Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2139:A2138
Extra
PDB:
ATOM 1 O3' U A2138 -103.803 24.416 65.206 1.00249.68 O
ATOM 2 P C A2139 -104.037 25.001 63.732 1.00265.32 P
ATOM 3 OP1 C A2139 -104.633 23.942 62.888 1.00229.66 O
ATOM 4 OP2 C A2139 -102.785 25.667 63.303 1.00219.55 O
ATOM 5 O5' C A2139 -105.141 26.125 64.017 1.00240.19 O
ATOM 6 C5' C A2139 -106.279 26.296 63.175 1.00217.03 C
ATOM 7 C4' C A2139 -107.478 26.644 64.040 1.00228.37 C
ATOM 8 O4' C A2139 -108.032 25.419 64.579 1.00238.80 O
ATOM 9 C3' C A2139 -107.135 27.511 65.251 1.00224.46 C
ATOM 10 O3' C A2139 -107.537 28.887 65.118 1.00230.90 O
ATOM 11 C2' C A2139 -107.873 26.870 66.431 1.00230.26 C
ATOM 12 O2' C A2139 -108.773 27.773 67.047 1.00232.69 O
ATOM 13 C1' C A2139 -108.635 25.695 65.825 1.00237.49 C
ATOM 14 N1 C A2139 -108.600 24.476 66.689 1.00239.48 N
ATOM 15 C2 C A2139 -109.793 23.966 67.217 1.00240.97 C
ATOM 16 O2 C A2139 -110.864 24.527 66.955 1.00232.93 O
ATOM 17 N3 C A2139 -109.744 22.864 68.003 1.00232.85 N
ATOM 18 C4 C A2139 -108.572 22.286 68.264 1.00229.62 C
ATOM 19 N4 C A2139 -108.577 21.202 69.044 1.00222.01 N
ATOM 20 C5 C A2139 -107.346 22.791 67.739 1.00220.93 C
ATOM 21 C6 C A2139 -107.405 23.878 66.965 1.00214.79 C
ATOM 22 P C A2140 -108.023 29.578 63.755 1.00235.62 P
ATOM 23 OP1 C A2140 -109.408 29.139 63.466 1.00206.51 O
ATOM 24 OP2 C A2140 -106.959 29.406 62.739 1.00200.07 O
ATOM 25 O5' C A2140 -108.079 31.122 64.183 1.00212.45 O
TER
ATOM 1 O3' C B2137 -98.591 22.920 67.997 1.00228.04 O
ATOM 2 P U B2138 -98.771 23.539 66.533 1.00263.51 P
ATOM 3 OP1 U B2138 -98.724 22.432 65.553 1.00220.43 O
ATOM 4 OP2 U B2138 -97.841 24.683 66.407 1.00228.04 O
ATOM 5 O5' U B2138 -100.262 24.109 66.558 1.00254.34 O
ATOM 6 C5' U B2138 -101.347 23.302 66.991 1.00229.67 C
ATOM 7 C4' U B2138 -102.544 24.191 67.276 1.00244.57 C
ATOM 8 O4' U B2138 -102.220 25.101 68.360 1.00244.95 O
ATOM 9 C3' U B2138 -102.945 25.100 66.121 1.00244.53 C
ATOM 10 O3' U B2138 -103.803 24.416 65.206 1.00249.68 O
ATOM 11 C2' U B2138 -103.631 26.250 66.860 1.00233.68 C
ATOM 12 O2' U B2138 -104.951 25.948 67.270 1.00222.96 O
ATOM 13 C1' U B2138 -102.731 26.394 68.085 1.00234.96 C
ATOM 14 N1 U B2138 -101.588 27.345 67.902 1.00229.48 N
ATOM 15 C2 U B2138 -101.332 28.277 68.883 1.00229.44 C
ATOM 16 O2 U B2138 -101.993 28.364 69.899 1.00227.23 O
ATOM 17 N3 U B2138 -100.269 29.109 68.635 1.00236.74 N
ATOM 18 C4 U B2138 -99.450 29.101 67.520 1.00233.75 C
ATOM 19 O4 U B2138 -98.531 29.911 67.435 1.00229.15 O
ATOM 20 C5 U B2138 -99.777 28.100 66.537 1.00228.68 C
ATOM 21 C6 U B2138 -100.810 27.281 66.762 1.00223.92 C
