Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:01197:01196
Extra
PDB:
ATOM 1 O3' U A1196 39.479 110.895 126.077 1.00 46.80 O
ATOM 2 P C A1197 39.547 109.406 125.518 1.00 48.69 P
ATOM 3 OP1 C A1197 39.333 108.520 126.687 1.00 49.06 O
ATOM 4 OP2 C A1197 40.774 109.258 124.703 1.00 48.78 O
ATOM 5 O5' C A1197 38.279 109.341 124.555 1.00 48.62 O
ATOM 6 C5' C A1197 38.184 108.363 123.511 1.00 46.92 C
ATOM 7 C4' C A1197 36.911 107.560 123.654 1.00 46.62 C
ATOM 8 O4' C A1197 36.200 107.929 124.866 1.00 46.58 O
ATOM 9 C3' C A1197 35.856 107.780 122.591 1.00 46.17 C
ATOM 10 O3' C A1197 36.178 107.076 121.403 1.00 45.84 O
ATOM 11 C2' C A1197 34.628 107.170 123.260 1.00 45.81 C
ATOM 12 O2' C A1197 34.629 105.756 123.211 1.00 45.26 O
ATOM 13 C1' C A1197 34.824 107.611 124.713 1.00 45.52 C
ATOM 14 N1 C A1197 34.002 108.787 125.049 1.00 44.12 N
ATOM 15 C2 C A1197 32.622 108.608 125.180 1.00 43.81 C
ATOM 16 O2 C A1197 32.156 107.474 125.048 1.00 43.58 O
ATOM 17 N3 C A1197 31.833 109.673 125.439 1.00 43.21 N
ATOM 18 C4 C A1197 32.373 110.883 125.564 1.00 43.75 C
ATOM 19 N4 C A1197 31.551 111.905 125.781 1.00 45.11 N
ATOM 20 C5 C A1197 33.782 111.097 125.463 1.00 43.52 C
ATOM 21 C6 C A1197 34.554 110.029 125.210 1.00 43.79 C
ATOM 22 P G A1198 36.757 107.872 120.136 1.00 45.61 P
ATOM 23 OP1 G A1198 36.623 106.966 118.962 1.00 44.52 O
ATOM 24 OP2 G A1198 38.097 108.399 120.518 1.00 45.31 O
ATOM 25 O5' G A1198 35.781 109.119 119.954 1.00 43.44 O
TER
ATOM 1 O3' A B1195 43.791 115.447 125.719 1.00 41.32 O
ATOM 2 P U B1196 43.593 114.653 124.346 1.00 41.97 P
ATOM 3 OP1 U B1196 44.737 113.715 124.225 1.00 41.36 O
ATOM 4 OP2 U B1196 43.318 115.652 123.279 1.00 41.52 O
ATOM 5 O5' U B1196 42.280 113.797 124.584 1.00 42.67 O
ATOM 6 C5' U B1196 42.085 113.166 125.839 1.00 43.53 C
ATOM 7 C4' U B1196 40.623 112.958 126.109 1.00 44.39 C
ATOM 8 O4' U B1196 39.871 114.186 126.057 1.00 43.94 O
ATOM 9 C3' U B1196 39.859 111.967 125.239 1.00 44.70 C
ATOM 10 O3' U B1196 39.479 110.895 126.077 1.00 46.80 O
ATOM 11 C2' U B1196 38.645 112.770 124.757 1.00 44.31 C
ATOM 12 O2' U B1196 37.462 112.006 124.691 1.00 42.80 O
ATOM 13 C1' U B1196 38.531 113.845 125.829 1.00 43.83 C
ATOM 14 N1 U B1196 37.814 115.047 125.393 1.00 44.35 N
ATOM 15 C2 U B1196 36.661 115.370 126.064 1.00 44.86 C
ATOM 16 O2 U B1196 36.246 114.716 127.000 1.00 44.96 O
ATOM 17 N3 U B1196 36.011 116.486 125.597 1.00 45.02 N
ATOM 18 C4 U B1196 36.396 117.287 124.541 1.00 44.54 C
ATOM 19 O4 U B1196 35.632 118.160 124.134 1.00 44.08 O
ATOM 20 C5 U B1196 37.618 116.898 123.919 1.00 43.85 C
ATOM 21 C6 U B1196 38.269 115.817 124.354 1.00 44.08 C
