Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NPQ:C36:C35
Extra
PDB:
ATOM 1 O3' U A 35 8.866 -19.440 40.530 1.00 48.87 O
ATOM 2 P C A 36 7.620 -19.180 39.560 1.00 53.63 P
ATOM 3 OP1 C A 36 8.048 -18.221 38.519 1.00 65.62 O
ATOM 4 OP2 C A 36 6.439 -18.877 40.396 1.00 47.75 O
ATOM 5 O5' C A 36 7.383 -20.608 38.880 1.00 44.56 O
ATOM 6 C5' C A 36 8.408 -21.223 38.116 1.00 53.52 C
ATOM 7 C4' C A 36 8.067 -22.683 37.882 1.00 51.37 C
ATOM 8 O4' C A 36 8.235 -23.426 39.117 1.00 44.50 O
ATOM 9 C3' C A 36 6.624 -22.943 37.472 1.00 46.52 C
ATOM 10 O3' C A 36 6.468 -22.822 36.065 1.00 61.81 O
ATOM 11 C2' C A 36 6.435 -24.378 37.946 1.00 41.60 C
ATOM 12 O2' C A 36 7.069 -25.316 37.100 1.00 42.79 O
ATOM 13 C1' C A 36 7.150 -24.318 39.291 1.00 36.75 C
ATOM 14 N1 C A 36 6.289 -23.809 40.399 1.00 37.95 N
ATOM 15 C2 C A 36 5.355 -24.660 40.999 1.00 35.48 C
ATOM 16 O2 C A 36 5.259 -25.826 40.598 1.00 36.79 O
ATOM 17 N3 C A 36 4.582 -24.179 42.004 1.00 30.26 N
ATOM 18 C4 C A 36 4.717 -22.914 42.407 1.00 29.13 C
ATOM 19 N4 C A 36 3.933 -22.484 43.401 1.00 32.91 N
ATOM 20 C5 C A 36 5.663 -22.032 41.808 1.00 34.56 C
ATOM 21 C6 C A 36 6.418 -22.519 40.820 1.00 41.17 C
ATOM 22 P C A 37 5.213 -22.011 35.490 1.00 55.36 P
ATOM 23 OP1 C A 37 5.584 -21.467 34.165 1.00 67.79 O
ATOM 24 OP2 C A 37 4.743 -21.100 36.557 1.00 57.58 O
ATOM 25 O5' C A 37 4.107 -23.151 35.296 1.00 37.91 O
TER
ATOM 1 O3' G B 34 6.546 -16.108 44.292 1.00 39.54 O
ATOM 2 P U B 35 6.575 -17.549 44.985 1.00 29.02 P
ATOM 3 OP1 U B 35 5.184 -18.048 45.048 1.00 33.44 O
ATOM 4 OP2 U B 35 7.374 -17.438 46.226 1.00 26.37 O
ATOM 5 O5' U B 35 7.394 -18.442 43.940 1.00 33.74 O
ATOM 6 C5' U B 35 8.657 -18.004 43.456 1.00 28.37 C
ATOM 7 C4' U B 35 9.434 -19.158 42.852 1.00 34.67 C
ATOM 8 O4' U B 35 9.801 -20.089 43.901 1.00 30.45 O
ATOM 9 C3' U B 35 8.663 -19.979 41.829 1.00 39.13 C
ATOM 10 O3' U B 35 8.866 -19.440 40.530 1.00 48.87 O
ATOM 11 C2' U B 35 9.311 -21.352 41.967 1.00 37.56 C
ATOM 12 O2' U B 35 10.516 -21.453 41.235 1.00 42.68 O
ATOM 13 C1' U B 35 9.598 -21.419 43.465 1.00 31.68 C
ATOM 14 N1 U B 35 8.490 -22.007 44.271 1.00 28.82 N
ATOM 15 C2 U B 35 8.152 -23.356 44.118 1.00 25.40 C
ATOM 16 O2 U B 35 8.777 -24.050 43.307 1.00 33.27 O
ATOM 17 N3 U B 35 7.142 -23.866 44.864 1.00 19.93 N
ATOM 18 C4 U B 35 6.489 -23.090 45.730 1.00 18.51 C
ATOM 19 O4 U B 35 5.501 -23.641 46.442 1.00 16.06 O
ATOM 20 C5 U B 35 6.820 -21.714 45.902 1.00 20.46 C
ATOM 21 C6 U B 35 7.817 -21.222 45.160 1.00 26.05 C
