Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B28:B27
Extra
PDB:
ATOM 1 O3' U A 27 70.399 17.535 101.830 1.00 73.81 O
ATOM 2 P C A 28 71.725 17.386 100.930 1.00 72.80 P
ATOM 3 OP1 C A 28 72.094 18.742 100.473 1.00 72.86 O
ATOM 4 OP2 C A 28 71.496 16.328 99.932 1.00 73.17 O
ATOM 5 O5' C A 28 72.810 16.869 101.981 1.00 74.72 O
ATOM 6 C5' C A 28 73.070 17.620 103.182 1.00 75.75 C
ATOM 7 C4' C A 28 72.971 16.735 104.404 1.00 77.88 C
ATOM 8 O4' C A 28 71.696 16.027 104.447 1.00 77.47 O
ATOM 9 C3' C A 28 73.985 15.618 104.478 1.00 78.95 C
ATOM 10 O3' C A 28 75.272 16.110 104.824 1.00 80.59 O
ATOM 11 C2' C A 28 73.353 14.681 105.505 1.00 78.55 C
ATOM 12 O2' C A 28 73.477 15.052 106.875 1.00 78.41 O
ATOM 13 C1' C A 28 71.878 14.775 105.101 1.00 78.56 C
ATOM 14 N1 C A 28 71.465 13.687 104.192 1.00 77.78 N
ATOM 15 C2 C A 28 71.316 12.398 104.725 1.00 77.76 C
ATOM 16 O2 C A 28 71.522 12.216 105.937 1.00 78.06 O
ATOM 17 N3 C A 28 70.957 11.386 103.914 1.00 78.43 N
ATOM 18 C4 C A 28 70.749 11.612 102.619 1.00 78.24 C
ATOM 19 N4 C A 28 70.404 10.571 101.865 1.00 78.69 N
ATOM 20 C5 C A 28 70.887 12.913 102.045 1.00 77.39 C
ATOM 21 C6 C A 28 71.239 13.912 102.862 1.00 77.05 C
ATOM 22 P C A 29 76.572 15.537 104.062 1.00 81.70 P
ATOM 23 OP1 C A 29 77.766 15.798 104.908 1.00 80.31 O
ATOM 24 OP2 C A 29 76.530 16.021 102.668 1.00 80.19 O
ATOM 25 O5' C A 29 76.365 13.961 104.029 1.00 83.25 O
TER
ATOM 1 O3' C B 26 64.814 16.873 97.839 1.00 72.94 O
ATOM 2 P U B 27 66.411 16.801 97.722 1.00 71.00 P
ATOM 3 OP1 U B 27 66.821 17.662 96.579 1.00 69.73 O
ATOM 4 OP2 U B 27 66.759 15.379 97.712 1.00 72.84 O
ATOM 5 O5' U B 27 66.907 17.416 99.104 1.00 70.52 O
ATOM 6 C5' U B 27 68.158 17.007 99.665 1.00 70.76 C
ATOM 7 C4' U B 27 68.118 17.071 101.176 1.00 72.29 C
ATOM 8 O4' U B 27 67.069 16.214 101.696 1.00 73.11 O
ATOM 9 C3' U B 27 69.397 16.528 101.783 1.00 73.39 C
ATOM 10 O3' U B 27 70.399 17.535 101.830 1.00 73.81 O
ATOM 11 C2' U B 27 68.956 16.029 103.148 1.00 73.88 C
ATOM 12 O2' U B 27 68.943 17.026 104.144 1.00 73.77 O
ATOM 13 C1' U B 27 67.545 15.509 102.837 1.00 74.69 C
ATOM 14 N1 U B 27 67.484 14.060 102.555 1.00 75.92 N
ATOM 15 C2 U B 27 67.767 13.173 103.591 1.00 76.40 C
ATOM 16 O2 U B 27 68.081 13.538 104.709 1.00 77.33 O
ATOM 17 N3 U B 27 67.674 11.842 103.260 1.00 76.53 N
ATOM 18 C4 U B 27 67.338 11.313 102.030 1.00 76.02 C
ATOM 19 O4 U B 27 67.305 10.090 101.886 1.00 75.37 O
ATOM 20 C5 U B 27 67.071 12.285 101.014 1.00 75.83 C
ATOM 21 C6 U B 27 67.152 13.586 101.300 1.00 75.65 C
