Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3TRA:A35:A34
Extra
PDB:
ATOM 1 O3' U A 34 -5.813 10.635 -32.471 1.00 30.78 O
ATOM 2 P C A 35 -4.878 10.186 -31.246 1.00 38.57 P
ATOM 3 OP1 C A 35 -5.548 9.071 -30.483 1.00 32.91 O
ATOM 4 OP2 C A 35 -4.727 11.417 -30.423 1.00 31.19 O
ATOM 5 O5' C A 35 -3.534 9.642 -31.888 1.00 31.59 O
ATOM 6 C5' C A 35 -3.172 8.242 -31.694 1.00 29.50 C
ATOM 7 C4' C A 35 -1.670 8.194 -31.888 1.00 30.64 C
ATOM 8 O4' C A 35 -1.345 8.813 -33.129 1.00 29.32 O
ATOM 9 C3' C A 35 -0.856 8.962 -30.857 1.00 31.11 C
ATOM 10 O3' C A 35 -0.621 8.248 -29.646 1.00 28.68 O
ATOM 11 C2' C A 35 0.446 9.241 -31.619 1.00 32.15 C
ATOM 12 O2' C A 35 1.236 8.065 -31.529 1.00 31.48 O
ATOM 13 C1' C A 35 -0.078 9.459 -33.025 1.00 28.76 C
ATOM 14 N1 C A 35 -0.193 10.914 -33.249 1.00 28.14 N
ATOM 15 C2 C A 35 0.953 11.574 -33.667 1.00 28.87 C
ATOM 16 O2 C A 35 2.008 10.975 -33.832 1.00 29.80 O
ATOM 17 N3 C A 35 0.862 12.920 -33.877 1.00 30.58 N
ATOM 18 C4 C A 35 -0.301 13.600 -33.712 1.00 31.03 C
ATOM 19 N4 C A 35 -0.314 14.919 -33.937 1.00 31.76 N
ATOM 20 C5 C A 35 -1.471 12.913 -33.279 1.00 30.01 C
ATOM 21 C6 C A 35 -1.363 11.587 -33.069 1.00 29.88 C
TER
ATOM 1 O3' G B 33 -8.689 14.899 -35.297 1.00 30.72 O
ATOM 2 P U B 34 -8.056 14.770 -33.817 1.00 41.38 P
ATOM 3 OP1 U B 34 -9.148 14.613 -32.800 1.00 33.43 O
ATOM 4 OP2 U B 34 -7.290 16.034 -33.653 1.00 33.21 O
ATOM 5 O5' U B 34 -7.146 13.464 -33.877 1.00 30.32 O
ATOM 6 C5' U B 34 -7.682 12.281 -34.520 1.00 30.52 C
ATOM 7 C4' U B 34 -6.518 11.329 -34.714 1.00 31.36 C
ATOM 8 O4' U B 34 -5.819 11.655 -35.910 1.00 31.51 O
ATOM 9 C3' U B 34 -5.439 11.376 -33.623 1.00 31.69 C
ATOM 10 O3' U B 34 -5.813 10.635 -32.471 1.00 30.78 O
ATOM 11 C2' U B 34 -4.227 10.819 -34.370 1.00 33.21 C
ATOM 12 O2' U B 34 -4.342 9.404 -34.355 1.00 33.89 O
ATOM 13 C1' U B 34 -4.420 11.370 -35.760 1.00 32.09 C
ATOM 14 N1 U B 34 -3.594 12.580 -35.970 1.00 33.46 N
ATOM 15 C2 U B 34 -2.309 12.362 -36.463 1.00 34.35 C
ATOM 16 O2 U B 34 -1.899 11.220 -36.687 1.00 34.78 O
ATOM 17 N3 U B 34 -1.513 13.450 -36.672 1.00 31.38 N
ATOM 18 C4 U B 34 -1.942 14.722 -36.418 1.00 31.78 C
ATOM 19 O4 U B 34 -1.122 15.660 -36.643 1.00 31.51 O
ATOM 20 C5 U B 34 -3.262 14.926 -35.925 1.00 31.43 C
ATOM 21 C6 U B 34 -4.028 13.845 -35.715 1.00 30.95 C
ATOM 22 P C B 35 -4.878 10.186 -31.246 1.00 38.57 P
