Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01197:01196
Extra
PDB:
ATOM 1 O3' U A1196 39.494 111.383 126.345 1.00 40.21 O
ATOM 2 P C A1197 39.547 109.874 125.815 1.00 42.02 P
ATOM 3 OP1 C A1197 39.336 108.983 126.986 1.00 40.67 O
ATOM 4 OP2 C A1197 40.767 109.716 124.986 1.00 43.44 O
ATOM 5 O5' C A1197 38.262 109.794 124.877 1.00 40.45 O
ATOM 6 C5' C A1197 38.187 108.863 123.797 1.00 37.17 C
ATOM 7 C4' C A1197 36.934 108.033 123.908 1.00 36.57 C
ATOM 8 O4' C A1197 36.191 108.376 125.108 1.00 35.72 O
ATOM 9 C3' C A1197 35.912 108.234 122.807 1.00 35.90 C
ATOM 10 O3' C A1197 36.276 107.523 121.633 1.00 36.31 O
ATOM 11 C2' C A1197 34.653 107.649 123.440 1.00 35.24 C
ATOM 12 O2' C A1197 34.607 106.232 123.390 1.00 33.89 O
ATOM 13 C1' C A1197 34.811 108.109 124.894 1.00 33.80 C
ATOM 14 N1 C A1197 34.013 109.311 125.217 1.00 31.88 N
ATOM 15 C2 C A1197 32.631 109.163 125.382 1.00 30.58 C
ATOM 16 O2 C A1197 32.133 108.043 125.261 1.00 31.54 O
ATOM 17 N3 C A1197 31.875 110.242 125.662 1.00 29.23 N
ATOM 18 C4 C A1197 32.443 111.439 125.776 1.00 30.21 C
ATOM 19 N4 C A1197 31.647 112.478 126.036 1.00 30.58 N
ATOM 20 C5 C A1197 33.852 111.625 125.625 1.00 29.48 C
ATOM 21 C6 C A1197 34.592 110.543 125.350 1.00 30.94 C
ATOM 22 P G A1198 36.836 108.320 120.359 1.00 35.95 P
ATOM 23 OP1 G A1198 36.716 107.395 119.201 1.00 37.32 O
ATOM 24 OP2 G A1198 38.159 108.892 120.719 1.00 35.68 O
ATOM 25 O5' G A1198 35.827 109.533 120.152 1.00 33.69 O
TER
ATOM 1 O3' A B1195 43.867 115.799 125.970 1.00 31.94 O
ATOM 2 P U B1196 43.669 115.012 124.591 1.00 35.37 P
ATOM 3 OP1 U B1196 44.823 114.078 124.456 1.00 33.67 O
ATOM 4 OP2 U B1196 43.390 116.022 123.533 1.00 34.88 O
ATOM 5 O5' U B1196 42.337 114.173 124.802 1.00 35.51 O
ATOM 6 C5' U B1196 42.033 113.630 126.084 1.00 37.58 C
ATOM 7 C4' U B1196 40.543 113.492 126.268 1.00 38.12 C
ATOM 8 O4' U B1196 39.810 114.723 126.118 1.00 36.69 O
ATOM 9 C3' U B1196 39.779 112.454 125.455 1.00 37.65 C
ATOM 10 O3' U B1196 39.494 111.383 126.345 1.00 40.21 O
ATOM 11 C2' U B1196 38.528 113.219 124.989 1.00 36.70 C
ATOM 12 O2' U B1196 37.342 112.455 125.017 1.00 36.61 O
ATOM 13 C1' U B1196 38.460 114.368 125.989 1.00 36.69 C
ATOM 14 N1 U B1196 37.693 115.543 125.551 1.00 37.19 N
ATOM 15 C2 U B1196 36.542 115.853 126.258 1.00 37.01 C
ATOM 16 O2 U B1196 36.152 115.198 127.207 1.00 36.69 O
ATOM 17 N3 U B1196 35.859 116.955 125.804 1.00 36.59 N
ATOM 18 C4 U B1196 36.195 117.758 124.732 1.00 35.96 C
ATOM 19 O4 U B1196 35.437 118.673 124.395 1.00 33.99 O
ATOM 20 C5 U B1196 37.399 117.376 124.059 1.00 36.13 C
ATOM 21 C6 U B1196 38.090 116.310 124.481 1.00 36.28 C
