Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A42:A355
Extra
PDB:
ATOM 1 O3' G A 41 -21.576 46.222 104.791 1.00 18.23 O
ATOM 2 P C A 42 -20.391 45.980 105.843 1.00 28.79 P
ATOM 3 OP1 C A 42 -19.095 45.921 105.095 1.00 0.79 O
ATOM 4 OP2 C A 42 -20.798 44.847 106.739 1.00 0.79 O
ATOM 5 O5' C A 42 -20.358 47.326 106.689 1.00 32.54 O
ATOM 6 C5' C A 42 -21.519 47.788 107.402 1.00 32.50 C
ATOM 7 C4' C A 42 -21.311 49.211 107.873 1.00 33.95 C
ATOM 8 O4' C A 42 -22.480 49.605 108.633 1.00 35.87 O
ATOM 9 C3' C A 42 -20.110 49.406 108.795 1.00 34.21 C
ATOM 10 O3' C A 42 -19.603 50.741 108.635 1.00 34.11 O
ATOM 11 C2' C A 42 -20.746 49.282 110.177 1.00 35.17 C
ATOM 12 O2' C A 42 -20.040 49.926 111.211 1.00 34.90 O
ATOM 13 C1' C A 42 -22.094 49.951 109.941 1.00 35.50 C
ATOM 14 N1 C A 42 -23.167 49.555 110.855 1.00 10.20 N
ATOM 15 C2 C A 42 -23.650 50.486 111.760 1.00 10.20 C
ATOM 16 O2 C A 42 -23.111 51.592 111.821 1.00 10.20 O
ATOM 17 N3 C A 42 -24.687 50.164 112.557 1.00 10.20 N
ATOM 18 C4 C A 42 -25.221 48.952 112.488 1.00 10.20 C
ATOM 19 N4 C A 42 -26.250 48.672 113.291 1.00 10.20 N
ATOM 20 C5 C A 42 -24.728 47.967 111.591 1.00 10.20 C
ATOM 21 C6 C A 42 -23.707 48.309 110.800 1.00 10.20 C
ATOM 22 P C A 43 -18.311 51.038 107.704 1.00 15.01 P
ATOM 23 OP1 C A 43 -17.837 49.786 107.064 1.00 70.32 O
ATOM 24 OP2 C A 43 -17.363 51.847 108.512 1.00 72.05 O
ATOM 25 O5' C A 43 -18.907 51.979 106.575 1.00 58.24 O
TER
ATOM 1 O3' A B 354 -30.877 49.361 109.269 1.00 6.52 O
ATOM 2 P U B 355 -30.011 48.362 110.176 1.00 29.41 P
ATOM 3 OP1 U B 355 -30.930 47.218 110.483 1.00 28.53 O
ATOM 4 OP2 U B 355 -29.389 49.115 111.286 1.00 29.54 O
ATOM 5 O5' U B 355 -28.822 47.889 109.218 1.00 11.82 O
ATOM 6 C5' U B 355 -28.863 46.610 108.531 1.00 11.76 C
ATOM 7 C4' U B 355 -27.498 46.270 107.983 1.00 11.55 C
ATOM 8 O4' U B 355 -27.073 47.300 107.071 1.00 12.66 O
ATOM 9 C3' U B 355 -26.398 46.213 109.030 1.00 12.11 C
ATOM 10 O3' U B 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 11 C2' U B 355 -25.130 46.626 108.278 1.00 12.22 C
ATOM 12 O2' U B 355 -24.190 45.608 108.009 1.00 12.59 O
ATOM 13 C1' U B 355 -25.668 47.284 107.007 1.00 12.15 C
ATOM 14 N1 U B 355 -25.164 48.650 106.860 1.00 16.50 N
ATOM 15 C2 U B 355 -25.653 49.636 107.688 1.00 16.26 C
ATOM 16 O2 U B 355 -26.540 49.438 108.507 1.00 18.53 O
ATOM 17 N3 U B 355 -25.064 50.863 107.518 1.00 17.69 N
ATOM 18 C4 U B 355 -24.063 51.182 106.617 1.00 17.47 C
ATOM 19 O4 U B 355 -23.533 52.290 106.661 1.00 18.02 O
ATOM 20 C5 U B 355 -23.654 50.110 105.784 1.00 17.15 C
ATOM 21 C6 U B 355 -24.205 48.914 105.932 1.00 16.29 C
