Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A790:A789
Extra
PDB:
ATOM 1 O3' U A 789 -57.473 -49.173 19.146 1.00 11.19 O
ATOM 2 P C A 790 -57.991 -47.673 19.099 1.00 0.13 P
ATOM 3 OP1 C A 790 -59.258 -47.679 18.316 1.00 0.13 O
ATOM 4 OP2 C A 790 -56.854 -46.843 18.593 1.00 0.13 O
ATOM 5 O5' C A 790 -58.289 -47.336 20.617 1.00 0.13 O
ATOM 6 C5' C A 790 -59.533 -47.672 21.191 1.00 0.13 C
ATOM 7 C4' C A 790 -60.110 -46.526 21.971 1.00 0.13 C
ATOM 8 O4' C A 790 -59.318 -46.311 23.178 1.00 0.13 O
ATOM 9 C3' C A 790 -60.127 -45.193 21.255 1.00 0.13 C
ATOM 10 O3' C A 790 -61.241 -44.427 21.738 1.00 0.13 O
ATOM 11 C2' C A 790 -58.837 -44.564 21.742 1.00 0.13 C
ATOM 12 O2' C A 790 -58.785 -43.168 21.605 1.00 0.13 O
ATOM 13 C1' C A 790 -58.875 -44.983 23.196 1.00 0.13 C
ATOM 14 N1 C A 790 -57.599 -44.941 23.883 1.00 0.01 N
ATOM 15 C2 C A 790 -57.594 -44.345 25.139 1.00 0.01 C
ATOM 16 O2 C A 790 -58.642 -43.889 25.601 1.00 0.01 O
ATOM 17 N3 C A 790 -56.453 -44.271 25.830 1.00 0.01 N
ATOM 18 C4 C A 790 -55.364 -44.772 25.308 1.00 0.01 C
ATOM 19 N4 C A 790 -54.283 -44.659 26.034 1.00 0.01 N
ATOM 20 C5 C A 790 -55.323 -45.394 24.042 1.00 0.01 C
ATOM 21 C6 C A 790 -56.469 -45.457 23.360 1.00 0.01 C
ATOM 22 P A A 791 -62.260 -43.774 20.705 1.00 0.01 P
ATOM 23 OP1 A A 791 -62.739 -44.878 19.862 1.00 0.01 O
ATOM 24 OP2 A A 791 -61.554 -42.623 20.066 1.00 0.01 O
ATOM 25 O5' A A 791 -63.438 -43.238 21.598 1.00 0.01 O
TER
ATOM 1 O3' A B 788 -51.565 -50.436 17.751 1.00 0.01 O
ATOM 2 P U B 789 -52.660 -49.326 18.066 1.00 11.19 P
ATOM 3 OP1 U B 789 -53.516 -49.227 16.874 1.00 11.19 O
ATOM 4 OP2 U B 789 -51.952 -48.145 18.507 1.00 11.19 O
ATOM 5 O5' U B 789 -53.441 -49.959 19.307 1.00 11.19 O
ATOM 6 C5' U B 789 -54.306 -51.096 19.165 1.00 11.19 C
ATOM 7 C4' U B 789 -55.729 -50.735 19.520 1.00 11.19 C
ATOM 8 O4' U B 789 -55.872 -50.702 20.977 1.00 11.19 O
ATOM 9 C3' U B 789 -56.089 -49.356 19.082 1.00 11.19 C
ATOM 10 O3' U B 789 -57.473 -49.173 19.146 1.00 11.19 O
ATOM 11 C2' U B 789 -55.452 -48.527 20.177 1.00 11.19 C
ATOM 12 O2' U B 789 -55.914 -47.195 20.240 1.00 11.19 O
ATOM 13 C1' U B 789 -55.826 -49.359 21.428 1.00 11.19 C
ATOM 14 N1 U B 789 -54.808 -49.309 22.521 1.00 11.25 N
ATOM 15 C2 U B 789 -54.913 -50.367 23.379 1.00 11.25 C
ATOM 16 O2 U B 789 -55.817 -51.170 23.192 1.00 11.25 O
ATOM 17 N3 U B 789 -53.977 -50.412 24.426 1.00 11.25 N
ATOM 18 C4 U B 789 -52.946 -49.514 24.698 1.00 11.25 C
ATOM 19 O4 U B 789 -52.198 -49.690 25.675 1.00 11.25 O
ATOM 20 C5 U B 789 -52.893 -48.434 23.748 1.00 11.25 C
ATOM 21 C6 U B 789 -53.779 -48.384 22.725 1.00 11.25 C
