Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2NOK:B6:B5
Extra
PDB:
ATOM 1 O3' U A 5 11.264 28.745 -6.162 1.00100.00 O
ATOM 2 P C A 6 10.620 29.530 -7.416 1.00100.00 P
ATOM 3 OP1 C A 6 11.262 30.874 -7.498 1.00100.00 O
ATOM 4 OP2 C A 6 9.140 29.489 -7.245 1.00100.00 O
ATOM 5 O5' C A 6 11.076 28.661 -8.708 1.00100.00 O
ATOM 6 C5' C A 6 12.442 28.692 -9.149 1.00100.00 C
ATOM 7 C4' C A 6 12.707 27.612 -10.169 1.00100.00 C
ATOM 8 O4' C A 6 12.182 26.342 -9.712 1.00100.00 O
ATOM 9 C3' C A 6 11.955 27.889 -11.452 1.00100.00 C
ATOM 10 O3' C A 6 12.724 28.761 -12.299 1.00100.00 O
ATOM 11 C2' C A 6 11.613 26.500 -12.027 1.00100.00 C
ATOM 12 O2' C A 6 12.302 26.056 -13.196 1.00100.00 O
ATOM 13 C1' C A 6 11.815 25.548 -10.836 1.00100.00 C
ATOM 14 N1 C A 6 10.541 24.781 -10.539 1.00100.00 N
ATOM 15 C2 C A 6 9.987 23.845 -11.454 1.00100.00 C
ATOM 16 O2 C A 6 10.543 23.597 -12.539 1.00100.00 O
ATOM 17 N3 C A 6 8.831 23.212 -11.120 1.00100.00 N
ATOM 18 C4 C A 6 8.234 23.474 -9.956 1.00100.00 C
ATOM 19 N4 C A 6 7.106 22.823 -9.670 1.00100.00 N
ATOM 20 C5 C A 6 8.755 24.420 -9.032 1.00100.00 C
ATOM 21 C6 C A 6 9.892 25.037 -9.362 1.00100.00 C
ATOM 22 P G A 7 11.947 29.741 -13.326 1.00100.00 P
ATOM 23 OP1 G A 7 12.896 30.784 -13.838 1.00100.00 O
ATOM 24 OP2 G A 7 10.692 30.155 -12.618 1.00100.00 O
ATOM 25 O5' G A 7 11.522 28.724 -14.517 1.00100.00 O
TER
ATOM 1 O3' G B 4 7.964 27.156 -1.032 1.00100.00 O
ATOM 2 P U B 5 7.988 27.961 -2.440 1.00100.00 P
ATOM 3 OP1 U B 5 8.314 29.389 -2.146 1.00100.00 O
ATOM 4 OP2 U B 5 6.746 27.644 -3.190 1.00100.00 O
ATOM 5 O5' U B 5 9.217 27.328 -3.260 1.00100.00 O
ATOM 6 C5' U B 5 10.529 27.886 -3.275 1.00100.00 C
ATOM 7 C4' U B 5 11.296 27.196 -4.374 1.00100.00 C
ATOM 8 O4' U B 5 11.117 25.753 -4.295 1.00100.00 O
ATOM 9 C3' U B 5 10.752 27.512 -5.741 1.00100.00 C
ATOM 10 O3' U B 5 11.264 28.745 -6.162 1.00100.00 O
ATOM 11 C2' U B 5 11.300 26.354 -6.562 1.00100.00 C
ATOM 12 O2' U B 5 12.578 26.623 -7.089 1.00100.00 O
ATOM 13 C1' U B 5 11.324 25.174 -5.580 1.00100.00 C
ATOM 14 N1 U B 5 10.287 24.096 -5.980 1.00100.00 N
ATOM 15 C2 U B 5 10.613 23.081 -6.900 1.00100.00 C
ATOM 16 O2 U B 5 11.703 22.943 -7.443 1.00100.00 O
ATOM 17 N3 U B 5 9.597 22.194 -7.204 1.00100.00 N
ATOM 18 C4 U B 5 8.294 22.199 -6.710 1.00100.00 C
ATOM 19 O4 U B 5 7.488 21.331 -7.082 1.00100.00 O
ATOM 20 C5 U B 5 8.019 23.274 -5.769 1.00100.00 C
ATOM 21 C6 U B 5 8.998 24.152 -5.455 1.00100.00 C
