Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01197:01196
Extra
PDB:
ATOM 1 O3' U A1196 39.469 110.346 126.092 1.00 53.14 O
ATOM 2 P C A1197 40.031 108.900 125.664 1.00 55.68 P
ATOM 3 OP1 C A1197 40.651 108.333 126.892 1.00 55.22 O
ATOM 4 OP2 C A1197 40.819 108.963 124.401 1.00 54.14 O
ATOM 5 O5' C A1197 38.724 108.045 125.367 1.00 55.42 O
ATOM 6 C5' C A1197 37.994 108.176 124.136 1.00 50.04 C
ATOM 7 C4' C A1197 36.826 107.230 124.157 1.00 48.66 C
ATOM 8 O4' C A1197 36.075 107.456 125.376 1.00 47.25 O
ATOM 9 C3' C A1197 35.802 107.364 123.047 1.00 48.27 C
ATOM 10 O3' C A1197 36.196 106.589 121.919 1.00 53.87 O
ATOM 11 C2' C A1197 34.570 106.734 123.689 1.00 46.67 C
ATOM 12 O2' C A1197 34.621 105.320 123.667 1.00 45.01 O
ATOM 13 C1' C A1197 34.705 107.200 125.144 1.00 44.12 C
ATOM 14 N1 C A1197 33.930 108.417 125.459 1.00 40.26 N
ATOM 15 C2 C A1197 32.546 108.310 125.561 1.00 38.58 C
ATOM 16 O2 C A1197 32.024 107.200 125.425 1.00 40.88 O
ATOM 17 N3 C A1197 31.812 109.413 125.809 1.00 36.15 N
ATOM 18 C4 C A1197 32.414 110.590 125.964 1.00 36.37 C
ATOM 19 N4 C A1197 31.644 111.654 126.193 1.00 36.68 N
ATOM 20 C5 C A1197 33.828 110.727 125.890 1.00 33.59 C
ATOM 21 C6 C A1197 34.542 109.627 125.639 1.00 34.74 C
ATOM 22 P G A1198 36.765 107.307 120.597 1.00 55.44 P
ATOM 23 OP1 G A1198 36.550 106.357 119.467 1.00 53.60 O
ATOM 24 OP2 G A1198 38.139 107.813 120.895 1.00 53.33 O
ATOM 25 O5' G A1198 35.830 108.576 120.395 1.00 50.70 O
TER
ATOM 1 O3' A B1195 43.939 114.855 126.020 1.00 46.82 O
ATOM 2 P U B1196 43.721 114.107 124.623 1.00 48.28 P
ATOM 3 OP1 U B1196 44.871 113.196 124.427 1.00 47.88 O
ATOM 4 OP2 U B1196 43.408 115.140 123.596 1.00 50.08 O
ATOM 5 O5' U B1196 42.407 113.231 124.820 1.00 49.38 O
ATOM 6 C5' U B1196 42.163 112.563 126.052 1.00 51.97 C
ATOM 7 C4' U B1196 40.678 112.415 126.293 1.00 51.89 C
ATOM 8 O4' U B1196 39.992 113.689 126.295 1.00 50.12 O
ATOM 9 C3' U B1196 39.866 111.506 125.369 1.00 50.50 C
ATOM 10 O3' U B1196 39.469 110.346 126.092 1.00 53.14 O
ATOM 11 C2' U B1196 38.645 112.362 125.003 1.00 50.41 C
ATOM 12 O2' U B1196 37.428 111.644 125.008 1.00 49.09 O
ATOM 13 C1' U B1196 38.631 113.416 126.106 1.00 49.36 C
ATOM 14 N1 U B1196 37.931 114.645 125.705 1.00 47.60 N
ATOM 15 C2 U B1196 36.866 115.063 126.489 1.00 46.09 C
ATOM 16 O2 U B1196 36.556 114.524 127.537 1.00 46.21 O
ATOM 17 N3 U B1196 36.177 116.141 125.998 1.00 45.21 N
ATOM 18 C4 U B1196 36.441 116.835 124.839 1.00 45.66 C
