ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A2300:A2302

Extra

PDB:
ATOM 1 O3' A A2299 -112.654 -35.373 45.349 1.00 76.26 O
ATOM 2 P U A2300 -111.917 -34.459 44.248 1.00 38.08 P
ATOM 3 OP1 U A2300 -110.708 -33.832 44.838 1.00 84.16 O
ATOM 4 OP2 U A2300 -112.968 -33.589 43.648 1.00 83.93 O
ATOM 5 O5' U A2300 -111.473 -35.509 43.138 1.00 50.02 O
ATOM 6 C5' U A2300 -112.333 -35.790 42.016 1.00 50.02 C
ATOM 7 C4' U A2300 -111.517 -36.181 40.805 1.00 50.02 C
ATOM 8 O4' U A2300 -112.303 -35.816 39.644 1.00 50.02 O
ATOM 9 C3' U A2300 -110.176 -35.463 40.664 1.00 50.02 C
ATOM 10 O3' U A2300 -109.235 -36.318 40.009 1.00 50.02 O
ATOM 11 C2' U A2300 -110.512 -34.272 39.781 1.00 50.02 C
ATOM 12 O2' U A2300 -109.404 -33.863 39.011 1.00 50.02 O
ATOM 13 C1' U A2300 -111.632 -34.828 38.900 1.00 50.02 C
ATOM 14 N1 U A2300 -112.625 -33.821 38.495 1.00 68.63 N
ATOM 15 C2 U A2300 -112.702 -33.496 37.151 1.00 68.75 C
ATOM 16 O2 U A2300 -111.982 -33.998 36.300 1.00 68.71 O
ATOM 17 N3 U A2300 -113.650 -32.558 36.834 1.00 68.99 N
ATOM 18 C4 U A2300 -114.505 -31.922 37.697 1.00 68.96 C
ATOM 19 O4 U A2300 -115.313 -31.105 37.249 1.00 68.95 O
ATOM 20 C5 U A2300 -114.363 -32.306 39.071 1.00 68.87 C
ATOM 21 C6 U A2300 -113.453 -33.220 39.413 1.00 68.68 C
ATOM 22 P C A2301 -107.703 -36.397 40.524 1.00 55.80 P
ATOM 23 OP1 C A2301 -107.489 -35.420 41.628 1.00 66.58 O
ATOM 24 OP2 C A2301 -106.827 -36.342 39.328 1.00 66.34 O
ATOM 25 O5' C A2301 -107.573 -37.876 41.110 1.00 27.68 O
TER

ATOM 1 O3' C B2301 -106.835 -40.894 41.127 1.00 27.68 O
ATOM 2 P A B2302 -107.327 -42.187 40.314 1.00 2.74 P
ATOM 3 OP1 A B2302 -108.302 -42.983 41.110 1.00 3.36 O
ATOM 4 OP2 A B2302 -106.106 -42.835 39.818 1.00 3.42 O
ATOM 5 O5' A B2302 -108.062 -41.566 39.051 1.00 6.97 O
ATOM 6 C5' A B2302 -109.428 -41.139 39.125 1.00 6.97 C
ATOM 7 C4' A B2302 -109.945 -40.826 37.738 1.00 6.97 C
ATOM 8 O4' A B2302 -111.381 -40.590 37.781 1.00 6.97 O
ATOM 9 C3' A B2302 -109.316 -39.596 37.093 1.00 6.97 C
ATOM 10 O3' A B2302 -109.238 -39.778 35.674 1.00 6.97 O
ATOM 11 C2' A B2302 -110.357 -38.523 37.366 1.00 6.97 C
ATOM 12 O2' A B2302 -110.302 -37.516 36.387 1.00 6.97 O
ATOM 13 C1' A B2302 -111.658 -39.320 37.258 1.00 6.97 C
ATOM 14 N9 A B2302 -112.795 -38.770 37.988 1.00 26.35 N
ATOM 15 C8 A B2302 -113.310 -39.171 39.190 1.00 26.34 C
ATOM 16 N7 A B2302 -114.383 -38.511 39.550 1.00 26.28 N
ATOM 17 C5 A B2302 -114.577 -37.608 38.519 1.00 26.28 C
ATOM 18 C6 A B2302 -115.548 -36.630 38.295 1.00 26.26 C
ATOM 19 N6 A B2302 -116.571 -36.402 39.112 1.00 26.28 N
ATOM 20 N1 A B2302 -115.440 -35.883 37.183 1.00 26.32 N
ATOM 21 C2 A B2302 -114.429 -36.123 36.351 1.00 26.34 C
ATOM 22 N3 A B2302 -113.463 -37.022 36.441 1.00 26.37 N
ATOM 23 C4 A B2302 -113.595 -37.742 37.563 1.00 26.35 C
ATOM 24 P A B2303 -107.810 -39.849 34.938 1.00 16.93 P
ATOM 25 OP1 A B2303 -106.863 -39.138 35.805 1.00 4.51 O
ATOM 26 OP2 A B2303 -107.970 -39.415 33.542 1.00 4.51 O
ATOM 27 O5' A B2303 -107.448 -41.406 34.938 1.00 11.34 O
TER

Atoms:
C4: (-114.505,-31.922,37.697)
N3: (-113.650,-32.558,36.834)
OP1: (-110.708,-33.832,44.838)
OP2: (-112.968,-33.589,43.648)
C2: (-112.702,-33.496,37.151)
C1': (-111.632,-34.828,38.900)
C3': (-110.176,-35.463,40.664)
O5': (-111.473,-35.509,43.138)
O4': (-112.303,-35.816,39.644)
C5': (-112.333,-35.790,42.016)
P: (-111.917,-34.459,44.248)
C4': (-111.517,-36.181,40.805)
C2': (-110.512,-34.272,39.781)
O2': (-109.404,-33.863,39.011)
N1: (-112.625,-33.821,38.495)
O4: (-115.313,-31.105,37.249)
O2: (-111.982,-33.998,36.300)
C6: (-113.453,-33.220,39.413)
C5: (-114.363,-32.306,39.071)
O3': (-109.235,-36.318,40.009)
OP1: (-108.302,-42.983,41.110)
OP2: (-106.106,-42.835,39.818)
C3': (-109.316,-39.596,37.093)
C1': (-111.658,-39.320,37.258)
C5': (-109.428,-41.139,39.125)
O4': (-111.381,-40.590,37.781)
C8: (-113.310,-39.171,39.190)
O2': (-110.302,-37.516,36.387)
C6: (-115.548,-36.630,38.295)
C5: (-114.577,-37.608,38.519)
C4: (-113.595,-37.742,37.563)
P: (-107.327,-42.187,40.314)
C4': (-109.945,-40.826,37.738)
C2': (-110.357,-38.523,37.366)
C2: (-114.429,-36.123,36.351)
N1: (-115.440,-35.883,37.183)
N3: (-113.463,-37.022,36.441)
N6: (-116.571,-36.402,39.112)
N7: (-114.383,-38.511,39.550)
N9: (-112.795,-38.770,37.988)
O5': (-108.062,-41.566,39.051)
O3': (-109.238,-39.778,35.674)
Image (generated by PyMOL):
PyMOL image
show in jmol