Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02177:02176
Extra
PDB:
ATOM 1 O3' U A2176 80.067 39.601 101.804 1.00 56.96 O
ATOM 2 P C A2177 81.278 39.568 102.857 1.00 57.99 P
ATOM 3 OP1 C A2177 82.265 38.559 102.393 1.00 58.69 O
ATOM 4 OP2 C A2177 80.730 39.484 104.232 1.00 58.23 O
ATOM 5 O5' C A2177 81.932 41.003 102.673 1.00 58.41 O
ATOM 6 C5' C A2177 82.270 41.485 101.357 1.00 60.07 C
ATOM 7 C4' C A2177 81.845 42.926 101.200 1.00 61.85 C
ATOM 8 O4' C A2177 80.398 43.028 101.088 1.00 61.84 O
ATOM 9 C3' C A2177 82.176 43.818 102.379 1.00 62.25 C
ATOM 10 O3' C A2177 83.540 44.196 102.394 1.00 62.09 O
ATOM 11 C2' C A2177 81.208 44.975 102.184 1.00 62.65 C
ATOM 12 O2' C A2177 81.621 45.886 101.185 1.00 62.34 O
ATOM 13 C1' C A2177 79.956 44.226 101.714 1.00 62.19 C
ATOM 14 N1 C A2177 79.063 43.876 102.840 1.00 62.05 N
ATOM 15 C2 C A2177 78.391 44.909 103.515 1.00 61.55 C
ATOM 16 O2 C A2177 78.525 46.076 103.117 1.00 60.27 O
ATOM 17 N3 C A2177 77.610 44.606 104.579 1.00 61.59 N
ATOM 18 C4 C A2177 77.476 43.336 104.970 1.00 60.98 C
ATOM 19 N4 C A2177 76.710 43.088 106.037 1.00 59.90 N
ATOM 20 C5 C A2177 78.124 42.264 104.287 1.00 61.24 C
ATOM 21 C6 C A2177 78.900 42.575 103.238 1.00 61.72 C
ATOM 22 P A A2178 84.240 44.555 103.791 1.00 62.60 P
ATOM 23 OP1 A A2178 85.704 44.633 103.551 1.00 63.24 O
ATOM 24 OP2 A A2178 83.723 43.689 104.879 1.00 61.32 O
ATOM 25 O5' A A2178 83.708 46.017 104.083 1.00 62.52 O
TER
ATOM 1 O3' C B2175 80.545 34.333 97.554 1.00 55.75 O
ATOM 2 P U B2176 79.564 34.674 98.788 1.00 56.15 P
ATOM 3 OP1 U B2176 80.127 34.013 99.993 1.00 57.73 O
ATOM 4 OP2 U B2176 78.159 34.403 98.391 1.00 54.29 O
ATOM 5 O5' U B2176 79.717 36.244 98.997 1.00 57.16 O
ATOM 6 C5' U B2176 80.945 36.813 99.489 1.00 55.92 C
ATOM 7 C4' U B2176 80.715 38.240 99.930 1.00 56.27 C
ATOM 8 O4' U B2176 80.182 38.992 98.806 1.00 55.21 O
ATOM 9 C3' U B2176 79.722 38.433 101.074 1.00 55.55 C
ATOM 10 O3' U B2176 80.067 39.601 101.804 1.00 56.96 O
ATOM 11 C2' U B2176 78.424 38.719 100.332 1.00 55.70 C
ATOM 12 O2' U B2176 77.496 39.476 101.082 1.00 56.68 O
ATOM 13 C1' U B2176 78.937 39.550 99.161 1.00 54.85 C
ATOM 14 N1 U B2176 78.055 39.520 97.988 1.00 53.76 N
ATOM 15 C2 U B2176 77.530 40.725 97.543 1.00 51.73 C
ATOM 16 O2 U B2176 77.794 41.799 98.056 1.00 51.27 O
ATOM 17 N3 U B2176 76.688 40.623 96.471 1.00 50.59 N
ATOM 18 C4 U B2176 76.332 39.476 95.805 1.00 51.62 C
ATOM 19 O4 U B2176 75.550 39.548 94.864 1.00 52.64 O
ATOM 20 C5 U B2176 76.929 38.279 96.308 1.00 53.39 C
ATOM 21 C6 U B2176 77.749 38.340 97.356 1.00 52.61 C