ATOM 22 P C B2139 -104.037 25.001 63.732 1.00265.32 P
ATOM 23 OP1 C B2139 -104.633 23.942 62.888 1.00229.66 O
ATOM 24 OP2 C B2139 -102.785 25.667 63.303 1.00219.55 O
ATOM 25 O5' C B2139 -105.141 26.125 64.017 1.00240.19 O
TER
ATOM 2 P C A2139 -104.037 25.001 63.732 1.00265.32 P
ATOM 3 OP1 C A2139 -104.633 23.942 62.888 1.00229.66 O
ATOM 4 OP2 C A2139 -102.785 25.667 63.303 1.00219.55 O
ATOM 5 O5' C A2139 -105.141 26.125 64.017 1.00240.19 O
ATOM 6 C5' C A2139 -106.279 26.296 63.175 1.00217.03 C
ATOM 7 C4' C A2139 -107.478 26.644 64.040 1.00228.37 C
ATOM 8 O4' C A2139 -108.032 25.419 64.579 1.00238.80 O
ATOM 9 C3' C A2139 -107.135 27.511 65.251 1.00224.46 C
ATOM 10 O3' C A2139 -107.537 28.887 65.118 1.00230.90 O
ATOM 11 C2' C A2139 -107.873 26.870 66.431 1.00230.26 C
ATOM 12 O2' C A2139 -108.773 27.773 67.047 1.00232.69 O
ATOM 13 C1' C A2139 -108.635 25.695 65.825 1.00237.49 C
ATOM 14 N1 C A2139 -108.600 24.476 66.689 1.00239.48 N
ATOM 15 C2 C A2139 -109.793 23.966 67.217 1.00240.97 C
ATOM 16 O2 C A2139 -110.864 24.527 66.955 1.00232.93 O
ATOM 17 N3 C A2139 -109.744 22.864 68.003 1.00232.85 N
ATOM 18 C4 C A2139 -108.572 22.286 68.264 1.00229.62 C
ATOM 19 N4 C A2139 -108.577 21.202 69.044 1.00222.01 N
ATOM 20 C5 C A2139 -107.346 22.791 67.739 1.00220.93 C
ATOM 21 C6 C A2139 -107.405 23.878 66.965 1.00214.79 C
ATOM 22 P C A2140 -108.023 29.578 63.755 1.00235.62 P
ATOM 23 OP1 C A2140 -109.408 29.139 63.466 1.00206.51 O
ATOM 24 OP2 C A2140 -106.959 29.406 62.739 1.00200.07 O
ATOM 25 O5' C A2140 -108.079 31.122 64.183 1.00212.45 O
TER
ATOM 1 O3' C B2137 -98.591 22.920 67.997 1.00228.04 O
ATOM 2 P U B2138 -98.771 23.539 66.533 1.00263.51 P
ATOM 3 OP1 U B2138 -98.724 22.432 65.553 1.00220.43 O
ATOM 4 OP2 U B2138 -97.841 24.683 66.407 1.00228.04 O
ATOM 5 O5' U B2138 -100.262 24.109 66.558 1.00254.34 O
ATOM 6 C5' U B2138 -101.347 23.302 66.991 1.00229.67 C
ATOM 7 C4' U B2138 -102.544 24.191 67.276 1.00244.57 C
ATOM 8 O4' U B2138 -102.220 25.101 68.360 1.00244.95 O
ATOM 9 C3' U B2138 -102.945 25.100 66.121 1.00244.53 C
ATOM 10 O3' U B2138 -103.803 24.416 65.206 1.00249.68 O
ATOM 11 C2' U B2138 -103.631 26.250 66.860 1.00233.68 C
ATOM 12 O2' U B2138 -104.951 25.948 67.270 1.00222.96 O
ATOM 13 C1' U B2138 -102.731 26.394 68.085 1.00234.96 C
ATOM 14 N1 U B2138 -101.588 27.345 67.902 1.00229.48 N
ATOM 15 C2 U B2138 -101.332 28.277 68.883 1.00229.44 C
ATOM 16 O2 U B2138 -101.993 28.364 69.899 1.00227.23 O
ATOM 17 N3 U B2138 -100.269 29.109 68.635 1.00236.74 N
ATOM 18 C4 U B2138 -99.450 29.101 67.520 1.00233.75 C
ATOM 19 O4 U B2138 -98.531 29.911 67.435 1.00229.15 O
ATOM 20 C5 U B2138 -99.777 28.100 66.537 1.00228.68 C
