Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:H53:H52
Extra
PDB:
ATOM 1 O3' U A 52 -19.737 64.692 95.741 1.00 65.99 O
ATOM 2 P C A 53 -19.886 65.168 97.271 1.00 63.27 P
ATOM 3 OP1 C A 53 -21.014 66.131 97.353 1.00 64.67 O
ATOM 4 OP2 C A 53 -18.538 65.575 97.741 1.00 63.59 O
ATOM 5 O5' C A 53 -20.290 63.844 98.055 1.00 62.36 O
ATOM 6 C5' C A 53 -19.652 62.609 97.762 1.00 60.61 C
ATOM 7 C4' C A 53 -20.619 61.466 97.935 1.00 59.93 C
ATOM 8 O4' C A 53 -21.865 61.772 97.267 1.00 57.49 O
ATOM 9 C3' C A 53 -20.160 60.159 97.316 1.00 59.39 C
ATOM 10 O3' C A 53 -19.319 59.469 98.235 1.00 63.13 O
ATOM 11 C2' C A 53 -21.477 59.423 97.078 1.00 57.46 C
ATOM 12 O2' C A 53 -21.926 58.722 98.221 1.00 54.57 O
ATOM 13 C1' C A 53 -22.438 60.578 96.772 1.00 56.43 C
ATOM 14 N1 C A 53 -22.762 60.778 95.353 1.00 55.06 N
ATOM 15 C2 C A 53 -23.584 59.849 94.713 1.00 55.54 C
ATOM 16 O2 C A 53 -23.995 58.872 95.355 1.00 56.31 O
ATOM 17 N3 C A 53 -23.911 60.038 93.414 1.00 56.05 N
ATOM 18 C4 C A 53 -23.446 61.103 92.759 1.00 56.97 C
ATOM 19 N4 C A 53 -23.800 61.255 91.481 1.00 58.34 N
ATOM 20 C5 C A 53 -22.599 62.062 93.385 1.00 56.27 C
ATOM 21 C6 C A 53 -22.283 61.860 94.670 1.00 55.51 C
ATOM 22 P G A 54 -17.727 59.458 98.007 1.00 64.60 P
ATOM 23 OP1 G A 54 -17.056 59.568 99.326 1.00 64.52 O
ATOM 24 OP2 G A 54 -17.421 60.449 96.943 1.00 63.99 O
ATOM 25 O5' G A 54 -17.439 58.006 97.426 1.00 65.78 O
TER
ATOM 1 O3' U B 51 -13.907 67.728 93.462 1.00 76.00 O
ATOM 2 P U B 52 -14.907 67.744 94.717 1.00 76.14 P
ATOM 3 OP1 U B 52 -15.327 69.152 94.944 1.00 77.32 O
ATOM 4 OP2 U B 52 -14.275 66.979 95.822 1.00 74.98 O
ATOM 5 O5' U B 52 -16.170 66.923 94.205 1.00 72.80 O
ATOM 6 C5' U B 52 -16.971 66.186 95.117 1.00 70.10 C
ATOM 7 C4' U B 52 -17.784 65.152 94.380 1.00 68.59 C
ATOM 8 O4' U B 52 -16.900 64.332 93.570 1.00 67.48 O
ATOM 9 C3' U B 52 -18.495 64.163 95.286 1.00 67.81 C
ATOM 10 O3' U B 52 -19.737 64.692 95.741 1.00 65.99 O
ATOM 11 C2' U B 52 -18.654 62.956 94.373 1.00 66.59 C
ATOM 12 O2' U B 52 -19.719 63.102 93.456 1.00 66.25 O
ATOM 13 C1' U B 52 -17.321 62.978 93.620 1.00 66.52 C
ATOM 14 N1 U B 52 -16.271 62.205 94.298 1.00 65.83 N
ATOM 15 C2 U B 52 -16.146 60.866 93.982 1.00 64.61 C
ATOM 16 O2 U B 52 -16.854 60.309 93.162 1.00 61.92 O
ATOM 17 N3 U B 52 -15.156 60.202 94.664 1.00 65.82 N
ATOM 18 C4 U B 52 -14.295 60.731 95.605 1.00 65.96 C
ATOM 19 O4 U B 52 -13.460 60.001 96.140 1.00 66.94 O
ATOM 20 C5 U B 52 -14.485 62.123 95.870 1.00 65.45 C
ATOM 21 C6 U B 52 -15.441 62.796 95.224 1.00 65.63 C
