Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:Y14:Y13
Extra
PDB:
ATOM 1 O3' U A 13 -69.498 99.332 103.481 1.00 25.42 O
ATOM 2 P C A 14 -70.423 98.846 104.697 1.00 41.75 P
ATOM 3 OP1 C A 14 -70.537 99.968 105.658 1.00 37.35 O
ATOM 4 OP2 C A 14 -69.936 97.524 105.164 1.00 37.35 O
ATOM 5 O5' C A 14 -71.850 98.630 104.029 1.00 52.91 O
ATOM 6 C5' C A 14 -72.659 99.759 103.656 1.00 52.91 C
ATOM 7 C4' C A 14 -74.009 99.299 103.162 1.00 52.91 C
ATOM 8 O4' C A 14 -73.840 98.528 101.946 1.00 52.91 O
ATOM 9 C3' C A 14 -74.778 98.378 104.092 1.00 52.91 C
ATOM 10 O3' C A 14 -75.483 99.098 105.090 1.00 52.91 O
ATOM 11 C2' C A 14 -75.693 97.637 103.130 1.00 52.91 C
ATOM 12 O2' C A 14 -76.811 98.414 102.749 1.00 52.91 O
ATOM 13 C1' C A 14 -74.782 97.472 101.913 1.00 52.91 C
ATOM 14 N1 C A 14 -74.038 96.199 101.919 1.00 67.55 N
ATOM 15 C2 C A 14 -74.745 94.996 101.815 1.00 67.55 C
ATOM 16 O2 C A 14 -75.981 95.027 101.746 1.00 67.55 O
ATOM 17 N3 C A 14 -74.064 93.830 101.799 1.00 67.55 N
ATOM 18 C4 C A 14 -72.731 93.834 101.890 1.00 67.55 C
ATOM 19 N4 C A 14 -72.098 92.661 101.859 1.00 67.55 N
ATOM 20 C5 C A 14 -71.989 95.042 102.014 1.00 67.55 C
ATOM 21 C6 C A 14 -72.674 96.188 102.022 1.00 67.55 C
ATOM 22 P C A 15 -75.614 98.475 106.564 1.00 96.99 P
ATOM 23 OP1 C A 15 -76.133 99.549 107.446 1.00 99.36 O
ATOM 24 OP2 C A 15 -74.341 97.791 106.917 1.00 97.35 O
ATOM 25 O5' C A 15 -76.748 97.370 106.397 1.00 72.37 O
TER
ATOM 1 O3' A B 12 -64.133 96.436 102.807 1.00 24.79 O
ATOM 2 P U B 13 -65.403 96.566 103.775 1.00 44.67 P
ATOM 3 OP1 U B 13 -65.048 97.589 104.779 1.00 17.61 O
ATOM 4 OP2 U B 13 -65.828 95.232 104.229 1.00 17.61 O
ATOM 5 O5' U B 13 -66.545 97.129 102.825 1.00 25.42 O
ATOM 6 C5' U B 13 -66.553 98.505 102.407 1.00 25.42 C
ATOM 7 C4' U B 13 -67.862 98.834 101.731 1.00 25.42 C
ATOM 8 O4' U B 13 -67.943 98.120 100.467 1.00 25.42 O
ATOM 9 C3' U B 13 -69.085 98.386 102.510 1.00 25.42 C
ATOM 10 O3' U B 13 -69.498 99.332 103.481 1.00 25.42 O
ATOM 11 C2' U B 13 -70.128 98.162 101.423 1.00 25.42 C
ATOM 12 O2' U B 13 -70.816 99.354 101.081 1.00 25.42 O
ATOM 13 C1' U B 13 -69.266 97.648 100.260 1.00 25.42 C
ATOM 14 N1 U B 13 -69.220 96.177 100.160 1.00 44.09 N
ATOM 15 C2 U B 13 -70.194 95.534 99.407 1.00 44.09 C
ATOM 16 O2 U B 13 -71.067 96.127 98.789 1.00 44.09 O
ATOM 17 N3 U B 13 -70.104 94.165 99.397 1.00 44.09 N
ATOM 18 C4 U B 13 -69.160 93.394 100.026 1.00 44.09 C
ATOM 19 O4 U B 13 -69.192 92.176 99.890 1.00 44.09 O
ATOM 20 C5 U B 13 -68.184 94.124 100.760 1.00 44.09 C
ATOM 21 C6 U B 13 -68.244 95.453 100.802 1.00 44.09 C
ATOM 22 P C B 14 -70.423 98.846 104.697 1.00 41.75 P