ATOM 22 P C B1197 39.547 109.874 125.815 1.00 42.02 P
ATOM 23 OP1 C B1197 39.336 108.983 126.986 1.00 40.67 O
ATOM 24 OP2 C B1197 40.767 109.716 124.986 1.00 43.44 O
ATOM 25 O5' C B1197 38.262 109.794 124.877 1.00 40.45 O
TER
ATOM 2 P C A1197 39.547 109.874 125.815 1.00 42.02 P
ATOM 3 OP1 C A1197 39.336 108.983 126.986 1.00 40.67 O
ATOM 4 OP2 C A1197 40.767 109.716 124.986 1.00 43.44 O
ATOM 5 O5' C A1197 38.262 109.794 124.877 1.00 40.45 O
ATOM 6 C5' C A1197 38.187 108.863 123.797 1.00 37.17 C
ATOM 7 C4' C A1197 36.934 108.033 123.908 1.00 36.57 C
ATOM 8 O4' C A1197 36.191 108.376 125.108 1.00 35.72 O
ATOM 9 C3' C A1197 35.912 108.234 122.807 1.00 35.90 C
ATOM 10 O3' C A1197 36.276 107.523 121.633 1.00 36.31 O
ATOM 11 C2' C A1197 34.653 107.649 123.440 1.00 35.24 C
ATOM 12 O2' C A1197 34.607 106.232 123.390 1.00 33.89 O
ATOM 13 C1' C A1197 34.811 108.109 124.894 1.00 33.80 C
ATOM 14 N1 C A1197 34.013 109.311 125.217 1.00 31.88 N
ATOM 15 C2 C A1197 32.631 109.163 125.382 1.00 30.58 C
ATOM 16 O2 C A1197 32.133 108.043 125.261 1.00 31.54 O
ATOM 17 N3 C A1197 31.875 110.242 125.662 1.00 29.23 N
ATOM 18 C4 C A1197 32.443 111.439 125.776 1.00 30.21 C
ATOM 19 N4 C A1197 31.647 112.478 126.036 1.00 30.58 N
ATOM 20 C5 C A1197 33.852 111.625 125.625 1.00 29.48 C
ATOM 21 C6 C A1197 34.592 110.543 125.350 1.00 30.94 C
ATOM 22 P G A1198 36.836 108.320 120.359 1.00 35.95 P
ATOM 23 OP1 G A1198 36.716 107.395 119.201 1.00 37.32 O
ATOM 24 OP2 G A1198 38.159 108.892 120.719 1.00 35.68 O
ATOM 25 O5' G A1198 35.827 109.533 120.152 1.00 33.69 O
TER
ATOM 1 O3' A B1195 43.867 115.799 125.970 1.00 31.94 O
ATOM 2 P U B1196 43.669 115.012 124.591 1.00 35.37 P
ATOM 3 OP1 U B1196 44.823 114.078 124.456 1.00 33.67 O
ATOM 4 OP2 U B1196 43.390 116.022 123.533 1.00 34.88 O
ATOM 5 O5' U B1196 42.337 114.173 124.802 1.00 35.51 O
ATOM 6 C5' U B1196 42.033 113.630 126.084 1.00 37.58 C
ATOM 7 C4' U B1196 40.543 113.492 126.268 1.00 38.12 C
ATOM 8 O4' U B1196 39.810 114.723 126.118 1.00 36.69 O
ATOM 9 C3' U B1196 39.779 112.454 125.455 1.00 37.65 C
ATOM 10 O3' U B1196 39.494 111.383 126.345 1.00 40.21 O
ATOM 11 C2' U B1196 38.528 113.219 124.989 1.00 36.70 C
ATOM 12 O2' U B1196 37.342 112.455 125.017 1.00 36.61 O
ATOM 13 C1' U B1196 38.460 114.368 125.989 1.00 36.69 C
ATOM 14 N1 U B1196 37.693 115.543 125.551 1.00 37.19 N
ATOM 15 C2 U B1196 36.542 115.853 126.258 1.00 37.01 C
ATOM 16 O2 U B1196 36.152 115.198 127.207 1.00 36.69 O
ATOM 17 N3 U B1196 35.859 116.955 125.804 1.00 36.59 N
ATOM 18 C4 U B1196 36.195 117.758 124.732 1.00 35.96 C
ATOM 19 O4 U B1196 35.437 118.673 124.395 1.00 33.99 O
ATOM 20 C5 U B1196 37.399 117.376 124.059 1.00 36.13 C