ATOM 22 P C B 6 10.620 29.530 -7.416 1.00100.00 P
ATOM 23 OP1 C B 6 11.262 30.874 -7.498 1.00100.00 O
ATOM 24 OP2 C B 6 9.140 29.489 -7.245 1.00100.00 O
ATOM 25 O5' C B 6 11.076 28.661 -8.708 1.00100.00 O
TER
ATOM 2 P C A 6 10.620 29.530 -7.416 1.00100.00 P
ATOM 3 OP1 C A 6 11.262 30.874 -7.498 1.00100.00 O
ATOM 4 OP2 C A 6 9.140 29.489 -7.245 1.00100.00 O
ATOM 5 O5' C A 6 11.076 28.661 -8.708 1.00100.00 O
ATOM 6 C5' C A 6 12.442 28.692 -9.149 1.00100.00 C
ATOM 7 C4' C A 6 12.707 27.612 -10.169 1.00100.00 C
ATOM 8 O4' C A 6 12.182 26.342 -9.712 1.00100.00 O
ATOM 9 C3' C A 6 11.955 27.889 -11.452 1.00100.00 C
ATOM 10 O3' C A 6 12.724 28.761 -12.299 1.00100.00 O
ATOM 11 C2' C A 6 11.613 26.500 -12.027 1.00100.00 C
ATOM 12 O2' C A 6 12.302 26.056 -13.196 1.00100.00 O
ATOM 13 C1' C A 6 11.815 25.548 -10.836 1.00100.00 C
ATOM 14 N1 C A 6 10.541 24.781 -10.539 1.00100.00 N
ATOM 15 C2 C A 6 9.987 23.845 -11.454 1.00100.00 C
ATOM 16 O2 C A 6 10.543 23.597 -12.539 1.00100.00 O
ATOM 17 N3 C A 6 8.831 23.212 -11.120 1.00100.00 N
ATOM 18 C4 C A 6 8.234 23.474 -9.956 1.00100.00 C
ATOM 19 N4 C A 6 7.106 22.823 -9.670 1.00100.00 N
ATOM 20 C5 C A 6 8.755 24.420 -9.032 1.00100.00 C
ATOM 21 C6 C A 6 9.892 25.037 -9.362 1.00100.00 C
ATOM 22 P G A 7 11.947 29.741 -13.326 1.00100.00 P
ATOM 23 OP1 G A 7 12.896 30.784 -13.838 1.00100.00 O
ATOM 24 OP2 G A 7 10.692 30.155 -12.618 1.00100.00 O
ATOM 25 O5' G A 7 11.522 28.724 -14.517 1.00100.00 O
TER
ATOM 1 O3' G B 4 7.964 27.156 -1.032 1.00100.00 O
ATOM 2 P U B 5 7.988 27.961 -2.440 1.00100.00 P
ATOM 3 OP1 U B 5 8.314 29.389 -2.146 1.00100.00 O
ATOM 4 OP2 U B 5 6.746 27.644 -3.190 1.00100.00 O
ATOM 5 O5' U B 5 9.217 27.328 -3.260 1.00100.00 O
ATOM 6 C5' U B 5 10.529 27.886 -3.275 1.00100.00 C
ATOM 7 C4' U B 5 11.296 27.196 -4.374 1.00100.00 C
ATOM 8 O4' U B 5 11.117 25.753 -4.295 1.00100.00 O
ATOM 9 C3' U B 5 10.752 27.512 -5.741 1.00100.00 C
ATOM 10 O3' U B 5 11.264 28.745 -6.162 1.00100.00 O
ATOM 11 C2' U B 5 11.300 26.354 -6.562 1.00100.00 C
ATOM 12 O2' U B 5 12.578 26.623 -7.089 1.00100.00 O
ATOM 13 C1' U B 5 11.324 25.174 -5.580 1.00100.00 C
ATOM 14 N1 U B 5 10.287 24.096 -5.980 1.00100.00 N
ATOM 15 C2 U B 5 10.613 23.081 -6.900 1.00100.00 C
ATOM 16 O2 U B 5 11.703 22.943 -7.443 1.00100.00 O
ATOM 17 N3 U B 5 9.597 22.194 -7.204 1.00100.00 N
ATOM 18 C4 U B 5 8.294 22.199 -6.710 1.00100.00 C
ATOM 19 O4 U B 5 7.488 21.331 -7.082 1.00100.00 O
ATOM 20 C5 U B 5 8.019 23.274 -5.769 1.00100.00 C