ATOM 22 P C B 36 7.620 -19.180 39.560 1.00 53.63 P
ATOM 23 OP1 C B 36 8.048 -18.221 38.519 1.00 65.62 O
ATOM 24 OP2 C B 36 6.439 -18.877 40.396 1.00 47.75 O
ATOM 25 O5' C B 36 7.383 -20.608 38.880 1.00 44.56 O
TER
ATOM 2 P C A 36 7.620 -19.180 39.560 1.00 53.63 P
ATOM 3 OP1 C A 36 8.048 -18.221 38.519 1.00 65.62 O
ATOM 4 OP2 C A 36 6.439 -18.877 40.396 1.00 47.75 O
ATOM 5 O5' C A 36 7.383 -20.608 38.880 1.00 44.56 O
ATOM 6 C5' C A 36 8.408 -21.223 38.116 1.00 53.52 C
ATOM 7 C4' C A 36 8.067 -22.683 37.882 1.00 51.37 C
ATOM 8 O4' C A 36 8.235 -23.426 39.117 1.00 44.50 O
ATOM 9 C3' C A 36 6.624 -22.943 37.472 1.00 46.52 C
ATOM 10 O3' C A 36 6.468 -22.822 36.065 1.00 61.81 O
ATOM 11 C2' C A 36 6.435 -24.378 37.946 1.00 41.60 C
ATOM 12 O2' C A 36 7.069 -25.316 37.100 1.00 42.79 O
ATOM 13 C1' C A 36 7.150 -24.318 39.291 1.00 36.75 C
ATOM 14 N1 C A 36 6.289 -23.809 40.399 1.00 37.95 N
ATOM 15 C2 C A 36 5.355 -24.660 40.999 1.00 35.48 C
ATOM 16 O2 C A 36 5.259 -25.826 40.598 1.00 36.79 O
ATOM 17 N3 C A 36 4.582 -24.179 42.004 1.00 30.26 N
ATOM 18 C4 C A 36 4.717 -22.914 42.407 1.00 29.13 C
ATOM 19 N4 C A 36 3.933 -22.484 43.401 1.00 32.91 N
ATOM 20 C5 C A 36 5.663 -22.032 41.808 1.00 34.56 C
ATOM 21 C6 C A 36 6.418 -22.519 40.820 1.00 41.17 C
ATOM 22 P C A 37 5.213 -22.011 35.490 1.00 55.36 P
ATOM 23 OP1 C A 37 5.584 -21.467 34.165 1.00 67.79 O
ATOM 24 OP2 C A 37 4.743 -21.100 36.557 1.00 57.58 O
ATOM 25 O5' C A 37 4.107 -23.151 35.296 1.00 37.91 O
TER
ATOM 1 O3' G B 34 6.546 -16.108 44.292 1.00 39.54 O
ATOM 2 P U B 35 6.575 -17.549 44.985 1.00 29.02 P
ATOM 3 OP1 U B 35 5.184 -18.048 45.048 1.00 33.44 O
ATOM 4 OP2 U B 35 7.374 -17.438 46.226 1.00 26.37 O
ATOM 5 O5' U B 35 7.394 -18.442 43.940 1.00 33.74 O
ATOM 6 C5' U B 35 8.657 -18.004 43.456 1.00 28.37 C
ATOM 7 C4' U B 35 9.434 -19.158 42.852 1.00 34.67 C
ATOM 8 O4' U B 35 9.801 -20.089 43.901 1.00 30.45 O
ATOM 9 C3' U B 35 8.663 -19.979 41.829 1.00 39.13 C
ATOM 10 O3' U B 35 8.866 -19.440 40.530 1.00 48.87 O
ATOM 11 C2' U B 35 9.311 -21.352 41.967 1.00 37.56 C
ATOM 12 O2' U B 35 10.516 -21.453 41.235 1.00 42.68 O
ATOM 13 C1' U B 35 9.598 -21.419 43.465 1.00 31.68 C
ATOM 14 N1 U B 35 8.490 -22.007 44.271 1.00 28.82 N
ATOM 15 C2 U B 35 8.152 -23.356 44.118 1.00 25.40 C
ATOM 16 O2 U B 35 8.777 -24.050 43.307 1.00 33.27 O
ATOM 17 N3 U B 35 7.142 -23.866 44.864 1.00 19.93 N
ATOM 18 C4 U B 35 6.489 -23.090 45.730 1.00 18.51 C
ATOM 19 O4 U B 35 5.501 -23.641 46.442 1.00 16.06 O