ATOM 22 P C B 53 -19.886 65.168 97.271 1.00 63.27 P
ATOM 23 OP1 C B 53 -21.014 66.131 97.353 1.00 64.67 O
ATOM 24 OP2 C B 53 -18.538 65.575 97.741 1.00 63.59 O
ATOM 25 O5' C B 53 -20.290 63.844 98.055 1.00 62.36 O
TER
ATOM 2 P C A 53 -19.886 65.168 97.271 1.00 63.27 P
ATOM 3 OP1 C A 53 -21.014 66.131 97.353 1.00 64.67 O
ATOM 4 OP2 C A 53 -18.538 65.575 97.741 1.00 63.59 O
ATOM 5 O5' C A 53 -20.290 63.844 98.055 1.00 62.36 O
ATOM 6 C5' C A 53 -19.652 62.609 97.762 1.00 60.61 C
ATOM 7 C4' C A 53 -20.619 61.466 97.935 1.00 59.93 C
ATOM 8 O4' C A 53 -21.865 61.772 97.267 1.00 57.49 O
ATOM 9 C3' C A 53 -20.160 60.159 97.316 1.00 59.39 C
ATOM 10 O3' C A 53 -19.319 59.469 98.235 1.00 63.13 O
ATOM 11 C2' C A 53 -21.477 59.423 97.078 1.00 57.46 C
ATOM 12 O2' C A 53 -21.926 58.722 98.221 1.00 54.57 O
ATOM 13 C1' C A 53 -22.438 60.578 96.772 1.00 56.43 C
ATOM 14 N1 C A 53 -22.762 60.778 95.353 1.00 55.06 N
ATOM 15 C2 C A 53 -23.584 59.849 94.713 1.00 55.54 C
ATOM 16 O2 C A 53 -23.995 58.872 95.355 1.00 56.31 O
ATOM 17 N3 C A 53 -23.911 60.038 93.414 1.00 56.05 N
ATOM 18 C4 C A 53 -23.446 61.103 92.759 1.00 56.97 C
ATOM 19 N4 C A 53 -23.800 61.255 91.481 1.00 58.34 N
ATOM 20 C5 C A 53 -22.599 62.062 93.385 1.00 56.27 C
ATOM 21 C6 C A 53 -22.283 61.860 94.670 1.00 55.51 C
ATOM 22 P G A 54 -17.727 59.458 98.007 1.00 64.60 P
ATOM 23 OP1 G A 54 -17.056 59.568 99.326 1.00 64.52 O
ATOM 24 OP2 G A 54 -17.421 60.449 96.943 1.00 63.99 O
ATOM 25 O5' G A 54 -17.439 58.006 97.426 1.00 65.78 O
TER
ATOM 1 O3' U B 51 -13.907 67.728 93.462 1.00 76.00 O
ATOM 2 P U B 52 -14.907 67.744 94.717 1.00 76.14 P
ATOM 3 OP1 U B 52 -15.327 69.152 94.944 1.00 77.32 O
ATOM 4 OP2 U B 52 -14.275 66.979 95.822 1.00 74.98 O
ATOM 5 O5' U B 52 -16.170 66.923 94.205 1.00 72.80 O
ATOM 6 C5' U B 52 -16.971 66.186 95.117 1.00 70.10 C
ATOM 7 C4' U B 52 -17.784 65.152 94.380 1.00 68.59 C
ATOM 8 O4' U B 52 -16.900 64.332 93.570 1.00 67.48 O
ATOM 9 C3' U B 52 -18.495 64.163 95.286 1.00 67.81 C
ATOM 10 O3' U B 52 -19.737 64.692 95.741 1.00 65.99 O
ATOM 11 C2' U B 52 -18.654 62.956 94.373 1.00 66.59 C
ATOM 12 O2' U B 52 -19.719 63.102 93.456 1.00 66.25 O
ATOM 13 C1' U B 52 -17.321 62.978 93.620 1.00 66.52 C
ATOM 14 N1 U B 52 -16.271 62.205 94.298 1.00 65.83 N
ATOM 15 C2 U B 52 -16.146 60.866 93.982 1.00 64.61 C
ATOM 16 O2 U B 52 -16.854 60.309 93.162 1.00 61.92 O
ATOM 17 N3 U B 52 -15.156 60.202 94.664 1.00 65.82 N
ATOM 18 C4 U B 52 -14.295 60.731 95.605 1.00 65.96 C
ATOM 19 O4 U B 52 -13.460 60.001 96.140 1.00 66.94 O
ATOM 20 C5 U B 52 -14.485 62.123 95.870 1.00 65.45 C
