Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 45.165 105.842 117.496 1.00 33.36 O
ATOM 2 P C A1088 45.380 106.148 119.051 1.00 37.86 P
ATOM 3 OP1 C A1088 44.931 107.547 119.307 1.00 37.79 O
ATOM 4 OP2 C A1088 46.757 105.739 119.427 1.00 36.68 O
ATOM 5 O5' C A1088 44.369 105.146 119.763 1.00 37.78 O
ATOM 6 C5' C A1088 43.036 105.554 120.100 1.00 36.72 C
ATOM 7 C4' C A1088 42.277 104.393 120.684 1.00 37.51 C
ATOM 8 O4' C A1088 42.068 103.387 119.664 1.00 36.45 O
ATOM 9 C3' C A1088 42.991 103.633 121.785 1.00 38.76 C
ATOM 10 O3' C A1088 42.845 104.270 123.040 1.00 42.34 O
ATOM 11 C2' C A1088 42.261 102.300 121.769 1.00 38.28 C
ATOM 12 O2' C A1088 41.031 102.357 122.453 1.00 38.46 O
ATOM 13 C1' C A1088 42.015 102.110 120.271 1.00 37.09 C
ATOM 14 N1 C A1088 43.008 101.226 119.632 1.00 37.33 N
ATOM 15 C2 C A1088 42.997 99.874 119.965 1.00 38.81 C
ATOM 16 O2 C A1088 42.136 99.460 120.760 1.00 40.33 O
ATOM 17 N3 C A1088 43.915 99.049 119.417 1.00 39.05 N
ATOM 18 C4 C A1088 44.818 99.525 118.565 1.00 38.97 C
ATOM 19 N4 C A1088 45.722 98.670 118.076 1.00 37.89 N
ATOM 20 C5 C A1088 44.841 100.896 118.184 1.00 38.70 C
ATOM 21 C6 C A1088 43.927 101.706 118.740 1.00 38.24 C
ATOM 22 P U A1089 44.116 104.949 123.740 1.00 44.07 P
ATOM 23 OP1 U A1089 43.712 105.248 125.136 1.00 43.98 O
ATOM 24 OP2 U A1089 44.641 106.036 122.873 1.00 44.25 O
ATOM 25 O5' U A1089 45.196 103.792 123.786 1.00 47.25 O
TER
ATOM 1 O3' C B1086 49.607 101.561 115.336 1.00 32.14 O
ATOM 2 P U B1087 48.375 101.262 116.323 1.00 32.89 P
ATOM 3 OP1 U B1087 48.941 101.215 117.694 1.00 32.33 O
ATOM 4 OP2 U B1087 47.627 100.098 115.803 1.00 33.26 O
ATOM 5 O5' U B1087 47.465 102.556 116.203 1.00 30.84 O
ATOM 6 C5' U B1087 48.024 103.851 116.431 1.00 31.26 C
ATOM 7 C4' U B1087 46.971 104.912 116.275 1.00 31.82 C
ATOM 8 O4' U B1087 46.677 105.131 114.866 1.00 31.60 O
ATOM 9 C3' U B1087 45.642 104.631 116.961 1.00 31.41 C
ATOM 10 O3' U B1087 45.165 105.842 117.496 1.00 33.36 O
ATOM 11 C2' U B1087 44.758 104.174 115.804 1.00 32.21 C
ATOM 12 O2' U B1087 43.389 104.433 116.018 1.00 33.08 O
ATOM 13 C1' U B1087 45.282 105.043 114.663 1.00 32.39 C
ATOM 14 N1 U B1087 45.029 104.532 113.306 1.00 32.45 N
ATOM 15 C2 U B1087 44.411 105.387 112.405 1.00 33.63 C
ATOM 16 O2 U B1087 44.088 106.525 112.687 1.00 35.48 O
ATOM 17 N3 U B1087 44.190 104.862 111.156 1.00 32.76 N
ATOM 18 C4 U B1087 44.515 103.597 110.721 1.00 33.66 C
ATOM 19 O4 U B1087 44.219 103.258 109.573 1.00 32.53 O
ATOM 20 C5 U B1087 45.158 102.772 111.706 1.00 33.86 C
ATOM 21 C6 U B1087 45.385 103.256 112.932 1.00 32.69 C
ATOM 22 P C B1088 45.380 106.148 119.051 1.00 37.86 P