ATOM 22 P C B 790 -57.991 -47.673 19.099 1.00 0.13 P
ATOM 23 OP1 C B 790 -59.258 -47.679 18.316 1.00 0.13 O
ATOM 24 OP2 C B 790 -56.854 -46.843 18.593 1.00 0.13 O
ATOM 25 O5' C B 790 -58.289 -47.336 20.617 1.00 0.13 O
TER
ATOM 2 P C A 790 -57.991 -47.673 19.099 1.00 0.13 P
ATOM 3 OP1 C A 790 -59.258 -47.679 18.316 1.00 0.13 O
ATOM 4 OP2 C A 790 -56.854 -46.843 18.593 1.00 0.13 O
ATOM 5 O5' C A 790 -58.289 -47.336 20.617 1.00 0.13 O
ATOM 6 C5' C A 790 -59.533 -47.672 21.191 1.00 0.13 C
ATOM 7 C4' C A 790 -60.110 -46.526 21.971 1.00 0.13 C
ATOM 8 O4' C A 790 -59.318 -46.311 23.178 1.00 0.13 O
ATOM 9 C3' C A 790 -60.127 -45.193 21.255 1.00 0.13 C
ATOM 10 O3' C A 790 -61.241 -44.427 21.738 1.00 0.13 O
ATOM 11 C2' C A 790 -58.837 -44.564 21.742 1.00 0.13 C
ATOM 12 O2' C A 790 -58.785 -43.168 21.605 1.00 0.13 O
ATOM 13 C1' C A 790 -58.875 -44.983 23.196 1.00 0.13 C
ATOM 14 N1 C A 790 -57.599 -44.941 23.883 1.00 0.01 N
ATOM 15 C2 C A 790 -57.594 -44.345 25.139 1.00 0.01 C
ATOM 16 O2 C A 790 -58.642 -43.889 25.601 1.00 0.01 O
ATOM 17 N3 C A 790 -56.453 -44.271 25.830 1.00 0.01 N
ATOM 18 C4 C A 790 -55.364 -44.772 25.308 1.00 0.01 C
ATOM 19 N4 C A 790 -54.283 -44.659 26.034 1.00 0.01 N
ATOM 20 C5 C A 790 -55.323 -45.394 24.042 1.00 0.01 C
ATOM 21 C6 C A 790 -56.469 -45.457 23.360 1.00 0.01 C
ATOM 22 P A A 791 -62.260 -43.774 20.705 1.00 0.01 P
ATOM 23 OP1 A A 791 -62.739 -44.878 19.862 1.00 0.01 O
ATOM 24 OP2 A A 791 -61.554 -42.623 20.066 1.00 0.01 O
ATOM 25 O5' A A 791 -63.438 -43.238 21.598 1.00 0.01 O
TER
ATOM 1 O3' A B 788 -51.565 -50.436 17.751 1.00 0.01 O
ATOM 2 P U B 789 -52.660 -49.326 18.066 1.00 11.19 P
ATOM 3 OP1 U B 789 -53.516 -49.227 16.874 1.00 11.19 O
ATOM 4 OP2 U B 789 -51.952 -48.145 18.507 1.00 11.19 O
ATOM 5 O5' U B 789 -53.441 -49.959 19.307 1.00 11.19 O
ATOM 6 C5' U B 789 -54.306 -51.096 19.165 1.00 11.19 C
ATOM 7 C4' U B 789 -55.729 -50.735 19.520 1.00 11.19 C
ATOM 8 O4' U B 789 -55.872 -50.702 20.977 1.00 11.19 O
ATOM 9 C3' U B 789 -56.089 -49.356 19.082 1.00 11.19 C
ATOM 10 O3' U B 789 -57.473 -49.173 19.146 1.00 11.19 O
ATOM 11 C2' U B 789 -55.452 -48.527 20.177 1.00 11.19 C
ATOM 12 O2' U B 789 -55.914 -47.195 20.240 1.00 11.19 O
ATOM 13 C1' U B 789 -55.826 -49.359 21.428 1.00 11.19 C
ATOM 14 N1 U B 789 -54.808 -49.309 22.521 1.00 11.25 N
ATOM 15 C2 U B 789 -54.913 -50.367 23.379 1.00 11.25 C
ATOM 16 O2 U B 789 -55.817 -51.170 23.192 1.00 11.25 O
ATOM 17 N3 U B 789 -53.977 -50.412 24.426 1.00 11.25 N
ATOM 18 C4 U B 789 -52.946 -49.514 24.698 1.00 11.25 C
ATOM 19 O4 U B 789 -52.198 -49.690 25.675 1.00 11.25 O
ATOM 20 C5 U B 789 -52.893 -48.434 23.748 1.00 11.25 C