ATOM 22 P C B 28 71.725 17.386 100.930 1.00 72.80 P
ATOM 23 OP1 C B 28 72.094 18.742 100.473 1.00 72.86 O
ATOM 24 OP2 C B 28 71.496 16.328 99.932 1.00 73.17 O
ATOM 25 O5' C B 28 72.810 16.869 101.981 1.00 74.72 O
TER
ATOM 2 P C A 28 71.725 17.386 100.930 1.00 72.80 P
ATOM 3 OP1 C A 28 72.094 18.742 100.473 1.00 72.86 O
ATOM 4 OP2 C A 28 71.496 16.328 99.932 1.00 73.17 O
ATOM 5 O5' C A 28 72.810 16.869 101.981 1.00 74.72 O
ATOM 6 C5' C A 28 73.070 17.620 103.182 1.00 75.75 C
ATOM 7 C4' C A 28 72.971 16.735 104.404 1.00 77.88 C
ATOM 8 O4' C A 28 71.696 16.027 104.447 1.00 77.47 O
ATOM 9 C3' C A 28 73.985 15.618 104.478 1.00 78.95 C
ATOM 10 O3' C A 28 75.272 16.110 104.824 1.00 80.59 O
ATOM 11 C2' C A 28 73.353 14.681 105.505 1.00 78.55 C
ATOM 12 O2' C A 28 73.477 15.052 106.875 1.00 78.41 O
ATOM 13 C1' C A 28 71.878 14.775 105.101 1.00 78.56 C
ATOM 14 N1 C A 28 71.465 13.687 104.192 1.00 77.78 N
ATOM 15 C2 C A 28 71.316 12.398 104.725 1.00 77.76 C
ATOM 16 O2 C A 28 71.522 12.216 105.937 1.00 78.06 O
ATOM 17 N3 C A 28 70.957 11.386 103.914 1.00 78.43 N
ATOM 18 C4 C A 28 70.749 11.612 102.619 1.00 78.24 C
ATOM 19 N4 C A 28 70.404 10.571 101.865 1.00 78.69 N
ATOM 20 C5 C A 28 70.887 12.913 102.045 1.00 77.39 C
ATOM 21 C6 C A 28 71.239 13.912 102.862 1.00 77.05 C
ATOM 22 P C A 29 76.572 15.537 104.062 1.00 81.70 P
ATOM 23 OP1 C A 29 77.766 15.798 104.908 1.00 80.31 O
ATOM 24 OP2 C A 29 76.530 16.021 102.668 1.00 80.19 O
ATOM 25 O5' C A 29 76.365 13.961 104.029 1.00 83.25 O
TER
ATOM 1 O3' C B 26 64.814 16.873 97.839 1.00 72.94 O
ATOM 2 P U B 27 66.411 16.801 97.722 1.00 71.00 P
ATOM 3 OP1 U B 27 66.821 17.662 96.579 1.00 69.73 O
ATOM 4 OP2 U B 27 66.759 15.379 97.712 1.00 72.84 O
ATOM 5 O5' U B 27 66.907 17.416 99.104 1.00 70.52 O
ATOM 6 C5' U B 27 68.158 17.007 99.665 1.00 70.76 C
ATOM 7 C4' U B 27 68.118 17.071 101.176 1.00 72.29 C
ATOM 8 O4' U B 27 67.069 16.214 101.696 1.00 73.11 O
ATOM 9 C3' U B 27 69.397 16.528 101.783 1.00 73.39 C
ATOM 10 O3' U B 27 70.399 17.535 101.830 1.00 73.81 O
ATOM 11 C2' U B 27 68.956 16.029 103.148 1.00 73.88 C
ATOM 12 O2' U B 27 68.943 17.026 104.144 1.00 73.77 O
ATOM 13 C1' U B 27 67.545 15.509 102.837 1.00 74.69 C
ATOM 14 N1 U B 27 67.484 14.060 102.555 1.00 75.92 N
ATOM 15 C2 U B 27 67.767 13.173 103.591 1.00 76.40 C
ATOM 16 O2 U B 27 68.081 13.538 104.709 1.00 77.33 O
ATOM 17 N3 U B 27 67.674 11.842 103.260 1.00 76.53 N
ATOM 18 C4 U B 27 67.338 11.313 102.030 1.00 76.02 C
ATOM 19 O4 U B 27 67.305 10.090 101.886 1.00 75.37 O
ATOM 20 C5 U B 27 67.071 12.285 101.014 1.00 75.83 C