ATOM 23 OP1 C B 14 -70.537 99.968 105.658 1.00 37.35 O
ATOM 24 OP2 C B 14 -69.936 97.524 105.164 1.00 37.35 O
ATOM 25 O5' C B 14 -71.850 98.630 104.029 1.00 52.91 O
TER
ATOM 2 P C A 14 -70.423 98.846 104.697 1.00 41.75 P
ATOM 3 OP1 C A 14 -70.537 99.968 105.658 1.00 37.35 O
ATOM 4 OP2 C A 14 -69.936 97.524 105.164 1.00 37.35 O
ATOM 5 O5' C A 14 -71.850 98.630 104.029 1.00 52.91 O
ATOM 6 C5' C A 14 -72.659 99.759 103.656 1.00 52.91 C
ATOM 7 C4' C A 14 -74.009 99.299 103.162 1.00 52.91 C
ATOM 8 O4' C A 14 -73.840 98.528 101.946 1.00 52.91 O
ATOM 9 C3' C A 14 -74.778 98.378 104.092 1.00 52.91 C
ATOM 10 O3' C A 14 -75.483 99.098 105.090 1.00 52.91 O
ATOM 11 C2' C A 14 -75.693 97.637 103.130 1.00 52.91 C
ATOM 12 O2' C A 14 -76.811 98.414 102.749 1.00 52.91 O
ATOM 13 C1' C A 14 -74.782 97.472 101.913 1.00 52.91 C
ATOM 14 N1 C A 14 -74.038 96.199 101.919 1.00 67.55 N
ATOM 15 C2 C A 14 -74.745 94.996 101.815 1.00 67.55 C
ATOM 16 O2 C A 14 -75.981 95.027 101.746 1.00 67.55 O
ATOM 17 N3 C A 14 -74.064 93.830 101.799 1.00 67.55 N
ATOM 18 C4 C A 14 -72.731 93.834 101.890 1.00 67.55 C
ATOM 19 N4 C A 14 -72.098 92.661 101.859 1.00 67.55 N
ATOM 20 C5 C A 14 -71.989 95.042 102.014 1.00 67.55 C
ATOM 21 C6 C A 14 -72.674 96.188 102.022 1.00 67.55 C
ATOM 22 P C A 15 -75.614 98.475 106.564 1.00 96.99 P
ATOM 23 OP1 C A 15 -76.133 99.549 107.446 1.00 99.36 O
ATOM 24 OP2 C A 15 -74.341 97.791 106.917 1.00 97.35 O
ATOM 25 O5' C A 15 -76.748 97.370 106.397 1.00 72.37 O
TER
ATOM 1 O3' A B 12 -64.133 96.436 102.807 1.00 24.79 O
ATOM 2 P U B 13 -65.403 96.566 103.775 1.00 44.67 P
ATOM 3 OP1 U B 13 -65.048 97.589 104.779 1.00 17.61 O
ATOM 4 OP2 U B 13 -65.828 95.232 104.229 1.00 17.61 O
ATOM 5 O5' U B 13 -66.545 97.129 102.825 1.00 25.42 O
ATOM 6 C5' U B 13 -66.553 98.505 102.407 1.00 25.42 C
ATOM 7 C4' U B 13 -67.862 98.834 101.731 1.00 25.42 C
ATOM 8 O4' U B 13 -67.943 98.120 100.467 1.00 25.42 O
ATOM 9 C3' U B 13 -69.085 98.386 102.510 1.00 25.42 C
ATOM 10 O3' U B 13 -69.498 99.332 103.481 1.00 25.42 O
ATOM 11 C2' U B 13 -70.128 98.162 101.423 1.00 25.42 C
ATOM 12 O2' U B 13 -70.816 99.354 101.081 1.00 25.42 O
ATOM 13 C1' U B 13 -69.266 97.648 100.260 1.00 25.42 C
ATOM 14 N1 U B 13 -69.220 96.177 100.160 1.00 44.09 N
ATOM 15 C2 U B 13 -70.194 95.534 99.407 1.00 44.09 C
ATOM 16 O2 U B 13 -71.067 96.127 98.789 1.00 44.09 O
ATOM 17 N3 U B 13 -70.104 94.165 99.397 1.00 44.09 N
ATOM 18 C4 U B 13 -69.160 93.394 100.026 1.00 44.09 C
ATOM 19 O4 U B 13 -69.192 92.176 99.890 1.00 44.09 O
ATOM 20 C5 U B 13 -68.184 94.124 100.760 1.00 44.09 C