ATOM 21 C6 U B 789 -53.779 -48.384 22.725 1.00 11.25 C
ATOM 22 P C B 790 -57.991 -47.673 19.099 1.00 0.13 P
ATOM 23 OP1 C B 790 -59.258 -47.679 18.316 1.00 0.13 O
ATOM 24 OP2 C B 790 -56.854 -46.843 18.593 1.00 0.13 O
ATOM 25 O5' C B 790 -58.289 -47.336 20.617 1.00 0.13 O
TER
Atoms:
C2: (-57.594,-44.345,25.139)
OP1: (-59.258,-47.679,18.316)
OP2: (-56.854,-46.843,18.593)
C4: (-55.364,-44.772,25.308)
O5': (-58.289,-47.336,20.617)
C3': (-60.127,-45.193,21.255)
C1': (-58.875,-44.983,23.196)
O4': (-59.318,-46.311,23.178)
C5': (-59.533,-47.672,21.191)
P: (-57.991,-47.673,19.099)
O2: (-58.642,-43.889,25.601)
C4': (-60.110,-46.526,21.971)
C2': (-58.837,-44.564,21.742)
O2': (-58.785,-43.168,21.605)
N1: (-57.599,-44.941,23.883)
N3: (-56.453,-44.271,25.830)
N4: (-54.283,-44.659,26.034)
C6: (-56.469,-45.457,23.360)
C5: (-55.323,-45.394,24.042)
O3': (-61.241,-44.427,21.738)
OP1: (-59.258,-47.679,18.316)
OP2: (-56.854,-46.843,18.593)
C4: (-55.364,-44.772,25.308)
O5': (-58.289,-47.336,20.617)
C3': (-60.127,-45.193,21.255)
C1': (-58.875,-44.983,23.196)
O4': (-59.318,-46.311,23.178)
C5': (-59.533,-47.672,21.191)
P: (-57.991,-47.673,19.099)
O2: (-58.642,-43.889,25.601)
C4': (-60.110,-46.526,21.971)
C2': (-58.837,-44.564,21.742)
O2': (-58.785,-43.168,21.605)
N1: (-57.599,-44.941,23.883)
N3: (-56.453,-44.271,25.830)
N4: (-54.283,-44.659,26.034)
C6: (-56.469,-45.457,23.360)
C5: (-55.323,-45.394,24.042)
O3': (-61.241,-44.427,21.738)
C4: (-52.946,-49.514,24.698)
N3: (-53.977,-50.412,24.426)
OP1: (-53.516,-49.227,16.874)
OP2: (-51.952,-48.145,18.507)
C2: (-54.913,-50.367,23.379)
C1': (-55.826,-49.359,21.428)
C3': (-56.089,-49.356,19.082)
O5': (-53.441,-49.959,19.307)
O4': (-55.872,-50.702,20.977)
C5': (-54.306,-51.096,19.165)
P: (-52.660,-49.326,18.066)
C4': (-55.729,-50.735,19.520)
C2': (-55.452,-48.527,20.177)
O2': (-55.914,-47.195,20.240)
N1: (-54.808,-49.309,22.521)
O4: (-52.198,-49.690,25.675)
O2: (-55.817,-51.170,23.192)
C6: (-53.779,-48.384,22.725)
C5: (-52.893,-48.434,23.748)
O3': (-57.473,-49.173,19.146)
N3: (-53.977,-50.412,24.426)
OP1: (-53.516,-49.227,16.874)
OP2: (-51.952,-48.145,18.507)
C2: (-54.913,-50.367,23.379)
C1': (-55.826,-49.359,21.428)
C3': (-56.089,-49.356,19.082)
O5': (-53.441,-49.959,19.307)
O4': (-55.872,-50.702,20.977)
C5': (-54.306,-51.096,19.165)
P: (-52.660,-49.326,18.066)
C4': (-55.729,-50.735,19.520)
C2': (-55.452,-48.527,20.177)
O2': (-55.914,-47.195,20.240)
N1: (-54.808,-49.309,22.521)
O4: (-52.198,-49.690,25.675)
O2: (-55.817,-51.170,23.192)
C6: (-53.779,-48.384,22.725)
C5: (-52.893,-48.434,23.748)
O3': (-57.473,-49.173,19.146)
Image (generated by PyMOL):