ATOM 22 P C B2177 81.278 39.568 102.857 1.00 57.99 P
ATOM 23 OP1 C B2177 82.265 38.559 102.393 1.00 58.69 O
ATOM 24 OP2 C B2177 80.730 39.484 104.232 1.00 58.23 O
ATOM 25 O5' C B2177 81.932 41.003 102.673 1.00 58.41 O
TER
ATOM 2 P C A2177 81.278 39.568 102.857 1.00 57.99 P
ATOM 3 OP1 C A2177 82.265 38.559 102.393 1.00 58.69 O
ATOM 4 OP2 C A2177 80.730 39.484 104.232 1.00 58.23 O
ATOM 5 O5' C A2177 81.932 41.003 102.673 1.00 58.41 O
ATOM 6 C5' C A2177 82.270 41.485 101.357 1.00 60.07 C
ATOM 7 C4' C A2177 81.845 42.926 101.200 1.00 61.85 C
ATOM 8 O4' C A2177 80.398 43.028 101.088 1.00 61.84 O
ATOM 9 C3' C A2177 82.176 43.818 102.379 1.00 62.25 C
ATOM 10 O3' C A2177 83.540 44.196 102.394 1.00 62.09 O
ATOM 11 C2' C A2177 81.208 44.975 102.184 1.00 62.65 C
ATOM 12 O2' C A2177 81.621 45.886 101.185 1.00 62.34 O
ATOM 13 C1' C A2177 79.956 44.226 101.714 1.00 62.19 C
ATOM 14 N1 C A2177 79.063 43.876 102.840 1.00 62.05 N
ATOM 15 C2 C A2177 78.391 44.909 103.515 1.00 61.55 C
ATOM 16 O2 C A2177 78.525 46.076 103.117 1.00 60.27 O
ATOM 17 N3 C A2177 77.610 44.606 104.579 1.00 61.59 N
ATOM 18 C4 C A2177 77.476 43.336 104.970 1.00 60.98 C
ATOM 19 N4 C A2177 76.710 43.088 106.037 1.00 59.90 N
ATOM 20 C5 C A2177 78.124 42.264 104.287 1.00 61.24 C
ATOM 21 C6 C A2177 78.900 42.575 103.238 1.00 61.72 C
ATOM 22 P A A2178 84.240 44.555 103.791 1.00 62.60 P
ATOM 23 OP1 A A2178 85.704 44.633 103.551 1.00 63.24 O
ATOM 24 OP2 A A2178 83.723 43.689 104.879 1.00 61.32 O
ATOM 25 O5' A A2178 83.708 46.017 104.083 1.00 62.52 O
TER
ATOM 1 O3' C B2175 80.545 34.333 97.554 1.00 55.75 O
ATOM 2 P U B2176 79.564 34.674 98.788 1.00 56.15 P
ATOM 3 OP1 U B2176 80.127 34.013 99.993 1.00 57.73 O
ATOM 4 OP2 U B2176 78.159 34.403 98.391 1.00 54.29 O
ATOM 5 O5' U B2176 79.717 36.244 98.997 1.00 57.16 O
ATOM 6 C5' U B2176 80.945 36.813 99.489 1.00 55.92 C
ATOM 7 C4' U B2176 80.715 38.240 99.930 1.00 56.27 C
ATOM 8 O4' U B2176 80.182 38.992 98.806 1.00 55.21 O
ATOM 9 C3' U B2176 79.722 38.433 101.074 1.00 55.55 C
ATOM 10 O3' U B2176 80.067 39.601 101.804 1.00 56.96 O
ATOM 11 C2' U B2176 78.424 38.719 100.332 1.00 55.70 C
ATOM 12 O2' U B2176 77.496 39.476 101.082 1.00 56.68 O
ATOM 13 C1' U B2176 78.937 39.550 99.161 1.00 54.85 C
ATOM 14 N1 U B2176 78.055 39.520 97.988 1.00 53.76 N
ATOM 15 C2 U B2176 77.530 40.725 97.543 1.00 51.73 C
ATOM 16 O2 U B2176 77.794 41.799 98.056 1.00 51.27 O
ATOM 17 N3 U B2176 76.688 40.623 96.471 1.00 50.59 N
ATOM 18 C4 U B2176 76.332 39.476 95.805 1.00 51.62 C
ATOM 19 O4 U B2176 75.550 39.548 94.864 1.00 52.64 O
