Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02177:02176
Extra
PDB:
ATOM 1 O3' U A2176 80.059 39.468 101.601 1.00 65.97 O
ATOM 2 P C A2177 81.231 39.400 102.691 1.00 67.51 P
ATOM 3 OP1 C A2177 82.210 38.379 102.240 1.00 67.33 O
ATOM 4 OP2 C A2177 80.628 39.297 104.045 1.00 67.21 O
ATOM 5 O5' C A2177 81.923 40.823 102.550 1.00 68.54 O
ATOM 6 C5' C A2177 82.291 41.330 101.249 1.00 70.44 C
ATOM 7 C4' C A2177 81.867 42.774 101.109 1.00 72.02 C
ATOM 8 O4' C A2177 80.419 42.872 101.007 1.00 72.31 O
ATOM 9 C3' C A2177 82.203 43.657 102.295 1.00 72.70 C
ATOM 10 O3' C A2177 83.559 44.057 102.305 1.00 73.67 O
ATOM 11 C2' C A2177 81.227 44.812 102.130 1.00 72.64 C
ATOM 12 O2' C A2177 81.635 45.753 101.160 1.00 73.47 O
ATOM 13 C1' C A2177 79.979 44.072 101.638 1.00 72.48 C
ATOM 14 N1 C A2177 79.053 43.731 102.741 1.00 71.43 N
ATOM 15 C2 C A2177 78.405 44.777 103.429 1.00 71.22 C
ATOM 16 O2 C A2177 78.606 45.951 103.075 1.00 69.43 O
ATOM 17 N3 C A2177 77.577 44.477 104.458 1.00 71.58 N
ATOM 18 C4 C A2177 77.375 43.201 104.802 1.00 71.65 C
ATOM 19 N4 C A2177 76.553 42.954 105.827 1.00 70.91 N
ATOM 20 C5 C A2177 78.006 42.122 104.113 1.00 71.41 C
ATOM 21 C6 C A2177 78.828 42.429 103.100 1.00 70.99 C
ATOM 22 P A A2178 84.260 44.415 103.702 1.00 75.20 P
ATOM 23 OP1 A A2178 85.739 44.364 103.509 1.00 74.51 O
ATOM 24 OP2 A A2178 83.633 43.625 104.793 1.00 75.17 O
ATOM 25 O5' A A2178 83.834 45.921 103.943 1.00 74.78 O
TER
ATOM 1 O3' C B2175 80.696 34.281 97.407 1.00 61.59 O
ATOM 2 P U B2176 79.700 34.538 98.647 1.00 62.74 P
ATOM 3 OP1 U B2176 80.298 33.878 99.835 1.00 63.09 O
ATOM 4 OP2 U B2176 78.315 34.193 98.233 1.00 63.43 O
ATOM 5 O5' U B2176 79.758 36.110 98.885 1.00 63.20 O
ATOM 6 C5' U B2176 80.989 36.753 99.258 1.00 64.60 C
ATOM 7 C4' U B2176 80.723 38.169 99.703 1.00 64.81 C
ATOM 8 O4' U B2176 80.169 38.921 98.590 1.00 65.44 O
ATOM 9 C3' U B2176 79.727 38.314 100.848 1.00 65.12 C
ATOM 10 O3' U B2176 80.059 39.468 101.601 1.00 65.97 O
ATOM 11 C2' U B2176 78.423 38.572 100.109 1.00 65.23 C
ATOM 12 O2' U B2176 77.469 39.268 100.879 1.00 66.97 O
ATOM 13 C1' U B2176 78.910 39.444 98.956 1.00 64.96 C
ATOM 14 N1 U B2176 78.036 39.411 97.778 1.00 64.04 N
ATOM 15 C2 U B2176 77.604 40.618 97.254 1.00 63.69 C
ATOM 16 O2 U B2176 77.936 41.704 97.706 1.00 62.85 O
ATOM 17 N3 U B2176 76.772 40.507 96.173 1.00 63.92 N
ATOM 18 C4 U B2176 76.346 39.342 95.571 1.00 65.32 C
ATOM 19 O4 U B2176 75.578 39.401 94.611 1.00 67.15 O
ATOM 20 C5 U B2176 76.849 38.145 96.163 1.00 65.88 C
ATOM 21 C6 U B2176 77.654 38.219 97.218 1.00 64.58 C