ATOM 22 P C B1197 39.547 109.406 125.518 1.00 48.69 P
ATOM 23 OP1 C B1197 39.333 108.520 126.687 1.00 49.06 O
ATOM 24 OP2 C B1197 40.774 109.258 124.703 1.00 48.78 O
ATOM 25 O5' C B1197 38.279 109.341 124.555 1.00 48.62 O
TER
ATOM 2 P C A1197 39.547 109.406 125.518 1.00 48.69 P
ATOM 3 OP1 C A1197 39.333 108.520 126.687 1.00 49.06 O
ATOM 4 OP2 C A1197 40.774 109.258 124.703 1.00 48.78 O
ATOM 5 O5' C A1197 38.279 109.341 124.555 1.00 48.62 O
ATOM 6 C5' C A1197 38.184 108.363 123.511 1.00 46.92 C
ATOM 7 C4' C A1197 36.911 107.560 123.654 1.00 46.62 C
ATOM 8 O4' C A1197 36.200 107.929 124.866 1.00 46.58 O
ATOM 9 C3' C A1197 35.856 107.780 122.591 1.00 46.17 C
ATOM 10 O3' C A1197 36.178 107.076 121.403 1.00 45.84 O
ATOM 11 C2' C A1197 34.628 107.170 123.260 1.00 45.81 C
ATOM 12 O2' C A1197 34.629 105.756 123.211 1.00 45.26 O
ATOM 13 C1' C A1197 34.824 107.611 124.713 1.00 45.52 C
ATOM 14 N1 C A1197 34.002 108.787 125.049 1.00 44.12 N
ATOM 15 C2 C A1197 32.622 108.608 125.180 1.00 43.81 C
ATOM 16 O2 C A1197 32.156 107.474 125.048 1.00 43.58 O
ATOM 17 N3 C A1197 31.833 109.673 125.439 1.00 43.21 N
ATOM 18 C4 C A1197 32.373 110.883 125.564 1.00 43.75 C
ATOM 19 N4 C A1197 31.551 111.905 125.781 1.00 45.11 N
ATOM 20 C5 C A1197 33.782 111.097 125.463 1.00 43.52 C
ATOM 21 C6 C A1197 34.554 110.029 125.210 1.00 43.79 C
ATOM 22 P G A1198 36.757 107.872 120.136 1.00 45.61 P
ATOM 23 OP1 G A1198 36.623 106.966 118.962 1.00 44.52 O
ATOM 24 OP2 G A1198 38.097 108.399 120.518 1.00 45.31 O
ATOM 25 O5' G A1198 35.781 109.119 119.954 1.00 43.44 O
TER
ATOM 1 O3' A B1195 43.791 115.447 125.719 1.00 41.32 O
ATOM 2 P U B1196 43.593 114.653 124.346 1.00 41.97 P
ATOM 3 OP1 U B1196 44.737 113.715 124.225 1.00 41.36 O
ATOM 4 OP2 U B1196 43.318 115.652 123.279 1.00 41.52 O
ATOM 5 O5' U B1196 42.280 113.797 124.584 1.00 42.67 O
ATOM 6 C5' U B1196 42.085 113.166 125.839 1.00 43.53 C
ATOM 7 C4' U B1196 40.623 112.958 126.109 1.00 44.39 C
ATOM 8 O4' U B1196 39.871 114.186 126.057 1.00 43.94 O
ATOM 9 C3' U B1196 39.859 111.967 125.239 1.00 44.70 C
ATOM 10 O3' U B1196 39.479 110.895 126.077 1.00 46.80 O
ATOM 11 C2' U B1196 38.645 112.770 124.757 1.00 44.31 C
ATOM 12 O2' U B1196 37.462 112.006 124.691 1.00 42.80 O
ATOM 13 C1' U B1196 38.531 113.845 125.829 1.00 43.83 C
ATOM 14 N1 U B1196 37.814 115.047 125.393 1.00 44.35 N
ATOM 15 C2 U B1196 36.661 115.370 126.064 1.00 44.86 C
ATOM 16 O2 U B1196 36.246 114.716 127.000 1.00 44.96 O
ATOM 17 N3 U B1196 36.011 116.486 125.597 1.00 45.02 N
ATOM 18 C4 U B1196 36.396 117.287 124.541 1.00 44.54 C
ATOM 19 O4 U B1196 35.632 118.160 124.134 1.00 44.08 O
ATOM 20 C5 U B1196 37.618 116.898 123.919 1.00 43.85 C