ATOM 20 C5 U B 35 6.820 -21.714 45.902 1.00 20.46 C
ATOM 21 C6 U B 35 7.817 -21.222 45.160 1.00 26.05 C
ATOM 22 P C B 36 7.620 -19.180 39.560 1.00 53.63 P
ATOM 23 OP1 C B 36 8.048 -18.221 38.519 1.00 65.62 O
ATOM 24 OP2 C B 36 6.439 -18.877 40.396 1.00 47.75 O
ATOM 25 O5' C B 36 7.383 -20.608 38.880 1.00 44.56 O
TER
Atoms:
C2: (5.355,-24.660,40.999)
OP1: (8.048,-18.221,38.519)
OP2: (6.439,-18.877,40.396)
C4: (4.717,-22.914,42.407)
O5': (7.383,-20.608,38.880)
C3': (6.624,-22.943,37.472)
C1': (7.150,-24.318,39.291)
O4': (8.235,-23.426,39.117)
C5': (8.408,-21.223,38.116)
P: (7.620,-19.180,39.560)
O2: (5.259,-25.826,40.598)
C4': (8.067,-22.683,37.882)
C2': (6.435,-24.378,37.946)
O2': (7.069,-25.316,37.100)
N1: (6.289,-23.809,40.399)
N3: (4.582,-24.179,42.004)
N4: (3.933,-22.484,43.401)
C6: (6.418,-22.519,40.820)
C5: (5.663,-22.032,41.808)
O3': (6.468,-22.822,36.065)
OP1: (8.048,-18.221,38.519)
OP2: (6.439,-18.877,40.396)
C4: (4.717,-22.914,42.407)
O5': (7.383,-20.608,38.880)
C3': (6.624,-22.943,37.472)
C1': (7.150,-24.318,39.291)
O4': (8.235,-23.426,39.117)
C5': (8.408,-21.223,38.116)
P: (7.620,-19.180,39.560)
O2: (5.259,-25.826,40.598)
C4': (8.067,-22.683,37.882)
C2': (6.435,-24.378,37.946)
O2': (7.069,-25.316,37.100)
N1: (6.289,-23.809,40.399)
N3: (4.582,-24.179,42.004)
N4: (3.933,-22.484,43.401)
C6: (6.418,-22.519,40.820)
C5: (5.663,-22.032,41.808)
O3': (6.468,-22.822,36.065)
C4: (6.489,-23.090,45.730)
N3: (7.142,-23.866,44.864)
OP1: (5.184,-18.048,45.048)
OP2: (7.374,-17.438,46.226)
C2: (8.152,-23.356,44.118)
C1': (9.598,-21.419,43.465)
C3': (8.663,-19.979,41.829)
O5': (7.394,-18.442,43.940)
O4': (9.801,-20.089,43.901)
C5': (8.657,-18.004,43.456)
P: (6.575,-17.549,44.985)
C4': (9.434,-19.158,42.852)
C2': (9.311,-21.352,41.967)
O2': (10.516,-21.453,41.235)
N1: (8.490,-22.007,44.271)
O4: (5.501,-23.641,46.442)
O2: (8.777,-24.050,43.307)
C6: (7.817,-21.222,45.160)
C5: (6.820,-21.714,45.902)
O3': (8.866,-19.440,40.530)
N3: (7.142,-23.866,44.864)
OP1: (5.184,-18.048,45.048)
OP2: (7.374,-17.438,46.226)
C2: (8.152,-23.356,44.118)
C1': (9.598,-21.419,43.465)
C3': (8.663,-19.979,41.829)
O5': (7.394,-18.442,43.940)
O4': (9.801,-20.089,43.901)
C5': (8.657,-18.004,43.456)
P: (6.575,-17.549,44.985)
C4': (9.434,-19.158,42.852)
C2': (9.311,-21.352,41.967)
O2': (10.516,-21.453,41.235)
N1: (8.490,-22.007,44.271)
O4: (5.501,-23.641,46.442)
O2: (8.777,-24.050,43.307)
C6: (7.817,-21.222,45.160)
C5: (6.820,-21.714,45.902)
O3': (8.866,-19.440,40.530)
Image (generated by PyMOL):