ATOM 20 C5 U B2176 76.929 38.279 96.308 1.00 53.39 C
ATOM 21 C6 U B2176 77.749 38.340 97.356 1.00 52.61 C
ATOM 22 P C B2177 81.278 39.568 102.857 1.00 57.99 P
ATOM 23 OP1 C B2177 82.265 38.559 102.393 1.00 58.69 O
ATOM 24 OP2 C B2177 80.730 39.484 104.232 1.00 58.23 O
ATOM 25 O5' C B2177 81.932 41.003 102.673 1.00 58.41 O
TER
Atoms:
C2: (78.391,44.909,103.515)
OP1: (82.265,38.559,102.393)
OP2: (80.730,39.484,104.232)
C4: (77.476,43.336,104.970)
O5': (81.932,41.003,102.673)
C3': (82.176,43.818,102.379)
C1': (79.956,44.226,101.714)
O4': (80.398,43.028,101.088)
C5': (82.270,41.485,101.357)
P: (81.278,39.568,102.857)
O2: (78.525,46.076,103.117)
C4': (81.845,42.926,101.200)
C2': (81.208,44.975,102.184)
O2': (81.621,45.886,101.185)
N1: (79.063,43.876,102.840)
N3: (77.610,44.606,104.579)
N4: (76.710,43.088,106.037)
C6: (78.900,42.575,103.238)
C5: (78.124,42.264,104.287)
O3': (83.540,44.196,102.394)
OP1: (82.265,38.559,102.393)
OP2: (80.730,39.484,104.232)
C4: (77.476,43.336,104.970)
O5': (81.932,41.003,102.673)
C3': (82.176,43.818,102.379)
C1': (79.956,44.226,101.714)
O4': (80.398,43.028,101.088)
C5': (82.270,41.485,101.357)
P: (81.278,39.568,102.857)
O2: (78.525,46.076,103.117)
C4': (81.845,42.926,101.200)
C2': (81.208,44.975,102.184)
O2': (81.621,45.886,101.185)
N1: (79.063,43.876,102.840)
N3: (77.610,44.606,104.579)
N4: (76.710,43.088,106.037)
C6: (78.900,42.575,103.238)
C5: (78.124,42.264,104.287)
O3': (83.540,44.196,102.394)
C4: (76.332,39.476,95.805)
N3: (76.688,40.623,96.471)
OP1: (80.127,34.013,99.993)
OP2: (78.159,34.403,98.391)
C2: (77.530,40.725,97.543)
C1': (78.937,39.550,99.161)
C3': (79.722,38.433,101.074)
O5': (79.717,36.244,98.997)
O4': (80.182,38.992,98.806)
C5': (80.945,36.813,99.489)
P: (79.564,34.674,98.788)
C4': (80.715,38.240,99.930)
C2': (78.424,38.719,100.332)
O2': (77.496,39.476,101.082)
N1: (78.055,39.520,97.988)
O4: (75.550,39.548,94.864)
O2: (77.794,41.799,98.056)
C6: (77.749,38.340,97.356)
C5: (76.929,38.279,96.308)
O3': (80.067,39.601,101.804)
N3: (76.688,40.623,96.471)
OP1: (80.127,34.013,99.993)
OP2: (78.159,34.403,98.391)
C2: (77.530,40.725,97.543)
C1': (78.937,39.550,99.161)
C3': (79.722,38.433,101.074)
O5': (79.717,36.244,98.997)
O4': (80.182,38.992,98.806)
C5': (80.945,36.813,99.489)
P: (79.564,34.674,98.788)
C4': (80.715,38.240,99.930)
C2': (78.424,38.719,100.332)
O2': (77.496,39.476,101.082)
N1: (78.055,39.520,97.988)
O4: (75.550,39.548,94.864)
O2: (77.794,41.799,98.056)
C6: (77.749,38.340,97.356)
C5: (76.929,38.279,96.308)
O3': (80.067,39.601,101.804)
Image (generated by PyMOL):