Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:X61:X60
Extra
PDB:
ATOM 1 O3' U A 60 123.426 -20.536 -22.561 1.00 89.26 O
ATOM 2 P C A 61 122.566 -21.889 -22.682 1.00 90.10 P
ATOM 3 OP1 C A 61 121.525 -21.680 -23.722 1.00 90.03 O
ATOM 4 OP2 C A 61 122.167 -22.281 -21.302 1.00 90.55 O
ATOM 5 O5' C A 61 123.603 -22.973 -23.216 1.00 90.79 O
ATOM 6 C5' C A 61 123.407 -23.627 -24.466 1.00 91.36 C
ATOM 7 C4' C A 61 124.172 -24.929 -24.494 1.00 92.29 C
ATOM 8 O4' C A 61 125.600 -24.657 -24.426 1.00 92.88 O
ATOM 9 C3' C A 61 123.912 -25.877 -23.333 1.00 92.49 C
ATOM 10 O3' C A 61 122.763 -26.691 -23.544 1.00 92.08 O
ATOM 11 C2' C A 61 125.185 -26.712 -23.292 1.00 92.86 C
ATOM 12 O2' C A 61 125.157 -27.768 -24.234 1.00 93.01 O
ATOM 13 C1' C A 61 126.253 -25.684 -23.687 1.00 92.89 C
ATOM 14 N1 C A 61 126.956 -25.077 -22.527 1.00 92.67 N
ATOM 15 C2 C A 61 127.586 -25.925 -21.583 1.00 92.36 C
ATOM 16 O2 C A 61 127.565 -27.155 -21.755 1.00 91.78 O
ATOM 17 N3 C A 61 128.198 -25.377 -20.512 1.00 91.94 N
ATOM 18 C4 C A 61 128.206 -24.053 -20.351 1.00 91.50 C
ATOM 19 N4 C A 61 128.802 -23.567 -19.263 1.00 91.73 N
ATOM 20 C5 C A 61 127.597 -23.171 -21.294 1.00 91.25 C
ATOM 21 C6 C A 61 126.992 -23.719 -22.355 1.00 91.78 C
ATOM 22 P C A 62 121.976 -27.300 -22.278 1.00 91.74 P
ATOM 23 OP1 C A 62 120.659 -27.801 -22.752 1.00 91.92 O
ATOM 24 OP2 C A 62 122.037 -26.286 -21.185 1.00 91.47 O
ATOM 25 O5' C A 62 122.844 -28.553 -21.816 1.00 91.02 O
TER
ATOM 1 O3' A B 59 126.794 -19.608 -16.847 1.00 91.21 O
ATOM 2 P U B 60 126.479 -20.932 -17.690 1.00 93.03 P
ATOM 3 OP1 U B 60 125.436 -21.677 -16.935 1.00 93.88 O
ATOM 4 OP2 U B 60 127.778 -21.586 -17.984 1.00 92.61 O
ATOM 5 O5' U B 60 125.853 -20.396 -19.061 1.00 92.54 O
ATOM 6 C5' U B 60 124.518 -19.870 -19.110 1.00 90.70 C
ATOM 7 C4' U B 60 124.147 -19.469 -20.525 1.00 88.67 C
ATOM 8 O4' U B 60 124.759 -18.201 -20.887 1.00 87.07 O
ATOM 9 C3' U B 60 124.502 -20.460 -21.630 1.00 88.31 C
ATOM 10 O3' U B 60 123.426 -20.536 -22.561 1.00 89.26 O
ATOM 11 C2' U B 60 125.707 -19.806 -22.300 1.00 87.29 C
ATOM 12 O2' U B 60 125.861 -20.147 -23.662 1.00 87.24 O
ATOM 13 C1' U B 60 125.362 -18.325 -22.154 1.00 87.12 C
ATOM 14 N1 U B 60 126.486 -17.378 -22.263 1.00 87.52 N
ATOM 15 C2 U B 60 126.198 -16.073 -22.654 1.00 86.90 C
ATOM 16 O2 U B 60 125.068 -15.680 -22.881 1.00 86.40 O
ATOM 17 N3 U B 60 127.288 -15.243 -22.764 1.00 86.84 N
ATOM 18 C4 U B 60 128.609 -15.564 -22.518 1.00 86.76 C
ATOM 19 O4 U B 60 129.471 -14.689 -22.592 1.00 85.46 O
ATOM 20 C5 U B 60 128.826 -16.919 -22.117 1.00 87.09 C
ATOM 21 C6 U B 60 127.786 -17.758 -22.003 1.00 87.65 C
ATOM 22 P C B 61 122.566 -21.889 -22.682 1.00 90.10 P