ATOM 21 C6 U B 13 -68.244 95.453 100.802 1.00 44.09 C
ATOM 22 P C B 14 -70.423 98.846 104.697 1.00 41.75 P
ATOM 23 OP1 C B 14 -70.537 99.968 105.658 1.00 37.35 O
ATOM 24 OP2 C B 14 -69.936 97.524 105.164 1.00 37.35 O
ATOM 25 O5' C B 14 -71.850 98.630 104.029 1.00 52.91 O
TER
Atoms:
C2: (-74.745,94.996,101.815)
OP1: (-70.537,99.968,105.658)
OP2: (-69.936,97.524,105.164)
C4: (-72.731,93.834,101.890)
O5': (-71.850,98.630,104.029)
C3': (-74.778,98.378,104.092)
C1': (-74.782,97.472,101.913)
O4': (-73.840,98.528,101.946)
C5': (-72.659,99.759,103.656)
P: (-70.423,98.846,104.697)
O2: (-75.981,95.027,101.746)
C4': (-74.009,99.299,103.162)
C2': (-75.693,97.637,103.130)
O2': (-76.811,98.414,102.749)
N1: (-74.038,96.199,101.919)
N3: (-74.064,93.830,101.799)
N4: (-72.098,92.661,101.859)
C6: (-72.674,96.188,102.022)
C5: (-71.989,95.042,102.014)
O3': (-75.483,99.098,105.090)
OP1: (-70.537,99.968,105.658)
OP2: (-69.936,97.524,105.164)
C4: (-72.731,93.834,101.890)
O5': (-71.850,98.630,104.029)
C3': (-74.778,98.378,104.092)
C1': (-74.782,97.472,101.913)
O4': (-73.840,98.528,101.946)
C5': (-72.659,99.759,103.656)
P: (-70.423,98.846,104.697)
O2: (-75.981,95.027,101.746)
C4': (-74.009,99.299,103.162)
C2': (-75.693,97.637,103.130)
O2': (-76.811,98.414,102.749)
N1: (-74.038,96.199,101.919)
N3: (-74.064,93.830,101.799)
N4: (-72.098,92.661,101.859)
C6: (-72.674,96.188,102.022)
C5: (-71.989,95.042,102.014)
O3': (-75.483,99.098,105.090)
C4: (-69.160,93.394,100.026)
N3: (-70.104,94.165,99.397)
OP1: (-65.048,97.589,104.779)
OP2: (-65.828,95.232,104.229)
C2: (-70.194,95.534,99.407)
C1': (-69.266,97.648,100.260)
C3': (-69.085,98.386,102.510)
O5': (-66.545,97.129,102.825)
O4': (-67.943,98.120,100.467)
C5': (-66.553,98.505,102.407)
P: (-65.403,96.566,103.775)
C4': (-67.862,98.834,101.731)
C2': (-70.128,98.162,101.423)
O2': (-70.816,99.354,101.081)
N1: (-69.220,96.177,100.160)
O4: (-69.192,92.176,99.890)
O2: (-71.067,96.127,98.789)
C6: (-68.244,95.453,100.802)
C5: (-68.184,94.124,100.760)
O3': (-69.498,99.332,103.481)
N3: (-70.104,94.165,99.397)
OP1: (-65.048,97.589,104.779)
OP2: (-65.828,95.232,104.229)
C2: (-70.194,95.534,99.407)
C1': (-69.266,97.648,100.260)
C3': (-69.085,98.386,102.510)
O5': (-66.545,97.129,102.825)
O4': (-67.943,98.120,100.467)
C5': (-66.553,98.505,102.407)
P: (-65.403,96.566,103.775)
C4': (-67.862,98.834,101.731)
C2': (-70.128,98.162,101.423)
O2': (-70.816,99.354,101.081)
N1: (-69.220,96.177,100.160)
O4: (-69.192,92.176,99.890)
O2: (-71.067,96.127,98.789)
C6: (-68.244,95.453,100.802)
C5: (-68.184,94.124,100.760)
O3': (-69.498,99.332,103.481)
Image (generated by PyMOL):