ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A455:A166

Extra

PDB:
ATOM 1 O3' A A 454 -14.188 182.536 175.359 1.00 55.49 O
ATOM 2 P C A 455 -13.715 181.974 176.790 1.00 69.18 P
ATOM 3 OP1 C A 455 -14.599 180.828 177.131 1.00 47.88 O
ATOM 4 OP2 C A 455 -13.615 183.118 177.733 1.00 59.38 O
ATOM 5 O5' C A 455 -12.239 181.433 176.450 1.00 49.15 O
ATOM 6 C5' C A 455 -12.156 180.461 175.416 1.00 54.02 C
ATOM 7 C4' C A 455 -10.773 179.881 175.239 1.00 47.18 C
ATOM 8 O4' C A 455 -9.997 180.776 174.419 1.00 51.03 O
ATOM 9 C3' C A 455 -10.013 179.645 176.529 1.00 45.28 C
ATOM 10 O3' C A 455 -10.144 178.278 176.834 1.00 43.81 O
ATOM 11 C2' C A 455 -8.586 179.914 176.101 1.00 57.44 C
ATOM 12 O2' C A 455 -8.022 178.751 175.531 1.00 59.60 O
ATOM 13 C1' C A 455 -8.737 180.971 175.014 1.00 60.56 C
ATOM 14 N1 C A 455 -8.664 182.379 175.491 1.00 62.58 N
ATOM 15 C2 C A 455 -7.421 183.026 175.552 1.00 58.34 C
ATOM 16 O2 C A 455 -6.397 182.411 175.219 1.00 56.14 O
ATOM 17 N3 C A 455 -7.366 184.313 175.978 1.00 60.09 N
ATOM 18 C4 C A 455 -8.483 184.942 176.331 1.00 58.93 C
ATOM 19 N4 C A 455 -8.378 186.208 176.745 1.00 63.54 N
ATOM 20 C5 C A 455 -9.756 184.300 176.269 1.00 63.40 C
ATOM 21 C6 C A 455 -9.805 183.034 175.847 1.00 63.68 C
ATOM 22 P U A 456 -9.932 177.683 178.307 1.00 49.53 P
ATOM 23 OP1 U A 456 -10.366 176.266 178.227 1.00 50.25 O
ATOM 24 OP2 U A 456 -10.526 178.605 179.303 1.00 53.67 O
ATOM 25 O5' U A 456 -8.352 177.700 178.529 1.00 55.74 O
TER

ATOM 1 O3' A B 165 -5.032 171.657 172.868 1.00 54.92 O
ATOM 2 P A B 166 -5.871 171.716 171.503 1.00 50.95 P
ATOM 3 OP1 A B 166 -6.720 170.494 171.449 1.00 52.26 O
ATOM 4 OP2 A B 166 -4.949 172.023 170.379 1.00 43.62 O
ATOM 5 O5' A B 166 -6.838 172.977 171.713 1.00 39.58 O
ATOM 6 C5' A B 166 -7.952 172.875 172.598 1.00 47.49 C
ATOM 7 C4' A B 166 -8.248 174.201 173.279 1.00 47.56 C
ATOM 8 O4' A B 166 -7.021 174.758 173.816 1.00 53.00 O
ATOM 9 C3' A B 166 -8.784 175.299 172.374 1.00 53.02 C
ATOM 10 O3' A B 166 -10.183 175.165 172.241 1.00 44.02 O
ATOM 11 C2' A B 166 -8.434 176.544 173.175 1.00 53.06 C
ATOM 12 O2' A B 166 -9.359 176.756 174.221 1.00 52.12 O
ATOM 13 C1' A B 166 -7.070 176.175 173.753 1.00 55.17 C
ATOM 14 N9 A B 166 -5.955 176.664 172.942 1.00 51.45 N
ATOM 15 C8 A B 166 -5.117 175.924 172.155 1.00 55.19 C
ATOM 16 N7 A B 166 -4.206 176.630 171.530 1.00 56.84 N
ATOM 17 C5 A B 166 -4.463 177.929 171.936 1.00 52.80 C
ATOM 18 C6 A B 166 -3.846 179.152 171.628 1.00 48.17 C
ATOM 19 N6 A B 166 -2.798 179.285 170.812 1.00 51.16 N
ATOM 20 N1 A B 166 -4.355 180.249 172.196 1.00 46.70 N
ATOM 21 C2 A B 166 -5.397 180.129 173.016 1.00 51.86 C
ATOM 22 N3 A B 166 -6.057 179.041 173.385 1.00 51.50 N
ATOM 23 C4 A B 166 -5.535 177.964 172.803 1.00 48.86 C
ATOM 24 P C B 167 -10.863 175.621 170.870 1.00 57.75 P
ATOM 25 OP1 C B 167 -12.303 175.333 171.015 1.00 81.68 O
ATOM 26 OP2 C B 167 -10.109 175.077 169.721 1.00 54.58 O
ATOM 27 O5' C B 167 -10.649 177.200 170.858 1.00 66.52 O
TER

Atoms:
C2: (-7.421,183.026,175.552)
OP1: (-14.599,180.828,177.131)
OP2: (-13.615,183.118,177.733)
C4: (-8.483,184.942,176.331)
O5': (-12.239,181.433,176.450)
C3': (-10.013,179.645,176.529)
C1': (-8.737,180.971,175.014)
O4': (-9.997,180.776,174.419)
C5': (-12.156,180.461,175.416)
P: (-13.715,181.974,176.790)
O2: (-6.397,182.411,175.219)
C4': (-10.773,179.881,175.239)
C2': (-8.586,179.914,176.101)
O2': (-8.022,178.751,175.531)
N1: (-8.664,182.379,175.491)
N3: (-7.366,184.313,175.978)
N4: (-8.378,186.208,176.745)
C6: (-9.805,183.034,175.847)
C5: (-9.756,184.300,176.269)
O3': (-10.144,178.278,176.834)
OP1: (-6.720,170.494,171.449)
OP2: (-4.949,172.023,170.379)
C3': (-8.784,175.299,172.374)
C1': (-7.070,176.175,173.753)
C5': (-7.952,172.875,172.598)
O4': (-7.021,174.758,173.816)
C8: (-5.117,175.924,172.155)
O2': (-9.359,176.756,174.221)
C6: (-3.846,179.152,171.628)
C5: (-4.463,177.929,171.936)
C4: (-5.535,177.964,172.803)
P: (-5.871,171.716,171.503)
C4': (-8.248,174.201,173.279)
C2': (-8.434,176.544,173.175)
C2: (-5.397,180.129,173.016)
N1: (-4.355,180.249,172.196)
N3: (-6.057,179.041,173.385)
N6: (-2.798,179.285,170.812)
N7: (-4.206,176.630,171.530)
N9: (-5.955,176.664,172.942)
O5': (-6.838,172.977,171.713)
O3': (-10.183,175.165,172.241)
Image (generated by PyMOL):
PyMOL image
show in jmol