ATOM 22 P C B2177 81.231 39.400 102.691 1.00 67.51 P
ATOM 23 OP1 C B2177 82.210 38.379 102.240 1.00 67.33 O
ATOM 24 OP2 C B2177 80.628 39.297 104.045 1.00 67.21 O
ATOM 25 O5' C B2177 81.923 40.823 102.550 1.00 68.54 O
TER
ATOM 2 P C A2177 81.231 39.400 102.691 1.00 67.51 P
ATOM 3 OP1 C A2177 82.210 38.379 102.240 1.00 67.33 O
ATOM 4 OP2 C A2177 80.628 39.297 104.045 1.00 67.21 O
ATOM 5 O5' C A2177 81.923 40.823 102.550 1.00 68.54 O
ATOM 6 C5' C A2177 82.291 41.330 101.249 1.00 70.44 C
ATOM 7 C4' C A2177 81.867 42.774 101.109 1.00 72.02 C
ATOM 8 O4' C A2177 80.419 42.872 101.007 1.00 72.31 O
ATOM 9 C3' C A2177 82.203 43.657 102.295 1.00 72.70 C
ATOM 10 O3' C A2177 83.559 44.057 102.305 1.00 73.67 O
ATOM 11 C2' C A2177 81.227 44.812 102.130 1.00 72.64 C
ATOM 12 O2' C A2177 81.635 45.753 101.160 1.00 73.47 O
ATOM 13 C1' C A2177 79.979 44.072 101.638 1.00 72.48 C
ATOM 14 N1 C A2177 79.053 43.731 102.741 1.00 71.43 N
ATOM 15 C2 C A2177 78.405 44.777 103.429 1.00 71.22 C
ATOM 16 O2 C A2177 78.606 45.951 103.075 1.00 69.43 O
ATOM 17 N3 C A2177 77.577 44.477 104.458 1.00 71.58 N
ATOM 18 C4 C A2177 77.375 43.201 104.802 1.00 71.65 C
ATOM 19 N4 C A2177 76.553 42.954 105.827 1.00 70.91 N
ATOM 20 C5 C A2177 78.006 42.122 104.113 1.00 71.41 C
ATOM 21 C6 C A2177 78.828 42.429 103.100 1.00 70.99 C
ATOM 22 P A A2178 84.260 44.415 103.702 1.00 75.20 P
ATOM 23 OP1 A A2178 85.739 44.364 103.509 1.00 74.51 O
ATOM 24 OP2 A A2178 83.633 43.625 104.793 1.00 75.17 O
ATOM 25 O5' A A2178 83.834 45.921 103.943 1.00 74.78 O
TER
ATOM 1 O3' C B2175 80.696 34.281 97.407 1.00 61.59 O
ATOM 2 P U B2176 79.700 34.538 98.647 1.00 62.74 P
ATOM 3 OP1 U B2176 80.298 33.878 99.835 1.00 63.09 O
ATOM 4 OP2 U B2176 78.315 34.193 98.233 1.00 63.43 O
ATOM 5 O5' U B2176 79.758 36.110 98.885 1.00 63.20 O
ATOM 6 C5' U B2176 80.989 36.753 99.258 1.00 64.60 C
ATOM 7 C4' U B2176 80.723 38.169 99.703 1.00 64.81 C
ATOM 8 O4' U B2176 80.169 38.921 98.590 1.00 65.44 O
ATOM 9 C3' U B2176 79.727 38.314 100.848 1.00 65.12 C
ATOM 10 O3' U B2176 80.059 39.468 101.601 1.00 65.97 O
ATOM 11 C2' U B2176 78.423 38.572 100.109 1.00 65.23 C
ATOM 12 O2' U B2176 77.469 39.268 100.879 1.00 66.97 O
ATOM 13 C1' U B2176 78.910 39.444 98.956 1.00 64.96 C
ATOM 14 N1 U B2176 78.036 39.411 97.778 1.00 64.04 N
ATOM 15 C2 U B2176 77.604 40.618 97.254 1.00 63.69 C
ATOM 16 O2 U B2176 77.936 41.704 97.706 1.00 62.85 O
ATOM 17 N3 U B2176 76.772 40.507 96.173 1.00 63.92 N
ATOM 18 C4 U B2176 76.346 39.342 95.571 1.00 65.32 C
ATOM 19 O4 U B2176 75.578 39.401 94.611 1.00 67.15 O