ATOM 23 OP1 C B 61 121.525 -21.680 -23.722 1.00 90.03 O
ATOM 24 OP2 C B 61 122.167 -22.281 -21.302 1.00 90.55 O
ATOM 25 O5' C B 61 123.603 -22.973 -23.216 1.00 90.79 O
TER
ATOM 2 P C A 61 122.566 -21.889 -22.682 1.00 90.10 P
ATOM 3 OP1 C A 61 121.525 -21.680 -23.722 1.00 90.03 O
ATOM 4 OP2 C A 61 122.167 -22.281 -21.302 1.00 90.55 O
ATOM 5 O5' C A 61 123.603 -22.973 -23.216 1.00 90.79 O
ATOM 6 C5' C A 61 123.407 -23.627 -24.466 1.00 91.36 C
ATOM 7 C4' C A 61 124.172 -24.929 -24.494 1.00 92.29 C
ATOM 8 O4' C A 61 125.600 -24.657 -24.426 1.00 92.88 O
ATOM 9 C3' C A 61 123.912 -25.877 -23.333 1.00 92.49 C
ATOM 10 O3' C A 61 122.763 -26.691 -23.544 1.00 92.08 O
ATOM 11 C2' C A 61 125.185 -26.712 -23.292 1.00 92.86 C
ATOM 12 O2' C A 61 125.157 -27.768 -24.234 1.00 93.01 O
ATOM 13 C1' C A 61 126.253 -25.684 -23.687 1.00 92.89 C
ATOM 14 N1 C A 61 126.956 -25.077 -22.527 1.00 92.67 N
ATOM 15 C2 C A 61 127.586 -25.925 -21.583 1.00 92.36 C
ATOM 16 O2 C A 61 127.565 -27.155 -21.755 1.00 91.78 O
ATOM 17 N3 C A 61 128.198 -25.377 -20.512 1.00 91.94 N
ATOM 18 C4 C A 61 128.206 -24.053 -20.351 1.00 91.50 C
ATOM 19 N4 C A 61 128.802 -23.567 -19.263 1.00 91.73 N
ATOM 20 C5 C A 61 127.597 -23.171 -21.294 1.00 91.25 C
ATOM 21 C6 C A 61 126.992 -23.719 -22.355 1.00 91.78 C
ATOM 22 P C A 62 121.976 -27.300 -22.278 1.00 91.74 P
ATOM 23 OP1 C A 62 120.659 -27.801 -22.752 1.00 91.92 O
ATOM 24 OP2 C A 62 122.037 -26.286 -21.185 1.00 91.47 O
ATOM 25 O5' C A 62 122.844 -28.553 -21.816 1.00 91.02 O
TER
ATOM 1 O3' A B 59 126.794 -19.608 -16.847 1.00 91.21 O
ATOM 2 P U B 60 126.479 -20.932 -17.690 1.00 93.03 P
ATOM 3 OP1 U B 60 125.436 -21.677 -16.935 1.00 93.88 O
ATOM 4 OP2 U B 60 127.778 -21.586 -17.984 1.00 92.61 O
ATOM 5 O5' U B 60 125.853 -20.396 -19.061 1.00 92.54 O
ATOM 6 C5' U B 60 124.518 -19.870 -19.110 1.00 90.70 C
ATOM 7 C4' U B 60 124.147 -19.469 -20.525 1.00 88.67 C
ATOM 8 O4' U B 60 124.759 -18.201 -20.887 1.00 87.07 O
ATOM 9 C3' U B 60 124.502 -20.460 -21.630 1.00 88.31 C
ATOM 10 O3' U B 60 123.426 -20.536 -22.561 1.00 89.26 O
ATOM 11 C2' U B 60 125.707 -19.806 -22.300 1.00 87.29 C
ATOM 12 O2' U B 60 125.861 -20.147 -23.662 1.00 87.24 O
ATOM 13 C1' U B 60 125.362 -18.325 -22.154 1.00 87.12 C
ATOM 14 N1 U B 60 126.486 -17.378 -22.263 1.00 87.52 N
ATOM 15 C2 U B 60 126.198 -16.073 -22.654 1.00 86.90 C
ATOM 16 O2 U B 60 125.068 -15.680 -22.881 1.00 86.40 O
ATOM 17 N3 U B 60 127.288 -15.243 -22.764 1.00 86.84 N
ATOM 18 C4 U B 60 128.609 -15.564 -22.518 1.00 86.76 C
ATOM 19 O4 U B 60 129.471 -14.689 -22.592 1.00 85.46 O
ATOM 20 C5 U B 60 128.826 -16.919 -22.117 1.00 87.09 C
ATOM 21 C6 U B 60 127.786 -17.758 -22.003 1.00 87.65 C
