Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:928:927
Extra
PDB:
ATOM 1 O3' U A 27 70.364 17.536 101.514 1.00 68.13 O
ATOM 2 P C A 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 3 OP1 C A 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 4 OP2 C A 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 5 O5' C A 28 72.707 16.750 101.828 1.00 68.77 O
ATOM 6 C5' C A 28 72.931 17.528 103.023 1.00 69.92 C
ATOM 7 C4' C A 28 72.841 16.658 104.257 1.00 71.58 C
ATOM 8 O4' C A 28 71.581 15.929 104.251 1.00 71.72 O
ATOM 9 C3' C A 28 73.889 15.565 104.396 1.00 72.07 C
ATOM 10 O3' C A 28 75.123 16.060 104.913 1.00 72.83 O
ATOM 11 C2' C A 28 73.217 14.601 105.365 1.00 71.18 C
ATOM 12 O2' C A 28 73.290 15.031 106.711 1.00 69.89 O
ATOM 13 C1' C A 28 71.762 14.671 104.894 1.00 71.89 C
ATOM 14 N1 C A 28 71.389 13.581 103.965 1.00 71.24 N
ATOM 15 C2 C A 28 71.306 12.268 104.460 1.00 70.08 C
ATOM 16 O2 C A 28 71.568 12.052 105.652 1.00 68.86 O
ATOM 17 N3 C A 28 70.947 11.268 103.625 1.00 70.46 N
ATOM 18 C4 C A 28 70.680 11.529 102.346 1.00 70.60 C
ATOM 19 N4 C A 28 70.321 10.509 101.567 1.00 70.63 N
ATOM 20 C5 C A 28 70.766 12.847 101.811 1.00 71.35 C
ATOM 21 C6 C A 28 71.120 13.834 102.647 1.00 72.09 C
ATOM 22 P C A 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 23 OP1 C A 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 24 OP2 C A 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 25 O5' C A 29 76.313 13.967 104.090 1.00 75.50 O
TER
ATOM 1 O3' C B 26 64.801 16.701 97.720 1.00 70.22 O
ATOM 2 P U B 27 66.364 16.404 97.587 1.00 69.93 P
ATOM 3 OP1 U B 27 66.821 16.946 96.283 1.00 70.89 O
ATOM 4 OP2 U B 27 66.590 14.972 97.904 1.00 71.41 O
ATOM 5 O5' U B 27 66.974 17.270 98.768 1.00 67.73 O
ATOM 6 C5' U B 27 68.212 16.920 99.354 1.00 66.35 C
ATOM 7 C4' U B 27 68.129 17.061 100.846 1.00 66.84 C
ATOM 8 O4' U B 27 67.044 16.254 101.369 1.00 67.65 O
ATOM 9 C3' U B 27 69.364 16.535 101.538 1.00 66.97 C
ATOM 10 O3' U B 27 70.364 17.536 101.514 1.00 68.13 O
ATOM 11 C2' U B 27 68.846 16.181 102.922 1.00 66.18 C
ATOM 12 O2' U B 27 68.730 17.300 103.774 1.00 65.33 O
ATOM 13 C1' U B 27 67.451 15.633 102.584 1.00 67.81 C
ATOM 14 N1 U B 27 67.386 14.166 102.407 1.00 68.52 N
ATOM 15 C2 U B 27 67.885 13.351 103.425 1.00 68.74 C
ATOM 16 O2 U B 27 68.370 13.789 104.460 1.00 68.09 O
ATOM 17 N3 U B 27 67.801 11.999 103.182 1.00 68.82 N
ATOM 18 C4 U B 27 67.290 11.381 102.060 1.00 68.64 C
ATOM 19 O4 U B 27 67.344 10.152 101.970 1.00 67.01 O
ATOM 20 C5 U B 27 66.787 12.277 101.062 1.00 68.59 C
ATOM 21 C6 U B 27 66.848 13.602 101.262 1.00 68.64 C
ATOM 22 P C B 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 23 OP1 C B 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 24 OP2 C B 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 25 O5' C B 28 72.707 16.750 101.828 1.00 68.77 O
TER
ATOM 2 P C A 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 3 OP1 C A 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 4 OP2 C A 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 5 O5' C A 28 72.707 16.750 101.828 1.00 68.77 O
ATOM 6 C5' C A 28 72.931 17.528 103.023 1.00 69.92 C
ATOM 7 C4' C A 28 72.841 16.658 104.257 1.00 71.58 C
ATOM 8 O4' C A 28 71.581 15.929 104.251 1.00 71.72 O
ATOM 9 C3' C A 28 73.889 15.565 104.396 1.00 72.07 C
ATOM 10 O3' C A 28 75.123 16.060 104.913 1.00 72.83 O
ATOM 11 C2' C A 28 73.217 14.601 105.365 1.00 71.18 C
ATOM 12 O2' C A 28 73.290 15.031 106.711 1.00 69.89 O
ATOM 13 C1' C A 28 71.762 14.671 104.894 1.00 71.89 C
ATOM 14 N1 C A 28 71.389 13.581 103.965 1.00 71.24 N
ATOM 15 C2 C A 28 71.306 12.268 104.460 1.00 70.08 C
ATOM 16 O2 C A 28 71.568 12.052 105.652 1.00 68.86 O
ATOM 17 N3 C A 28 70.947 11.268 103.625 1.00 70.46 N
ATOM 18 C4 C A 28 70.680 11.529 102.346 1.00 70.60 C
ATOM 19 N4 C A 28 70.321 10.509 101.567 1.00 70.63 N
ATOM 20 C5 C A 28 70.766 12.847 101.811 1.00 71.35 C