ATOM 20 C5 U B2176 76.849 38.145 96.163 1.00 65.88 C
ATOM 21 C6 U B2176 77.654 38.219 97.218 1.00 64.58 C
ATOM 22 P C B2177 81.231 39.400 102.691 1.00 67.51 P
ATOM 23 OP1 C B2177 82.210 38.379 102.240 1.00 67.33 O
ATOM 24 OP2 C B2177 80.628 39.297 104.045 1.00 67.21 O
ATOM 25 O5' C B2177 81.923 40.823 102.550 1.00 68.54 O
TER
Atoms:
C2: (78.405,44.777,103.429)
OP1: (82.210,38.379,102.240)
OP2: (80.628,39.297,104.045)
C4: (77.375,43.201,104.802)
O5': (81.923,40.823,102.550)
C3': (82.203,43.657,102.295)
C1': (79.979,44.072,101.638)
O4': (80.419,42.872,101.007)
C5': (82.291,41.330,101.249)
P: (81.231,39.400,102.691)
O2: (78.606,45.951,103.075)
C4': (81.867,42.774,101.109)
C2': (81.227,44.812,102.130)
O2': (81.635,45.753,101.160)
N1: (79.053,43.731,102.741)
N3: (77.577,44.477,104.458)
N4: (76.553,42.954,105.827)
C6: (78.828,42.429,103.100)
C5: (78.006,42.122,104.113)
O3': (83.559,44.057,102.305)
OP1: (82.210,38.379,102.240)
OP2: (80.628,39.297,104.045)
C4: (77.375,43.201,104.802)
O5': (81.923,40.823,102.550)
C3': (82.203,43.657,102.295)
C1': (79.979,44.072,101.638)
O4': (80.419,42.872,101.007)
C5': (82.291,41.330,101.249)
P: (81.231,39.400,102.691)
O2: (78.606,45.951,103.075)
C4': (81.867,42.774,101.109)
C2': (81.227,44.812,102.130)
O2': (81.635,45.753,101.160)
N1: (79.053,43.731,102.741)
N3: (77.577,44.477,104.458)
N4: (76.553,42.954,105.827)
C6: (78.828,42.429,103.100)
C5: (78.006,42.122,104.113)
O3': (83.559,44.057,102.305)
C4: (76.346,39.342,95.571)
N3: (76.772,40.507,96.173)
OP1: (80.298,33.878,99.835)
OP2: (78.315,34.193,98.233)
C2: (77.604,40.618,97.254)
C1': (78.910,39.444,98.956)
C3': (79.727,38.314,100.848)
O5': (79.758,36.110,98.885)
O4': (80.169,38.921,98.590)
C5': (80.989,36.753,99.258)
P: (79.700,34.538,98.647)
C4': (80.723,38.169,99.703)
C2': (78.423,38.572,100.109)
O2': (77.469,39.268,100.879)
N1: (78.036,39.411,97.778)
O4: (75.578,39.401,94.611)
O2: (77.936,41.704,97.706)
C6: (77.654,38.219,97.218)
C5: (76.849,38.145,96.163)
O3': (80.059,39.468,101.601)
N3: (76.772,40.507,96.173)
OP1: (80.298,33.878,99.835)
OP2: (78.315,34.193,98.233)
C2: (77.604,40.618,97.254)
C1': (78.910,39.444,98.956)
C3': (79.727,38.314,100.848)
O5': (79.758,36.110,98.885)
O4': (80.169,38.921,98.590)
C5': (80.989,36.753,99.258)
P: (79.700,34.538,98.647)
C4': (80.723,38.169,99.703)
C2': (78.423,38.572,100.109)
O2': (77.469,39.268,100.879)
N1: (78.036,39.411,97.778)
O4: (75.578,39.401,94.611)
O2: (77.936,41.704,97.706)
C6: (77.654,38.219,97.218)
C5: (76.849,38.145,96.163)
O3': (80.059,39.468,101.601)
Image (generated by PyMOL):