ATOM 22 P C B 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 23 OP1 C B 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 24 OP2 C B 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 25 O5' C B 356 -26.904 42.893 110.851 1.00 31.81 O
TER
ATOM 2 P C A 42 -20.391 45.980 105.843 1.00 28.79 P
ATOM 3 OP1 C A 42 -19.095 45.921 105.095 1.00 0.79 O
ATOM 4 OP2 C A 42 -20.798 44.847 106.739 1.00 0.79 O
ATOM 5 O5' C A 42 -20.358 47.326 106.689 1.00 32.54 O
ATOM 6 C5' C A 42 -21.519 47.788 107.402 1.00 32.50 C
ATOM 7 C4' C A 42 -21.311 49.211 107.873 1.00 33.95 C
ATOM 8 O4' C A 42 -22.480 49.605 108.633 1.00 35.87 O
ATOM 9 C3' C A 42 -20.110 49.406 108.795 1.00 34.21 C
ATOM 10 O3' C A 42 -19.603 50.741 108.635 1.00 34.11 O
ATOM 11 C2' C A 42 -20.746 49.282 110.177 1.00 35.17 C
ATOM 12 O2' C A 42 -20.040 49.926 111.211 1.00 34.90 O
ATOM 13 C1' C A 42 -22.094 49.951 109.941 1.00 35.50 C
ATOM 14 N1 C A 42 -23.167 49.555 110.855 1.00 10.20 N
ATOM 15 C2 C A 42 -23.650 50.486 111.760 1.00 10.20 C
ATOM 16 O2 C A 42 -23.111 51.592 111.821 1.00 10.20 O
ATOM 17 N3 C A 42 -24.687 50.164 112.557 1.00 10.20 N
ATOM 18 C4 C A 42 -25.221 48.952 112.488 1.00 10.20 C
ATOM 19 N4 C A 42 -26.250 48.672 113.291 1.00 10.20 N
ATOM 20 C5 C A 42 -24.728 47.967 111.591 1.00 10.20 C
ATOM 21 C6 C A 42 -23.707 48.309 110.800 1.00 10.20 C
ATOM 22 P C A 43 -18.311 51.038 107.704 1.00 15.01 P
ATOM 23 OP1 C A 43 -17.837 49.786 107.064 1.00 70.32 O
ATOM 24 OP2 C A 43 -17.363 51.847 108.512 1.00 72.05 O
ATOM 25 O5' C A 43 -18.907 51.979 106.575 1.00 58.24 O
TER
ATOM 1 O3' A B 354 -30.877 49.361 109.269 1.00 6.52 O
ATOM 2 P U B 355 -30.011 48.362 110.176 1.00 29.41 P
ATOM 3 OP1 U B 355 -30.930 47.218 110.483 1.00 28.53 O
ATOM 4 OP2 U B 355 -29.389 49.115 111.286 1.00 29.54 O
ATOM 5 O5' U B 355 -28.822 47.889 109.218 1.00 11.82 O
ATOM 6 C5' U B 355 -28.863 46.610 108.531 1.00 11.76 C
ATOM 7 C4' U B 355 -27.498 46.270 107.983 1.00 11.55 C
ATOM 8 O4' U B 355 -27.073 47.300 107.071 1.00 12.66 O
ATOM 9 C3' U B 355 -26.398 46.213 109.030 1.00 12.11 C
ATOM 10 O3' U B 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 11 C2' U B 355 -25.130 46.626 108.278 1.00 12.22 C
ATOM 12 O2' U B 355 -24.190 45.608 108.009 1.00 12.59 O
ATOM 13 C1' U B 355 -25.668 47.284 107.007 1.00 12.15 C
ATOM 14 N1 U B 355 -25.164 48.650 106.860 1.00 16.50 N
ATOM 15 C2 U B 355 -25.653 49.636 107.688 1.00 16.26 C
ATOM 16 O2 U B 355 -26.540 49.438 108.507 1.00 18.53 O
ATOM 17 N3 U B 355 -25.064 50.863 107.518 1.00 17.69 N
ATOM 18 C4 U B 355 -24.063 51.182 106.617 1.00 17.47 C
ATOM 19 O4 U B 355 -23.533 52.290 106.661 1.00 18.02 O
ATOM 20 C5 U B 355 -23.654 50.110 105.784 1.00 17.15 C