ATOM 21 C6 U B 5 8.998 24.152 -5.455 1.00100.00 C
ATOM 22 P C B 6 10.620 29.530 -7.416 1.00100.00 P
ATOM 23 OP1 C B 6 11.262 30.874 -7.498 1.00100.00 O
ATOM 24 OP2 C B 6 9.140 29.489 -7.245 1.00100.00 O
ATOM 25 O5' C B 6 11.076 28.661 -8.708 1.00100.00 O
TER
Atoms:
C2: (9.987,23.845,-11.454)
OP1: (11.262,30.874,-7.498)
OP2: (9.140,29.489,-7.245)
C4: (8.234,23.474,-9.956)
O5': (11.076,28.661,-8.708)
C3': (11.955,27.889,-11.452)
C1': (11.815,25.548,-10.836)
O4': (12.182,26.342,-9.712)
C5': (12.442,28.692,-9.149)
P: (10.620,29.530,-7.416)
O2: (10.543,23.597,-12.539)
C4': (12.707,27.612,-10.169)
C2': (11.613,26.500,-12.027)
O2': (12.302,26.056,-13.196)
N1: (10.541,24.781,-10.539)
N3: (8.831,23.212,-11.120)
N4: (7.106,22.823,-9.670)
C6: (9.892,25.037,-9.362)
C5: (8.755,24.420,-9.032)
O3': (12.724,28.761,-12.299)
OP1: (11.262,30.874,-7.498)
OP2: (9.140,29.489,-7.245)
C4: (8.234,23.474,-9.956)
O5': (11.076,28.661,-8.708)
C3': (11.955,27.889,-11.452)
C1': (11.815,25.548,-10.836)
O4': (12.182,26.342,-9.712)
C5': (12.442,28.692,-9.149)
P: (10.620,29.530,-7.416)
O2: (10.543,23.597,-12.539)
C4': (12.707,27.612,-10.169)
C2': (11.613,26.500,-12.027)
O2': (12.302,26.056,-13.196)
N1: (10.541,24.781,-10.539)
N3: (8.831,23.212,-11.120)
N4: (7.106,22.823,-9.670)
C6: (9.892,25.037,-9.362)
C5: (8.755,24.420,-9.032)
O3': (12.724,28.761,-12.299)
C4: (8.294,22.199,-6.710)
N3: (9.597,22.194,-7.204)
OP1: (8.314,29.389,-2.146)
OP2: (6.746,27.644,-3.190)
C2: (10.613,23.081,-6.900)
C1': (11.324,25.174,-5.580)
C3': (10.752,27.512,-5.741)
O5': (9.217,27.328,-3.260)
O4': (11.117,25.753,-4.295)
C5': (10.529,27.886,-3.275)
P: (7.988,27.961,-2.440)
C4': (11.296,27.196,-4.374)
C2': (11.300,26.354,-6.562)
O2': (12.578,26.623,-7.089)
N1: (10.287,24.096,-5.980)
O4: (7.488,21.331,-7.082)
O2: (11.703,22.943,-7.443)
C6: (8.998,24.152,-5.455)
C5: (8.019,23.274,-5.769)
O3': (11.264,28.745,-6.162)
N3: (9.597,22.194,-7.204)
OP1: (8.314,29.389,-2.146)
OP2: (6.746,27.644,-3.190)
C2: (10.613,23.081,-6.900)
C1': (11.324,25.174,-5.580)
C3': (10.752,27.512,-5.741)
O5': (9.217,27.328,-3.260)
O4': (11.117,25.753,-4.295)
C5': (10.529,27.886,-3.275)
P: (7.988,27.961,-2.440)
C4': (11.296,27.196,-4.374)
C2': (11.300,26.354,-6.562)
O2': (12.578,26.623,-7.089)
N1: (10.287,24.096,-5.980)
O4: (7.488,21.331,-7.082)
O2: (11.703,22.943,-7.443)
C6: (8.998,24.152,-5.455)
C5: (8.019,23.274,-5.769)
O3': (11.264,28.745,-6.162)
Image (generated by PyMOL):