ATOM 23 OP1 C B1088 44.931 107.547 119.307 1.00 37.79 O
ATOM 24 OP2 C B1088 46.757 105.739 119.427 1.00 36.68 O
ATOM 25 O5' C B1088 44.369 105.146 119.763 1.00 37.78 O
TER
ATOM 2 P C A1088 45.380 106.148 119.051 1.00 37.86 P
ATOM 3 OP1 C A1088 44.931 107.547 119.307 1.00 37.79 O
ATOM 4 OP2 C A1088 46.757 105.739 119.427 1.00 36.68 O
ATOM 5 O5' C A1088 44.369 105.146 119.763 1.00 37.78 O
ATOM 6 C5' C A1088 43.036 105.554 120.100 1.00 36.72 C
ATOM 7 C4' C A1088 42.277 104.393 120.684 1.00 37.51 C
ATOM 8 O4' C A1088 42.068 103.387 119.664 1.00 36.45 O
ATOM 9 C3' C A1088 42.991 103.633 121.785 1.00 38.76 C
ATOM 10 O3' C A1088 42.845 104.270 123.040 1.00 42.34 O
ATOM 11 C2' C A1088 42.261 102.300 121.769 1.00 38.28 C
ATOM 12 O2' C A1088 41.031 102.357 122.453 1.00 38.46 O
ATOM 13 C1' C A1088 42.015 102.110 120.271 1.00 37.09 C
ATOM 14 N1 C A1088 43.008 101.226 119.632 1.00 37.33 N
ATOM 15 C2 C A1088 42.997 99.874 119.965 1.00 38.81 C
ATOM 16 O2 C A1088 42.136 99.460 120.760 1.00 40.33 O
ATOM 17 N3 C A1088 43.915 99.049 119.417 1.00 39.05 N
ATOM 18 C4 C A1088 44.818 99.525 118.565 1.00 38.97 C
ATOM 19 N4 C A1088 45.722 98.670 118.076 1.00 37.89 N
ATOM 20 C5 C A1088 44.841 100.896 118.184 1.00 38.70 C
ATOM 21 C6 C A1088 43.927 101.706 118.740 1.00 38.24 C
ATOM 22 P U A1089 44.116 104.949 123.740 1.00 44.07 P
ATOM 23 OP1 U A1089 43.712 105.248 125.136 1.00 43.98 O
ATOM 24 OP2 U A1089 44.641 106.036 122.873 1.00 44.25 O
ATOM 25 O5' U A1089 45.196 103.792 123.786 1.00 47.25 O
TER
ATOM 1 O3' C B1086 49.607 101.561 115.336 1.00 32.14 O
ATOM 2 P U B1087 48.375 101.262 116.323 1.00 32.89 P
ATOM 3 OP1 U B1087 48.941 101.215 117.694 1.00 32.33 O
ATOM 4 OP2 U B1087 47.627 100.098 115.803 1.00 33.26 O
ATOM 5 O5' U B1087 47.465 102.556 116.203 1.00 30.84 O
ATOM 6 C5' U B1087 48.024 103.851 116.431 1.00 31.26 C
ATOM 7 C4' U B1087 46.971 104.912 116.275 1.00 31.82 C
ATOM 8 O4' U B1087 46.677 105.131 114.866 1.00 31.60 O
ATOM 9 C3' U B1087 45.642 104.631 116.961 1.00 31.41 C
ATOM 10 O3' U B1087 45.165 105.842 117.496 1.00 33.36 O
ATOM 11 C2' U B1087 44.758 104.174 115.804 1.00 32.21 C
ATOM 12 O2' U B1087 43.389 104.433 116.018 1.00 33.08 O
ATOM 13 C1' U B1087 45.282 105.043 114.663 1.00 32.39 C
ATOM 14 N1 U B1087 45.029 104.532 113.306 1.00 32.45 N
ATOM 15 C2 U B1087 44.411 105.387 112.405 1.00 33.63 C
ATOM 16 O2 U B1087 44.088 106.525 112.687 1.00 35.48 O
ATOM 17 N3 U B1087 44.190 104.862 111.156 1.00 32.76 N
ATOM 18 C4 U B1087 44.515 103.597 110.721 1.00 33.66 C
ATOM 19 O4 U B1087 44.219 103.258 109.573 1.00 32.53 O
ATOM 20 C5 U B1087 45.158 102.772 111.706 1.00 33.86 C