ATOM 21 C6 C A 28 71.120 13.834 102.647 1.00 72.09 C
ATOM 22 P C A 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 23 OP1 C A 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 24 OP2 C A 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 25 O5' C A 29 76.313 13.967 104.090 1.00 75.50 O
TER
ATOM 1 O3' C B 26 64.801 16.701 97.720 1.00 70.22 O
ATOM 2 P U B 27 66.364 16.404 97.587 1.00 69.93 P
ATOM 3 OP1 U B 27 66.821 16.946 96.283 1.00 70.89 O
ATOM 4 OP2 U B 27 66.590 14.972 97.904 1.00 71.41 O
ATOM 5 O5' U B 27 66.974 17.270 98.768 1.00 67.73 O
ATOM 6 C5' U B 27 68.212 16.920 99.354 1.00 66.35 C
ATOM 7 C4' U B 27 68.129 17.061 100.846 1.00 66.84 C
ATOM 8 O4' U B 27 67.044 16.254 101.369 1.00 67.65 O
ATOM 9 C3' U B 27 69.364 16.535 101.538 1.00 66.97 C
ATOM 10 O3' U B 27 70.364 17.536 101.514 1.00 68.13 O
ATOM 11 C2' U B 27 68.846 16.181 102.922 1.00 66.18 C
ATOM 12 O2' U B 27 68.730 17.300 103.774 1.00 65.33 O
ATOM 13 C1' U B 27 67.451 15.633 102.584 1.00 67.81 C
ATOM 14 N1 U B 27 67.386 14.166 102.407 1.00 68.52 N
ATOM 15 C2 U B 27 67.885 13.351 103.425 1.00 68.74 C
ATOM 16 O2 U B 27 68.370 13.789 104.460 1.00 68.09 O
ATOM 17 N3 U B 27 67.801 11.999 103.182 1.00 68.82 N
ATOM 18 C4 U B 27 67.290 11.381 102.060 1.00 68.64 C
ATOM 19 O4 U B 27 67.344 10.152 101.970 1.00 67.01 O
ATOM 20 C5 U B 27 66.787 12.277 101.062 1.00 68.59 C
ATOM 21 C6 U B 27 66.848 13.602 101.262 1.00 68.64 C
ATOM 22 P C B 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 23 OP1 C B 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 24 OP2 C B 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 25 O5' C B 28 72.707 16.750 101.828 1.00 68.77 O
TER
Atoms:
C2: (71.306,12.268,104.460)
OP1: (72.197,18.607,100.243)
OP2: (71.487,16.213,99.696)
C4: (70.680,11.529,102.346)
O5': (72.707,16.750,101.828)
C3': (73.889,15.565,104.396)
C1': (71.762,14.671,104.894)
O4': (71.581,15.929,104.251)
C5': (72.931,17.528,103.023)
P: (71.719,17.284,100.696)
O2: (71.568,12.052,105.652)
C4': (72.841,16.658,104.257)
C2': (73.217,14.601,105.365)
O2': (73.290,15.031,106.711)
N1: (71.389,13.581,103.965)
N3: (70.947,11.268,103.625)
N4: (70.321,10.509,101.567)
C6: (71.120,13.834,102.647)
C5: (70.766,12.847,101.811)
O3': (75.123,16.060,104.913)
OP1: (72.197,18.607,100.243)
OP2: (71.487,16.213,99.696)
C4: (70.680,11.529,102.346)
O5': (72.707,16.750,101.828)
C3': (73.889,15.565,104.396)
C1': (71.762,14.671,104.894)
O4': (71.581,15.929,104.251)
C5': (72.931,17.528,103.023)
P: (71.719,17.284,100.696)
O2: (71.568,12.052,105.652)
C4': (72.841,16.658,104.257)
C2': (73.217,14.601,105.365)
O2': (73.290,15.031,106.711)
N1: (71.389,13.581,103.965)
N3: (70.947,11.268,103.625)
N4: (70.321,10.509,101.567)
C6: (71.120,13.834,102.647)
C5: (70.766,12.847,101.811)
O3': (75.123,16.060,104.913)
C4: (67.290,11.381,102.060)
N3: (67.801,11.999,103.182)
OP1: (66.821,16.946,96.283)
OP2: (66.590,14.972,97.904)
C2: (67.885,13.351,103.425)
C1': (67.451,15.633,102.584)
C3': (69.364,16.535,101.538)
O5': (66.974,17.270,98.768)
O4': (67.044,16.254,101.369)
C5': (68.212,16.920,99.354)
P: (66.364,16.404,97.587)
C4': (68.129,17.061,100.846)
C2': (68.846,16.181,102.922)
O2': (68.730,17.300,103.774)
N1: (67.386,14.166,102.407)
O4: (67.344,10.152,101.970)
O2: (68.370,13.789,104.460)
C6: (66.848,13.602,101.262)
C5: (66.787,12.277,101.062)
O3': (70.364,17.536,101.514)
N3: (67.801,11.999,103.182)
OP1: (66.821,16.946,96.283)
OP2: (66.590,14.972,97.904)
C2: (67.885,13.351,103.425)
C1': (67.451,15.633,102.584)
C3': (69.364,16.535,101.538)
O5': (66.974,17.270,98.768)
O4': (67.044,16.254,101.369)
C5': (68.212,16.920,99.354)
P: (66.364,16.404,97.587)
C4': (68.129,17.061,100.846)
C2': (68.846,16.181,102.922)
O2': (68.730,17.300,103.774)
N1: (67.386,14.166,102.407)
O4: (67.344,10.152,101.970)
O2: (68.370,13.789,104.460)
C6: (66.848,13.602,101.262)
C5: (66.787,12.277,101.062)
O3': (70.364,17.536,101.514)
Image (generated by PyMOL):