ATOM 22 P C B 61 122.566 -21.889 -22.682 1.00 90.10 P
ATOM 23 OP1 C B 61 121.525 -21.680 -23.722 1.00 90.03 O
ATOM 24 OP2 C B 61 122.167 -22.281 -21.302 1.00 90.55 O
ATOM 25 O5' C B 61 123.603 -22.973 -23.216 1.00 90.79 O
TER
Atoms:
C2: (127.586,-25.925,-21.583)
OP1: (121.525,-21.680,-23.722)
OP2: (122.167,-22.281,-21.302)
C4: (128.206,-24.053,-20.351)
O5': (123.603,-22.973,-23.216)
C3': (123.912,-25.877,-23.333)
C1': (126.253,-25.684,-23.687)
O4': (125.600,-24.657,-24.426)
C5': (123.407,-23.627,-24.466)
P: (122.566,-21.889,-22.682)
O2: (127.565,-27.155,-21.755)
C4': (124.172,-24.929,-24.494)
C2': (125.185,-26.712,-23.292)
O2': (125.157,-27.768,-24.234)
N1: (126.956,-25.077,-22.527)
N3: (128.198,-25.377,-20.512)
N4: (128.802,-23.567,-19.263)
C6: (126.992,-23.719,-22.355)
C5: (127.597,-23.171,-21.294)
O3': (122.763,-26.691,-23.544)
OP1: (121.525,-21.680,-23.722)
OP2: (122.167,-22.281,-21.302)
C4: (128.206,-24.053,-20.351)
O5': (123.603,-22.973,-23.216)
C3': (123.912,-25.877,-23.333)
C1': (126.253,-25.684,-23.687)
O4': (125.600,-24.657,-24.426)
C5': (123.407,-23.627,-24.466)
P: (122.566,-21.889,-22.682)
O2: (127.565,-27.155,-21.755)
C4': (124.172,-24.929,-24.494)
C2': (125.185,-26.712,-23.292)
O2': (125.157,-27.768,-24.234)
N1: (126.956,-25.077,-22.527)
N3: (128.198,-25.377,-20.512)
N4: (128.802,-23.567,-19.263)
C6: (126.992,-23.719,-22.355)
C5: (127.597,-23.171,-21.294)
O3': (122.763,-26.691,-23.544)
C4: (128.609,-15.564,-22.518)
N3: (127.288,-15.243,-22.764)
OP1: (125.436,-21.677,-16.935)
OP2: (127.778,-21.586,-17.984)
C2: (126.198,-16.073,-22.654)
C1': (125.362,-18.325,-22.154)
C3': (124.502,-20.460,-21.630)
O5': (125.853,-20.396,-19.061)
O4': (124.759,-18.201,-20.887)
C5': (124.518,-19.870,-19.110)
P: (126.479,-20.932,-17.690)
C4': (124.147,-19.469,-20.525)
C2': (125.707,-19.806,-22.300)
O2': (125.861,-20.147,-23.662)
N1: (126.486,-17.378,-22.263)
O4: (129.471,-14.689,-22.592)
O2: (125.068,-15.680,-22.881)
C6: (127.786,-17.758,-22.003)
C5: (128.826,-16.919,-22.117)
O3': (123.426,-20.536,-22.561)
N3: (127.288,-15.243,-22.764)
OP1: (125.436,-21.677,-16.935)
OP2: (127.778,-21.586,-17.984)
C2: (126.198,-16.073,-22.654)
C1': (125.362,-18.325,-22.154)
C3': (124.502,-20.460,-21.630)
O5': (125.853,-20.396,-19.061)
O4': (124.759,-18.201,-20.887)
C5': (124.518,-19.870,-19.110)
P: (126.479,-20.932,-17.690)
C4': (124.147,-19.469,-20.525)
C2': (125.707,-19.806,-22.300)
O2': (125.861,-20.147,-23.662)
N1: (126.486,-17.378,-22.263)
O4: (129.471,-14.689,-22.592)
O2: (125.068,-15.680,-22.881)
C6: (127.786,-17.758,-22.003)
C5: (128.826,-16.919,-22.117)
O3': (123.426,-20.536,-22.561)
Image (generated by PyMOL):