Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3TRA:A1:A0
Extra
PDB:
ATOM 1 O3' U A 0 29.487 -6.018 21.917 1.00 39.92 O
ATOM 2 P C A 1 28.992 -4.651 22.560 1.00 41.11 P
ATOM 3 OP1 C A 1 28.679 -4.835 24.010 1.00 39.09 O
ATOM 4 OP2 C A 1 27.750 -4.338 21.782 1.00 38.01 O
ATOM 5 O5' C A 1 30.168 -3.590 22.365 1.00 37.12 O
ATOM 6 C5' C A 1 30.928 -3.223 23.546 1.00 36.94 C
ATOM 7 C4' C A 1 31.929 -2.149 23.173 1.00 36.30 C
ATOM 8 O4' C A 1 32.900 -2.672 22.275 1.00 38.15 O
ATOM 9 C3' C A 1 31.356 -0.945 22.440 1.00 35.31 C
ATOM 10 O3' C A 1 30.735 0.020 23.307 1.00 33.51 O
ATOM 11 C2' C A 1 32.580 -0.381 21.722 1.00 33.05 C
ATOM 12 O2' C A 1 33.298 0.401 22.664 1.00 27.91 O
ATOM 13 C1' C A 1 33.328 -1.659 21.378 1.00 37.19 C
ATOM 14 N1 C A 1 33.032 -1.972 19.958 1.00 36.58 N
ATOM 15 C2 C A 1 33.696 -1.224 19.001 1.00 37.53 C
ATOM 16 O2 C A 1 34.498 -0.354 19.345 1.00 40.10 O
ATOM 17 N3 C A 1 33.436 -1.489 17.686 1.00 35.71 N
ATOM 18 C4 C A 1 32.550 -2.462 17.312 1.00 36.85 C
ATOM 19 N4 C A 1 32.333 -2.686 16.026 1.00 38.05 N
ATOM 20 C5 C A 1 31.875 -3.216 18.314 1.00 34.67 C
ATOM 21 C6 C A 1 32.140 -2.938 19.599 1.00 34.63 C
ATOM 22 P C A 2 29.788 1.122 22.589 1.00 28.98 P
ATOM 23 OP1 C A 2 28.956 1.863 23.591 1.00 34.98 O
ATOM 24 OP2 C A 2 28.962 0.292 21.677 1.00 34.00 O
ATOM 25 O5' C A 2 30.850 2.074 21.887 1.00 28.86 O
TER
ATOM 1 OP3 U B 0 27.346 -10.921 21.603 0.64 46.22 O
ATOM 2 P U B 0 28.703 -10.411 22.305 0.64 52.03 P
ATOM 3 OP1 U B 0 28.329 -10.316 23.741 0.64 47.45 O
ATOM 4 OP2 U B 0 29.818 -11.383 22.066 0.64 43.27 O
ATOM 5 O5' U B 0 28.986 -9.003 21.603 0.84 45.96 O
ATOM 6 C5' U B 0 30.120 -8.867 20.706 1.00 40.22 C
ATOM 7 C4' U B 0 31.012 -7.813 21.304 1.00 37.69 C
ATOM 8 O4' U B 0 32.315 -7.861 20.765 1.00 41.41 O
ATOM 9 C3' U B 0 30.542 -6.365 21.050 1.00 39.71 C
ATOM 10 O3' U B 0 29.487 -6.018 21.917 1.00 39.92 O
ATOM 11 C2' U B 0 31.844 -5.590 21.229 1.00 44.21 C
ATOM 12 O2' U B 0 32.025 -5.433 22.649 1.00 39.82 O
ATOM 13 C1' U B 0 32.876 -6.535 20.676 1.00 41.46 C
ATOM 14 N1 U B 0 33.243 -6.290 19.271 1.00 37.48 N
ATOM 15 C2 U B 0 34.473 -5.712 19.016 1.00 39.02 C
ATOM 16 O2 U B 0 35.227 -5.406 19.943 1.00 42.06 O
ATOM 17 N3 U B 0 34.829 -5.494 17.716 1.00 41.12 N
ATOM 18 C4 U B 0 34.009 -5.828 16.684 1.00 42.44 C
ATOM 19 O4 U B 0 34.419 -5.590 15.503 1.00 40.68 O
ATOM 20 C5 U B 0 32.749 -6.426 16.953 1.00 44.10 C
ATOM 21 C6 U B 0 32.417 -6.637 18.239 1.00 41.43 C
ATOM 22 P C B 1 28.992 -4.651 22.560 1.00 41.11 P