ATOM 23 OP1 C B 35 -5.548 9.071 -30.483 1.00 32.91 O
ATOM 24 OP2 C B 35 -4.727 11.417 -30.423 1.00 31.19 O
ATOM 25 O5' C B 35 -3.534 9.642 -31.888 1.00 31.59 O
TER
ATOM 2 P C A 35 -4.878 10.186 -31.246 1.00 38.57 P
ATOM 3 OP1 C A 35 -5.548 9.071 -30.483 1.00 32.91 O
ATOM 4 OP2 C A 35 -4.727 11.417 -30.423 1.00 31.19 O
ATOM 5 O5' C A 35 -3.534 9.642 -31.888 1.00 31.59 O
ATOM 6 C5' C A 35 -3.172 8.242 -31.694 1.00 29.50 C
ATOM 7 C4' C A 35 -1.670 8.194 -31.888 1.00 30.64 C
ATOM 8 O4' C A 35 -1.345 8.813 -33.129 1.00 29.32 O
ATOM 9 C3' C A 35 -0.856 8.962 -30.857 1.00 31.11 C
ATOM 10 O3' C A 35 -0.621 8.248 -29.646 1.00 28.68 O
ATOM 11 C2' C A 35 0.446 9.241 -31.619 1.00 32.15 C
ATOM 12 O2' C A 35 1.236 8.065 -31.529 1.00 31.48 O
ATOM 13 C1' C A 35 -0.078 9.459 -33.025 1.00 28.76 C
ATOM 14 N1 C A 35 -0.193 10.914 -33.249 1.00 28.14 N
ATOM 15 C2 C A 35 0.953 11.574 -33.667 1.00 28.87 C
ATOM 16 O2 C A 35 2.008 10.975 -33.832 1.00 29.80 O
ATOM 17 N3 C A 35 0.862 12.920 -33.877 1.00 30.58 N
ATOM 18 C4 C A 35 -0.301 13.600 -33.712 1.00 31.03 C
ATOM 19 N4 C A 35 -0.314 14.919 -33.937 1.00 31.76 N
ATOM 20 C5 C A 35 -1.471 12.913 -33.279 1.00 30.01 C
ATOM 21 C6 C A 35 -1.363 11.587 -33.069 1.00 29.88 C
TER
ATOM 1 O3' G B 33 -8.689 14.899 -35.297 1.00 30.72 O
ATOM 2 P U B 34 -8.056 14.770 -33.817 1.00 41.38 P
ATOM 3 OP1 U B 34 -9.148 14.613 -32.800 1.00 33.43 O
ATOM 4 OP2 U B 34 -7.290 16.034 -33.653 1.00 33.21 O
ATOM 5 O5' U B 34 -7.146 13.464 -33.877 1.00 30.32 O
ATOM 6 C5' U B 34 -7.682 12.281 -34.520 1.00 30.52 C
ATOM 7 C4' U B 34 -6.518 11.329 -34.714 1.00 31.36 C
ATOM 8 O4' U B 34 -5.819 11.655 -35.910 1.00 31.51 O
ATOM 9 C3' U B 34 -5.439 11.376 -33.623 1.00 31.69 C
ATOM 10 O3' U B 34 -5.813 10.635 -32.471 1.00 30.78 O
ATOM 11 C2' U B 34 -4.227 10.819 -34.370 1.00 33.21 C
ATOM 12 O2' U B 34 -4.342 9.404 -34.355 1.00 33.89 O
ATOM 13 C1' U B 34 -4.420 11.370 -35.760 1.00 32.09 C
ATOM 14 N1 U B 34 -3.594 12.580 -35.970 1.00 33.46 N
ATOM 15 C2 U B 34 -2.309 12.362 -36.463 1.00 34.35 C
ATOM 16 O2 U B 34 -1.899 11.220 -36.687 1.00 34.78 O
ATOM 17 N3 U B 34 -1.513 13.450 -36.672 1.00 31.38 N
ATOM 18 C4 U B 34 -1.942 14.722 -36.418 1.00 31.78 C
ATOM 19 O4 U B 34 -1.122 15.660 -36.643 1.00 31.51 O
ATOM 20 C5 U B 34 -3.262 14.926 -35.925 1.00 31.43 C
ATOM 21 C6 U B 34 -4.028 13.845 -35.715 1.00 30.95 C
ATOM 22 P C B 35 -4.878 10.186 -31.246 1.00 38.57 P