ATOM 21 C6 U B1196 38.269 115.817 124.354 1.00 44.08 C
ATOM 22 P C B1197 39.547 109.406 125.518 1.00 48.69 P
ATOM 23 OP1 C B1197 39.333 108.520 126.687 1.00 49.06 O
ATOM 24 OP2 C B1197 40.774 109.258 124.703 1.00 48.78 O
ATOM 25 O5' C B1197 38.279 109.341 124.555 1.00 48.62 O
TER
Atoms:
C2: (32.622,108.608,125.180)
OP1: (39.333,108.520,126.687)
OP2: (40.774,109.258,124.703)
C4: (32.373,110.883,125.564)
O5': (38.279,109.341,124.555)
C3': (35.856,107.780,122.591)
C1': (34.824,107.611,124.713)
O4': (36.200,107.929,124.866)
C5': (38.184,108.363,123.511)
P: (39.547,109.406,125.518)
O2: (32.156,107.474,125.048)
C4': (36.911,107.560,123.654)
C2': (34.628,107.170,123.260)
O2': (34.629,105.756,123.211)
N1: (34.002,108.787,125.049)
N3: (31.833,109.673,125.439)
N4: (31.551,111.905,125.781)
C6: (34.554,110.029,125.210)
C5: (33.782,111.097,125.463)
O3': (36.178,107.076,121.403)
OP1: (39.333,108.520,126.687)
OP2: (40.774,109.258,124.703)
C4: (32.373,110.883,125.564)
O5': (38.279,109.341,124.555)
C3': (35.856,107.780,122.591)
C1': (34.824,107.611,124.713)
O4': (36.200,107.929,124.866)
C5': (38.184,108.363,123.511)
P: (39.547,109.406,125.518)
O2: (32.156,107.474,125.048)
C4': (36.911,107.560,123.654)
C2': (34.628,107.170,123.260)
O2': (34.629,105.756,123.211)
N1: (34.002,108.787,125.049)
N3: (31.833,109.673,125.439)
N4: (31.551,111.905,125.781)
C6: (34.554,110.029,125.210)
C5: (33.782,111.097,125.463)
O3': (36.178,107.076,121.403)
C4: (36.396,117.287,124.541)
N3: (36.011,116.486,125.597)
OP1: (44.737,113.715,124.225)
OP2: (43.318,115.652,123.279)
C2: (36.661,115.370,126.064)
C1': (38.531,113.845,125.829)
C3': (39.859,111.967,125.239)
O5': (42.280,113.797,124.584)
O4': (39.871,114.186,126.057)
C5': (42.085,113.166,125.839)
P: (43.593,114.653,124.346)
C4': (40.623,112.958,126.109)
C2': (38.645,112.770,124.757)
O2': (37.462,112.006,124.691)
N1: (37.814,115.047,125.393)
O4: (35.632,118.160,124.134)
O2: (36.246,114.716,127.000)
C6: (38.269,115.817,124.354)
C5: (37.618,116.898,123.919)
O3': (39.479,110.895,126.077)
N3: (36.011,116.486,125.597)
OP1: (44.737,113.715,124.225)
OP2: (43.318,115.652,123.279)
C2: (36.661,115.370,126.064)
C1': (38.531,113.845,125.829)
C3': (39.859,111.967,125.239)
O5': (42.280,113.797,124.584)
O4': (39.871,114.186,126.057)
C5': (42.085,113.166,125.839)
P: (43.593,114.653,124.346)
C4': (40.623,112.958,126.109)
C2': (38.645,112.770,124.757)
O2': (37.462,112.006,124.691)
N1: (37.814,115.047,125.393)
O4: (35.632,118.160,124.134)
O2: (36.246,114.716,127.000)
C6: (38.269,115.817,124.354)
C5: (37.618,116.898,123.919)
O3': (39.479,110.895,126.077)
Image (generated by PyMOL):