ATOM 21 C6 U B1087 45.385 103.256 112.932 1.00 32.69 C
ATOM 22 P C B1088 45.380 106.148 119.051 1.00 37.86 P
ATOM 23 OP1 C B1088 44.931 107.547 119.307 1.00 37.79 O
ATOM 24 OP2 C B1088 46.757 105.739 119.427 1.00 36.68 O
ATOM 25 O5' C B1088 44.369 105.146 119.763 1.00 37.78 O
TER
Atoms:
C2: (42.997,99.874,119.965)
OP1: (44.931,107.547,119.307)
OP2: (46.757,105.739,119.427)
C4: (44.818,99.525,118.565)
O5': (44.369,105.146,119.763)
C3': (42.991,103.633,121.785)
C1': (42.015,102.110,120.271)
O4': (42.068,103.387,119.664)
C5': (43.036,105.554,120.100)
P: (45.380,106.148,119.051)
O2: (42.136,99.460,120.760)
C4': (42.277,104.393,120.684)
C2': (42.261,102.300,121.769)
O2': (41.031,102.357,122.453)
N1: (43.008,101.226,119.632)
N3: (43.915,99.049,119.417)
N4: (45.722,98.670,118.076)
C6: (43.927,101.706,118.740)
C5: (44.841,100.896,118.184)
O3': (42.845,104.270,123.040)
OP1: (44.931,107.547,119.307)
OP2: (46.757,105.739,119.427)
C4: (44.818,99.525,118.565)
O5': (44.369,105.146,119.763)
C3': (42.991,103.633,121.785)
C1': (42.015,102.110,120.271)
O4': (42.068,103.387,119.664)
C5': (43.036,105.554,120.100)
P: (45.380,106.148,119.051)
O2: (42.136,99.460,120.760)
C4': (42.277,104.393,120.684)
C2': (42.261,102.300,121.769)
O2': (41.031,102.357,122.453)
N1: (43.008,101.226,119.632)
N3: (43.915,99.049,119.417)
N4: (45.722,98.670,118.076)
C6: (43.927,101.706,118.740)
C5: (44.841,100.896,118.184)
O3': (42.845,104.270,123.040)
C4: (44.515,103.597,110.721)
N3: (44.190,104.862,111.156)
OP1: (48.941,101.215,117.694)
OP2: (47.627,100.098,115.803)
C2: (44.411,105.387,112.405)
C1': (45.282,105.043,114.663)
C3': (45.642,104.631,116.961)
O5': (47.465,102.556,116.203)
O4': (46.677,105.131,114.866)
C5': (48.024,103.851,116.431)
P: (48.375,101.262,116.323)
C4': (46.971,104.912,116.275)
C2': (44.758,104.174,115.804)
O2': (43.389,104.433,116.018)
N1: (45.029,104.532,113.306)
O4: (44.219,103.258,109.573)
O2: (44.088,106.525,112.687)
C6: (45.385,103.256,112.932)
C5: (45.158,102.772,111.706)
O3': (45.165,105.842,117.496)
N3: (44.190,104.862,111.156)
OP1: (48.941,101.215,117.694)
OP2: (47.627,100.098,115.803)
C2: (44.411,105.387,112.405)
C1': (45.282,105.043,114.663)
C3': (45.642,104.631,116.961)
O5': (47.465,102.556,116.203)
O4': (46.677,105.131,114.866)
C5': (48.024,103.851,116.431)
P: (48.375,101.262,116.323)
C4': (46.971,104.912,116.275)
C2': (44.758,104.174,115.804)
O2': (43.389,104.433,116.018)
N1: (45.029,104.532,113.306)
O4: (44.219,103.258,109.573)
O2: (44.088,106.525,112.687)
C6: (45.385,103.256,112.932)
C5: (45.158,102.772,111.706)
O3': (45.165,105.842,117.496)
Image (generated by PyMOL):