ATOM 23 OP1 C B 1 28.679 -4.835 24.010 1.00 39.09 O
ATOM 24 OP2 C B 1 27.750 -4.338 21.782 1.00 38.01 O
ATOM 25 O5' C B 1 30.168 -3.590 22.365 1.00 37.12 O
TER
ATOM 2 P C A 1 28.992 -4.651 22.560 1.00 41.11 P
ATOM 3 OP1 C A 1 28.679 -4.835 24.010 1.00 39.09 O
ATOM 4 OP2 C A 1 27.750 -4.338 21.782 1.00 38.01 O
ATOM 5 O5' C A 1 30.168 -3.590 22.365 1.00 37.12 O
ATOM 6 C5' C A 1 30.928 -3.223 23.546 1.00 36.94 C
ATOM 7 C4' C A 1 31.929 -2.149 23.173 1.00 36.30 C
ATOM 8 O4' C A 1 32.900 -2.672 22.275 1.00 38.15 O
ATOM 9 C3' C A 1 31.356 -0.945 22.440 1.00 35.31 C
ATOM 10 O3' C A 1 30.735 0.020 23.307 1.00 33.51 O
ATOM 11 C2' C A 1 32.580 -0.381 21.722 1.00 33.05 C
ATOM 12 O2' C A 1 33.298 0.401 22.664 1.00 27.91 O
ATOM 13 C1' C A 1 33.328 -1.659 21.378 1.00 37.19 C
ATOM 14 N1 C A 1 33.032 -1.972 19.958 1.00 36.58 N
ATOM 15 C2 C A 1 33.696 -1.224 19.001 1.00 37.53 C
ATOM 16 O2 C A 1 34.498 -0.354 19.345 1.00 40.10 O
ATOM 17 N3 C A 1 33.436 -1.489 17.686 1.00 35.71 N
ATOM 18 C4 C A 1 32.550 -2.462 17.312 1.00 36.85 C
ATOM 19 N4 C A 1 32.333 -2.686 16.026 1.00 38.05 N
ATOM 20 C5 C A 1 31.875 -3.216 18.314 1.00 34.67 C
ATOM 21 C6 C A 1 32.140 -2.938 19.599 1.00 34.63 C
ATOM 22 P C A 2 29.788 1.122 22.589 1.00 28.98 P
ATOM 23 OP1 C A 2 28.956 1.863 23.591 1.00 34.98 O
ATOM 24 OP2 C A 2 28.962 0.292 21.677 1.00 34.00 O
ATOM 25 O5' C A 2 30.850 2.074 21.887 1.00 28.86 O
TER
ATOM 1 OP3 U B 0 27.346 -10.921 21.603 0.64 46.22 O
ATOM 2 P U B 0 28.703 -10.411 22.305 0.64 52.03 P
ATOM 3 OP1 U B 0 28.329 -10.316 23.741 0.64 47.45 O
ATOM 4 OP2 U B 0 29.818 -11.383 22.066 0.64 43.27 O
ATOM 5 O5' U B 0 28.986 -9.003 21.603 0.84 45.96 O
ATOM 6 C5' U B 0 30.120 -8.867 20.706 1.00 40.22 C
ATOM 7 C4' U B 0 31.012 -7.813 21.304 1.00 37.69 C
ATOM 8 O4' U B 0 32.315 -7.861 20.765 1.00 41.41 O
ATOM 9 C3' U B 0 30.542 -6.365 21.050 1.00 39.71 C
ATOM 10 O3' U B 0 29.487 -6.018 21.917 1.00 39.92 O
ATOM 11 C2' U B 0 31.844 -5.590 21.229 1.00 44.21 C
ATOM 12 O2' U B 0 32.025 -5.433 22.649 1.00 39.82 O
ATOM 13 C1' U B 0 32.876 -6.535 20.676 1.00 41.46 C
ATOM 14 N1 U B 0 33.243 -6.290 19.271 1.00 37.48 N
ATOM 15 C2 U B 0 34.473 -5.712 19.016 1.00 39.02 C
ATOM 16 O2 U B 0 35.227 -5.406 19.943 1.00 42.06 O
ATOM 17 N3 U B 0 34.829 -5.494 17.716 1.00 41.12 N
ATOM 18 C4 U B 0 34.009 -5.828 16.684 1.00 42.44 C
ATOM 19 O4 U B 0 34.419 -5.590 15.503 1.00 40.68 O
ATOM 20 C5 U B 0 32.749 -6.426 16.953 1.00 44.10 C
ATOM 21 C6 U B 0 32.417 -6.637 18.239 1.00 41.43 C
