 A B 20 6.440 -12.954 25.613 1.00 42.43 O
ATOM 5 O5' A B 20 7.121 -10.650 26.527 1.00 43.41 O
ATOM 6 C5' A B 20 6.892 -9.271 26.763 1.00 44.06 C
ATOM 7 C4' A B 20 7.902 -8.719 27.754 1.00 47.40 C
ATOM 8 O4' A B 20 7.782 -9.339 29.082 1.00 48.01 O
ATOM 9 C3' A B 20 9.352 -8.949 27.378 1.00 48.14 C
ATOM 10 O3' A B 20 9.770 -7.947 26.494 1.00 49.89 O
ATOM 11 C2' A B 20 10.039 -8.804 28.731 1.00 49.01 C
ATOM 12 O2' A B 20 10.129 -7.441 29.111 1.00 51.43 O
ATOM 13 C1' A B 20 9.072 -9.571 29.640 1.00 47.52 C
ATOM 14 N9 A B 20 9.288 -11.029 29.693 1.00 45.75 N
ATOM 15 C8 A B 20 8.615 -11.998 28.983 1.00 45.11 C
ATOM 16 N7 A B 20 9.000 -13.232 29.231 1.00 43.43 N
ATOM 17 C5 A B 20 9.995 -13.074 30.177 1.00 43.13 C
ATOM 18 C6 A B 20 10.817 -13.997 30.873 1.00 42.36 C
ATOM 19 N6 A B 20 10.760 -15.321 30.698 1.00 43.34 N
ATOM 20 N1 A B 20 11.702 -13.516 31.771 1.00 41.25 N
ATOM 21 C2 A B 20 11.779 -12.197 31.947 1.00 41.45 C
ATOM 22 N3 A B 20 11.060 -11.232 31.357 1.00 43.41 N
ATOM 23 C4 A B 20 10.178 -11.730 30.476 1.00 43.79 C
ATOM 24 P G B 21 10.493 -8.343 25.123 1.00 49.84 P
ATOM 25 OP1 G B 21 10.958 -7.074 24.503 1.00 51.43 O
ATOM 26 OP2 G B 21 9.663 -9.313 24.380 1.00 47.28 O
ATOM 27 O5' G B 21 11.762 -9.129 25.654 1.00 48.96 O
TER

Atoms:
C2: (15.588,-10.608,32.510)
OP1: (14.474,-2.777,34.535)
OP2: (16.442,-4.127,35.462)
C4: (17.386,-10.555,33.996)
O5': (14.784,-5.164,33.895)
C3': (12.950,-7.416,33.603)
C1': (14.245,-8.587,32.032)
O4': (14.470,-7.196,31.900)
C5': (13.772,-5.097,32.905)
P: (15.501,-3.810,34.350)
O2: (14.837,-11.202,31.725)
C4': (13.346,-6.487,32.476)
C2': (12.977,-8.743,32.875)
O2': (11.849,-8.907,32.057)
N1: (15.390,-9.246,32.722)
N3: (16.601,-11.243,33.158)
N4: (18.376,-11.216,34.628)
C6: (16.183,-8.549,33.583)
C5: (17.184,-9.154,34.227)
O3': (11.664,-7.106,34.069)
OP1: (5.652,-10.764,24.520)
OP2: (6.440,-12.954,25.613)
C3': (9.352,-8.949,27.378)
C1': (9.072,-9.571,29.640)
C5': (6.892,-9.271,26.763)
O4': (7.782,-9.339,29.082)
C8: (8.615,-11.998,28.983)
O2': (10.129,-7.441,29.111)
C6: (10.817,-13.997,30.873)
C5: (9.995,-13.074,30.177)
C4: (10.178,-11.730,30.476)
P: (6.024,-11.518,25.747)
C4': (7.902,-8.719,27.754)
C2': (10.039,-8.804,28.731)
C2: (11.779,-12.197,31.947)
N1: (11.702,-13.516,31.771)
N3: (11.060,-11.232,31.357)
N6: (10.760,-15.321,30.698)
N7: (9.000,-13.232,29.231)
N9: (9.288,-11.029,29.693)
O5': (7.121,-10.650,26.527)
O3': (9.770,-7.947,26.494)
Image (generated by PyMOL):
PyMOL image
show in jmol