ATOM 23 OP1 C B 35 -5.548 9.071 -30.483 1.00 32.91 O
ATOM 24 OP2 C B 35 -4.727 11.417 -30.423 1.00 31.19 O
ATOM 25 O5' C B 35 -3.534 9.642 -31.888 1.00 31.59 O
TER
Atoms:
C2: (0.953,11.574,-33.667)
OP1: (-5.548,9.071,-30.483)
OP2: (-4.727,11.417,-30.423)
C4: (-0.301,13.600,-33.712)
O5': (-3.534,9.642,-31.888)
C3': (-0.856,8.962,-30.857)
C1': (-0.078,9.459,-33.025)
O4': (-1.345,8.813,-33.129)
C5': (-3.172,8.242,-31.694)
P: (-4.878,10.186,-31.246)
O2: (2.008,10.975,-33.832)
C4': (-1.670,8.194,-31.888)
C2': (0.446,9.241,-31.619)
O2': (1.236,8.065,-31.529)
N1: (-0.193,10.914,-33.249)
N3: (0.862,12.920,-33.877)
N4: (-0.314,14.919,-33.937)
C6: (-1.363,11.587,-33.069)
C5: (-1.471,12.913,-33.279)
O3': (-0.621,8.248,-29.646)
OP1: (-5.548,9.071,-30.483)
OP2: (-4.727,11.417,-30.423)
C4: (-0.301,13.600,-33.712)
O5': (-3.534,9.642,-31.888)
C3': (-0.856,8.962,-30.857)
C1': (-0.078,9.459,-33.025)
O4': (-1.345,8.813,-33.129)
C5': (-3.172,8.242,-31.694)
P: (-4.878,10.186,-31.246)
O2: (2.008,10.975,-33.832)
C4': (-1.670,8.194,-31.888)
C2': (0.446,9.241,-31.619)
O2': (1.236,8.065,-31.529)
N1: (-0.193,10.914,-33.249)
N3: (0.862,12.920,-33.877)
N4: (-0.314,14.919,-33.937)
C6: (-1.363,11.587,-33.069)
C5: (-1.471,12.913,-33.279)
O3': (-0.621,8.248,-29.646)
C4: (-1.942,14.722,-36.418)
N3: (-1.513,13.450,-36.672)
OP1: (-9.148,14.613,-32.800)
OP2: (-7.290,16.034,-33.653)
C2: (-2.309,12.362,-36.463)
C1': (-4.420,11.370,-35.760)
C3': (-5.439,11.376,-33.623)
O5': (-7.146,13.464,-33.877)
O4': (-5.819,11.655,-35.910)
C5': (-7.682,12.281,-34.520)
P: (-8.056,14.770,-33.817)
C4': (-6.518,11.329,-34.714)
C2': (-4.227,10.819,-34.370)
O2': (-4.342,9.404,-34.355)
N1: (-3.594,12.580,-35.970)
O4: (-1.122,15.660,-36.643)
O2: (-1.899,11.220,-36.687)
C6: (-4.028,13.845,-35.715)
C5: (-3.262,14.926,-35.925)
O3': (-5.813,10.635,-32.471)
N3: (-1.513,13.450,-36.672)
OP1: (-9.148,14.613,-32.800)
OP2: (-7.290,16.034,-33.653)
C2: (-2.309,12.362,-36.463)
C1': (-4.420,11.370,-35.760)
C3': (-5.439,11.376,-33.623)
O5': (-7.146,13.464,-33.877)
O4': (-5.819,11.655,-35.910)
C5': (-7.682,12.281,-34.520)
P: (-8.056,14.770,-33.817)
C4': (-6.518,11.329,-34.714)
C2': (-4.227,10.819,-34.370)
O2': (-4.342,9.404,-34.355)
N1: (-3.594,12.580,-35.970)
O4: (-1.122,15.660,-36.643)
O2: (-1.899,11.220,-36.687)
C6: (-4.028,13.845,-35.715)
C5: (-3.262,14.926,-35.925)
O3': (-5.813,10.635,-32.471)
Image (generated by PyMOL):