ATOM 22 P C B 1 28.992 -4.651 22.560 1.00 41.11 P
ATOM 23 OP1 C B 1 28.679 -4.835 24.010 1.00 39.09 O
ATOM 24 OP2 C B 1 27.750 -4.338 21.782 1.00 38.01 O
ATOM 25 O5' C B 1 30.168 -3.590 22.365 1.00 37.12 O
TER
Atoms:
C2: (33.696,-1.224,19.001)
OP1: (28.679,-4.835,24.010)
OP2: (27.750,-4.338,21.782)
C4: (32.550,-2.462,17.312)
O5': (30.168,-3.590,22.365)
C3': (31.356,-0.945,22.440)
C1': (33.328,-1.659,21.378)
O4': (32.900,-2.672,22.275)
C5': (30.928,-3.223,23.546)
P: (28.992,-4.651,22.560)
O2: (34.498,-0.354,19.345)
C4': (31.929,-2.149,23.173)
C2': (32.580,-0.381,21.722)
O2': (33.298,0.401,22.664)
N1: (33.032,-1.972,19.958)
N3: (33.436,-1.489,17.686)
N4: (32.333,-2.686,16.026)
C6: (32.140,-2.938,19.599)
C5: (31.875,-3.216,18.314)
O3': (30.735,0.020,23.307)
OP1: (28.679,-4.835,24.010)
OP2: (27.750,-4.338,21.782)
C4: (32.550,-2.462,17.312)
O5': (30.168,-3.590,22.365)
C3': (31.356,-0.945,22.440)
C1': (33.328,-1.659,21.378)
O4': (32.900,-2.672,22.275)
C5': (30.928,-3.223,23.546)
P: (28.992,-4.651,22.560)
O2: (34.498,-0.354,19.345)
C4': (31.929,-2.149,23.173)
C2': (32.580,-0.381,21.722)
O2': (33.298,0.401,22.664)
N1: (33.032,-1.972,19.958)
N3: (33.436,-1.489,17.686)
N4: (32.333,-2.686,16.026)
C6: (32.140,-2.938,19.599)
C5: (31.875,-3.216,18.314)
O3': (30.735,0.020,23.307)
C4: (34.009,-5.828,16.684)
N3: (34.829,-5.494,17.716)
OP1: (28.329,-10.316,23.741)
OP2: (29.818,-11.383,22.066)
OP3: (27.346,-10.921,21.603)
O5': (28.986,-9.003,21.603)
C3': (30.542,-6.365,21.050)
C1': (32.876,-6.535,20.676)
C2: (34.473,-5.712,19.016)
O4': (32.315,-7.861,20.765)
C5': (30.120,-8.867,20.706)
P: (28.703,-10.411,22.305)
C4': (31.012,-7.813,21.304)
C2': (31.844,-5.590,21.229)
O2': (32.025,-5.433,22.649)
N1: (33.243,-6.290,19.271)
O4: (34.419,-5.590,15.503)
O2: (35.227,-5.406,19.943)
C6: (32.417,-6.637,18.239)
C5: (32.749,-6.426,16.953)
O3': (29.487,-6.018,21.917)
N3: (34.829,-5.494,17.716)
OP1: (28.329,-10.316,23.741)
OP2: (29.818,-11.383,22.066)
OP3: (27.346,-10.921,21.603)
O5': (28.986,-9.003,21.603)
C3': (30.542,-6.365,21.050)
C1': (32.876,-6.535,20.676)
C2: (34.473,-5.712,19.016)
O4': (32.315,-7.861,20.765)
C5': (30.120,-8.867,20.706)
P: (28.703,-10.411,22.305)
C4': (31.012,-7.813,21.304)
C2': (31.844,-5.590,21.229)
O2': (32.025,-5.433,22.649)
N1: (33.243,-6.290,19.271)
O4: (34.419,-5.590,15.503)
O2: (35.227,-5.406,19.943)
C6: (32.417,-6.637,18.239)
C5: (32.749,-6.426,16.953)
O3': (29.487,-6.018,21.917)
Image (generated by PyMOL):