ATOM 21 C6 U B2138 -100.810 27.281 66.762 1.00223.92 C
ATOM 22 P C B2139 -104.037 25.001 63.732 1.00265.32 P
ATOM 23 OP1 C B2139 -104.633 23.942 62.888 1.00229.66 O
ATOM 24 OP2 C B2139 -102.785 25.667 63.303 1.00219.55 O
ATOM 25 O5' C B2139 -105.141 26.125 64.017 1.00240.19 O
TER
Atoms:
C2: (-109.793,23.966,67.217)
OP1: (-104.633,23.942,62.888)
OP2: (-102.785,25.667,63.303)
C4: (-108.572,22.286,68.264)
O5': (-105.141,26.125,64.017)
C3': (-107.135,27.511,65.251)
C1': (-108.635,25.695,65.825)
O4': (-108.032,25.419,64.579)
C5': (-106.279,26.296,63.175)
P: (-104.037,25.001,63.732)
O2: (-110.864,24.527,66.955)
C4': (-107.478,26.644,64.040)
C2': (-107.873,26.870,66.431)
O2': (-108.773,27.773,67.047)
N1: (-108.600,24.476,66.689)
N3: (-109.744,22.864,68.003)
N4: (-108.577,21.202,69.044)
C6: (-107.405,23.878,66.965)
C5: (-107.346,22.791,67.739)
O3': (-107.537,28.887,65.118)
OP1: (-104.633,23.942,62.888)
OP2: (-102.785,25.667,63.303)
C4: (-108.572,22.286,68.264)
O5': (-105.141,26.125,64.017)
C3': (-107.135,27.511,65.251)
C1': (-108.635,25.695,65.825)
O4': (-108.032,25.419,64.579)
C5': (-106.279,26.296,63.175)
P: (-104.037,25.001,63.732)
O2: (-110.864,24.527,66.955)
C4': (-107.478,26.644,64.040)
C2': (-107.873,26.870,66.431)
O2': (-108.773,27.773,67.047)
N1: (-108.600,24.476,66.689)
N3: (-109.744,22.864,68.003)
N4: (-108.577,21.202,69.044)
C6: (-107.405,23.878,66.965)
C5: (-107.346,22.791,67.739)
O3': (-107.537,28.887,65.118)
C4: (-99.450,29.101,67.520)
N3: (-100.269,29.109,68.635)
OP1: (-98.724,22.432,65.553)
OP2: (-97.841,24.683,66.407)
C2: (-101.332,28.277,68.883)
C1': (-102.731,26.394,68.085)
C3': (-102.945,25.100,66.121)
O5': (-100.262,24.109,66.558)
O4': (-102.220,25.101,68.360)
C5': (-101.347,23.302,66.991)
P: (-98.771,23.539,66.533)
C4': (-102.544,24.191,67.276)
C2': (-103.631,26.250,66.860)
O2': (-104.951,25.948,67.270)
N1: (-101.588,27.345,67.902)
O4: (-98.531,29.911,67.435)
O2: (-101.993,28.364,69.899)
C6: (-100.810,27.281,66.762)
C5: (-99.777,28.100,66.537)
O3': (-103.803,24.416,65.206)
N3: (-100.269,29.109,68.635)
OP1: (-98.724,22.432,65.553)
OP2: (-97.841,24.683,66.407)
C2: (-101.332,28.277,68.883)
C1': (-102.731,26.394,68.085)
C3': (-102.945,25.100,66.121)
O5': (-100.262,24.109,66.558)
O4': (-102.220,25.101,68.360)
C5': (-101.347,23.302,66.991)
P: (-98.771,23.539,66.533)
C4': (-102.544,24.191,67.276)
C2': (-103.631,26.250,66.860)
O2': (-104.951,25.948,67.270)
N1: (-101.588,27.345,67.902)
O4: (-98.531,29.911,67.435)
O2: (-101.993,28.364,69.899)
C6: (-100.810,27.281,66.762)
C5: (-99.777,28.100,66.537)
O3': (-103.803,24.416,65.206)
Image (generated by PyMOL):