ATOM 21 C6 U B 52 -15.441 62.796 95.224 1.00 65.63 C
ATOM 22 P C B 53 -19.886 65.168 97.271 1.00 63.27 P
ATOM 23 OP1 C B 53 -21.014 66.131 97.353 1.00 64.67 O
ATOM 24 OP2 C B 53 -18.538 65.575 97.741 1.00 63.59 O
ATOM 25 O5' C B 53 -20.290 63.844 98.055 1.00 62.36 O
TER
Atoms:
C2: (-23.584,59.849,94.713)
OP1: (-21.014,66.131,97.353)
OP2: (-18.538,65.575,97.741)
C4: (-23.446,61.103,92.759)
O5': (-20.290,63.844,98.055)
C3': (-20.160,60.159,97.316)
C1': (-22.438,60.578,96.772)
O4': (-21.865,61.772,97.267)
C5': (-19.652,62.609,97.762)
P: (-19.886,65.168,97.271)
O2: (-23.995,58.872,95.355)
C4': (-20.619,61.466,97.935)
C2': (-21.477,59.423,97.078)
O2': (-21.926,58.722,98.221)
N1: (-22.762,60.778,95.353)
N3: (-23.911,60.038,93.414)
N4: (-23.800,61.255,91.481)
C6: (-22.283,61.860,94.670)
C5: (-22.599,62.062,93.385)
O3': (-19.319,59.469,98.235)
OP1: (-21.014,66.131,97.353)
OP2: (-18.538,65.575,97.741)
C4: (-23.446,61.103,92.759)
O5': (-20.290,63.844,98.055)
C3': (-20.160,60.159,97.316)
C1': (-22.438,60.578,96.772)
O4': (-21.865,61.772,97.267)
C5': (-19.652,62.609,97.762)
P: (-19.886,65.168,97.271)
O2: (-23.995,58.872,95.355)
C4': (-20.619,61.466,97.935)
C2': (-21.477,59.423,97.078)
O2': (-21.926,58.722,98.221)
N1: (-22.762,60.778,95.353)
N3: (-23.911,60.038,93.414)
N4: (-23.800,61.255,91.481)
C6: (-22.283,61.860,94.670)
C5: (-22.599,62.062,93.385)
O3': (-19.319,59.469,98.235)
C4: (-14.295,60.731,95.605)
N3: (-15.156,60.202,94.664)
OP1: (-15.327,69.152,94.944)
OP2: (-14.275,66.979,95.822)
C2: (-16.146,60.866,93.982)
C1': (-17.321,62.978,93.620)
C3': (-18.495,64.163,95.286)
O5': (-16.170,66.923,94.205)
O4': (-16.900,64.332,93.570)
C5': (-16.971,66.186,95.117)
P: (-14.907,67.744,94.717)
C4': (-17.784,65.152,94.380)
C2': (-18.654,62.956,94.373)
O2': (-19.719,63.102,93.456)
N1: (-16.271,62.205,94.298)
O4: (-13.460,60.001,96.140)
O2: (-16.854,60.309,93.162)
C6: (-15.441,62.796,95.224)
C5: (-14.485,62.123,95.870)
O3': (-19.737,64.692,95.741)
N3: (-15.156,60.202,94.664)
OP1: (-15.327,69.152,94.944)
OP2: (-14.275,66.979,95.822)
C2: (-16.146,60.866,93.982)
C1': (-17.321,62.978,93.620)
C3': (-18.495,64.163,95.286)
O5': (-16.170,66.923,94.205)
O4': (-16.900,64.332,93.570)
C5': (-16.971,66.186,95.117)
P: (-14.907,67.744,94.717)
C4': (-17.784,65.152,94.380)
C2': (-18.654,62.956,94.373)
O2': (-19.719,63.102,93.456)
N1: (-16.271,62.205,94.298)
O4: (-13.460,60.001,96.140)
O2: (-16.854,60.309,93.162)
C6: (-15.441,62.796,95.224)
C5: (-14.485,62.123,95.870)
O3': (-19.737,64.692,95.741)
Image (generated by PyMOL):