ATOM 21 C6 U B1196 38.090 116.310 124.481 1.00 36.28 C
ATOM 22 P C B1197 39.547 109.874 125.815 1.00 42.02 P
ATOM 23 OP1 C B1197 39.336 108.983 126.986 1.00 40.67 O
ATOM 24 OP2 C B1197 40.767 109.716 124.986 1.00 43.44 O
ATOM 25 O5' C B1197 38.262 109.794 124.877 1.00 40.45 O
TER
Atoms:
C2: (32.631,109.163,125.382)
OP1: (39.336,108.983,126.986)
OP2: (40.767,109.716,124.986)
C4: (32.443,111.439,125.776)
O5': (38.262,109.794,124.877)
C3': (35.912,108.234,122.807)
C1': (34.811,108.109,124.894)
O4': (36.191,108.376,125.108)
C5': (38.187,108.863,123.797)
P: (39.547,109.874,125.815)
O2: (32.133,108.043,125.261)
C4': (36.934,108.033,123.908)
C2': (34.653,107.649,123.440)
O2': (34.607,106.232,123.390)
N1: (34.013,109.311,125.217)
N3: (31.875,110.242,125.662)
N4: (31.647,112.478,126.036)
C6: (34.592,110.543,125.350)
C5: (33.852,111.625,125.625)
O3': (36.276,107.523,121.633)
OP1: (39.336,108.983,126.986)
OP2: (40.767,109.716,124.986)
C4: (32.443,111.439,125.776)
O5': (38.262,109.794,124.877)
C3': (35.912,108.234,122.807)
C1': (34.811,108.109,124.894)
O4': (36.191,108.376,125.108)
C5': (38.187,108.863,123.797)
P: (39.547,109.874,125.815)
O2: (32.133,108.043,125.261)
C4': (36.934,108.033,123.908)
C2': (34.653,107.649,123.440)
O2': (34.607,106.232,123.390)
N1: (34.013,109.311,125.217)
N3: (31.875,110.242,125.662)
N4: (31.647,112.478,126.036)
C6: (34.592,110.543,125.350)
C5: (33.852,111.625,125.625)
O3': (36.276,107.523,121.633)
C4: (36.195,117.758,124.732)
N3: (35.859,116.955,125.804)
OP1: (44.823,114.078,124.456)
OP2: (43.390,116.022,123.533)
C2: (36.542,115.853,126.258)
C1': (38.460,114.368,125.989)
C3': (39.779,112.454,125.455)
O5': (42.337,114.173,124.802)
O4': (39.810,114.723,126.118)
C5': (42.033,113.630,126.084)
P: (43.669,115.012,124.591)
C4': (40.543,113.492,126.268)
C2': (38.528,113.219,124.989)
O2': (37.342,112.455,125.017)
N1: (37.693,115.543,125.551)
O4: (35.437,118.673,124.395)
O2: (36.152,115.198,127.207)
C6: (38.090,116.310,124.481)
C5: (37.399,117.376,124.059)
O3': (39.494,111.383,126.345)
N3: (35.859,116.955,125.804)
OP1: (44.823,114.078,124.456)
OP2: (43.390,116.022,123.533)
C2: (36.542,115.853,126.258)
C1': (38.460,114.368,125.989)
C3': (39.779,112.454,125.455)
O5': (42.337,114.173,124.802)
O4': (39.810,114.723,126.118)
C5': (42.033,113.630,126.084)
P: (43.669,115.012,124.591)
C4': (40.543,113.492,126.268)
C2': (38.528,113.219,124.989)
O2': (37.342,112.455,125.017)
N1: (37.693,115.543,125.551)
O4: (35.437,118.673,124.395)
O2: (36.152,115.198,127.207)
C6: (38.090,116.310,124.481)
C5: (37.399,117.376,124.059)
O3': (39.494,111.383,126.345)
Image (generated by PyMOL):