ATOM 21 C6 U B 27 67.152 13.586 101.300 1.00 75.65 C
ATOM 22 P C B 28 71.725 17.386 100.930 1.00 72.80 P
ATOM 23 OP1 C B 28 72.094 18.742 100.473 1.00 72.86 O
ATOM 24 OP2 C B 28 71.496 16.328 99.932 1.00 73.17 O
ATOM 25 O5' C B 28 72.810 16.869 101.981 1.00 74.72 O
TER
Atoms:
C2: (71.316,12.398,104.725)
OP1: (72.094,18.742,100.473)
OP2: (71.496,16.328,99.932)
C4: (70.749,11.612,102.619)
O5': (72.810,16.869,101.981)
C3': (73.985,15.618,104.478)
C1': (71.878,14.775,105.101)
O4': (71.696,16.027,104.447)
C5': (73.070,17.620,103.182)
P: (71.725,17.386,100.930)
O2: (71.522,12.216,105.937)
C4': (72.971,16.735,104.404)
C2': (73.353,14.681,105.505)
O2': (73.477,15.052,106.875)
N1: (71.465,13.687,104.192)
N3: (70.957,11.386,103.914)
N4: (70.404,10.571,101.865)
C6: (71.239,13.912,102.862)
C5: (70.887,12.913,102.045)
O3': (75.272,16.110,104.824)
OP1: (72.094,18.742,100.473)
OP2: (71.496,16.328,99.932)
C4: (70.749,11.612,102.619)
O5': (72.810,16.869,101.981)
C3': (73.985,15.618,104.478)
C1': (71.878,14.775,105.101)
O4': (71.696,16.027,104.447)
C5': (73.070,17.620,103.182)
P: (71.725,17.386,100.930)
O2: (71.522,12.216,105.937)
C4': (72.971,16.735,104.404)
C2': (73.353,14.681,105.505)
O2': (73.477,15.052,106.875)
N1: (71.465,13.687,104.192)
N3: (70.957,11.386,103.914)
N4: (70.404,10.571,101.865)
C6: (71.239,13.912,102.862)
C5: (70.887,12.913,102.045)
O3': (75.272,16.110,104.824)
C4: (67.338,11.313,102.030)
N3: (67.674,11.842,103.260)
OP1: (66.821,17.662,96.579)
OP2: (66.759,15.379,97.712)
C2: (67.767,13.173,103.591)
C1': (67.545,15.509,102.837)
C3': (69.397,16.528,101.783)
O5': (66.907,17.416,99.104)
O4': (67.069,16.214,101.696)
C5': (68.158,17.007,99.665)
P: (66.411,16.801,97.722)
C4': (68.118,17.071,101.176)
C2': (68.956,16.029,103.148)
O2': (68.943,17.026,104.144)
N1: (67.484,14.060,102.555)
O4: (67.305,10.090,101.886)
O2: (68.081,13.538,104.709)
C6: (67.152,13.586,101.300)
C5: (67.071,12.285,101.014)
O3': (70.399,17.535,101.830)
N3: (67.674,11.842,103.260)
OP1: (66.821,17.662,96.579)
OP2: (66.759,15.379,97.712)
C2: (67.767,13.173,103.591)
C1': (67.545,15.509,102.837)
C3': (69.397,16.528,101.783)
O5': (66.907,17.416,99.104)
O4': (67.069,16.214,101.696)
C5': (68.158,17.007,99.665)
P: (66.411,16.801,97.722)
C4': (68.118,17.071,101.176)
C2': (68.956,16.029,103.148)
O2': (68.943,17.026,104.144)
N1: (67.484,14.060,102.555)
O4: (67.305,10.090,101.886)
O2: (68.081,13.538,104.709)
C6: (67.152,13.586,101.300)
C5: (67.071,12.285,101.014)
O3': (70.399,17.535,101.830)
Image (generated by PyMOL):