ATOM 21 C6 U B 355 -24.205 48.914 105.932 1.00 16.29 C
ATOM 22 P C B 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 23 OP1 C B 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 24 OP2 C B 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 25 O5' C B 356 -26.904 42.893 110.851 1.00 31.81 O
TER
Atoms:
C2: (-23.650,50.486,111.760)
OP1: (-19.095,45.921,105.095)
OP2: (-20.798,44.847,106.739)
C4: (-25.221,48.952,112.488)
O5': (-20.358,47.326,106.689)
C3': (-20.110,49.406,108.795)
C1': (-22.094,49.951,109.941)
O4': (-22.480,49.605,108.633)
C5': (-21.519,47.788,107.402)
P: (-20.391,45.980,105.843)
O2: (-23.111,51.592,111.821)
C4': (-21.311,49.211,107.873)
C2': (-20.746,49.282,110.177)
O2': (-20.040,49.926,111.211)
N1: (-23.167,49.555,110.855)
N3: (-24.687,50.164,112.557)
N4: (-26.250,48.672,113.291)
C6: (-23.707,48.309,110.800)
C5: (-24.728,47.967,111.591)
O3': (-19.603,50.741,108.635)
OP1: (-19.095,45.921,105.095)
OP2: (-20.798,44.847,106.739)
C4: (-25.221,48.952,112.488)
O5': (-20.358,47.326,106.689)
C3': (-20.110,49.406,108.795)
C1': (-22.094,49.951,109.941)
O4': (-22.480,49.605,108.633)
C5': (-21.519,47.788,107.402)
P: (-20.391,45.980,105.843)
O2: (-23.111,51.592,111.821)
C4': (-21.311,49.211,107.873)
C2': (-20.746,49.282,110.177)
O2': (-20.040,49.926,111.211)
N1: (-23.167,49.555,110.855)
N3: (-24.687,50.164,112.557)
N4: (-26.250,48.672,113.291)
C6: (-23.707,48.309,110.800)
C5: (-24.728,47.967,111.591)
O3': (-19.603,50.741,108.635)
C4: (-24.063,51.182,106.617)
N3: (-25.064,50.863,107.518)
OP1: (-30.930,47.218,110.483)
OP2: (-29.389,49.115,111.286)
C2: (-25.653,49.636,107.688)
C1': (-25.668,47.284,107.007)
C3': (-26.398,46.213,109.030)
O5': (-28.822,47.889,109.218)
O4': (-27.073,47.300,107.071)
C5': (-28.863,46.610,108.531)
P: (-30.011,48.362,110.176)
C4': (-27.498,46.270,107.983)
C2': (-25.130,46.626,108.278)
O2': (-24.190,45.608,108.009)
N1: (-25.164,48.650,106.860)
O4: (-23.533,52.290,106.661)
O2: (-26.540,49.438,108.507)
C6: (-24.205,48.914,105.932)
C5: (-23.654,50.110,105.784)
O3': (-26.279,44.873,109.465)
N3: (-25.064,50.863,107.518)
OP1: (-30.930,47.218,110.483)
OP2: (-29.389,49.115,111.286)
C2: (-25.653,49.636,107.688)
C1': (-25.668,47.284,107.007)
C3': (-26.398,46.213,109.030)
O5': (-28.822,47.889,109.218)
O4': (-27.073,47.300,107.071)
C5': (-28.863,46.610,108.531)
P: (-30.011,48.362,110.176)
C4': (-27.498,46.270,107.983)
C2': (-25.130,46.626,108.278)
O2': (-24.190,45.608,108.009)
N1: (-25.164,48.650,106.860)
O4: (-23.533,52.290,106.661)
O2: (-26.540,49.438,108.507)
C6: (-24.205,48.914,105.932)
C5: (-23.654,50.110,105.784)
O3': (-26.279,44.873,109.465)
Image (generated by PyMOL):