ATOM 19 O4 U B1196 35.698 117.753 124.509 1.00 47.29 O
ATOM 20 C5 U B1196 37.593 116.386 124.118 1.00 46.71 C
ATOM 21 C6 U B1196 38.285 115.336 124.566 1.00 46.62 C
ATOM 22 P C B1197 40.031 108.900 125.664 1.00 55.68 P
ATOM 23 OP1 C B1197 40.651 108.333 126.892 1.00 55.22 O
ATOM 24 OP2 C B1197 40.819 108.963 124.401 1.00 54.14 O
ATOM 25 O5' C B1197 38.724 108.045 125.367 1.00 55.42 O
TER
ATOM 2 P C A1197 40.031 108.900 125.664 1.00 55.68 P
ATOM 3 OP1 C A1197 40.651 108.333 126.892 1.00 55.22 O
ATOM 4 OP2 C A1197 40.819 108.963 124.401 1.00 54.14 O
ATOM 5 O5' C A1197 38.724 108.045 125.367 1.00 55.42 O
ATOM 6 C5' C A1197 37.994 108.176 124.136 1.00 50.04 C
ATOM 7 C4' C A1197 36.826 107.230 124.157 1.00 48.66 C
ATOM 8 O4' C A1197 36.075 107.456 125.376 1.00 47.25 O
ATOM 9 C3' C A1197 35.802 107.364 123.047 1.00 48.27 C
ATOM 10 O3' C A1197 36.196 106.589 121.919 1.00 53.87 O
ATOM 11 C2' C A1197 34.570 106.734 123.689 1.00 46.67 C
ATOM 12 O2' C A1197 34.621 105.320 123.667 1.00 45.01 O
ATOM 13 C1' C A1197 34.705 107.200 125.144 1.00 44.12 C
ATOM 14 N1 C A1197 33.930 108.417 125.459 1.00 40.26 N
ATOM 15 C2 C A1197 32.546 108.310 125.561 1.00 38.58 C
ATOM 16 O2 C A1197 32.024 107.200 125.425 1.00 40.88 O
ATOM 17 N3 C A1197 31.812 109.413 125.809 1.00 36.15 N
ATOM 18 C4 C A1197 32.414 110.590 125.964 1.00 36.37 C
ATOM 19 N4 C A1197 31.644 111.654 126.193 1.00 36.68 N
ATOM 20 C5 C A1197 33.828 110.727 125.890 1.00 33.59 C
ATOM 21 C6 C A1197 34.542 109.627 125.639 1.00 34.74 C
ATOM 22 P G A1198 36.765 107.307 120.597 1.00 55.44 P
ATOM 23 OP1 G A1198 36.550 106.357 119.467 1.00 53.60 O
ATOM 24 OP2 G A1198 38.139 107.813 120.895 1.00 53.33 O
ATOM 25 O5' G A1198 35.830 108.576 120.395 1.00 50.70 O
TER
ATOM 1 O3' A B1195 43.939 114.855 126.020 1.00 46.82 O
ATOM 2 P U B1196 43.721 114.107 124.623 1.00 48.28 P
ATOM 3 OP1 U B1196 44.871 113.196 124.427 1.00 47.88 O
ATOM 4 OP2 U B1196 43.408 115.140 123.596 1.00 50.08 O
ATOM 5 O5' U B1196 42.407 113.231 124.820 1.00 49.38 O
ATOM 6 C5' U B1196 42.163 112.563 126.052 1.00 51.97 C
ATOM 7 C4' U B1196 40.678 112.415 126.293 1.00 51.89 C
ATOM 8 O4' U B1196 39.992 113.689 126.295 1.00 50.12 O
ATOM 9 C3' U B1196 39.866 111.506 125.369 1.00 50.50 C
ATOM 10 O3' U B1196 39.469 110.346 126.092 1.00 53.14 O
ATOM 11 C2' U B1196 38.645 112.362 125.003 1.00 50.41 C
ATOM 12 O2' U B1196 37.428 111.644 125.008 1.00 49.09 O
ATOM 13 C1' U B1196 38.631 113.416 126.106 1.00 49.36 C
ATOM 14 N1 U B1196 37.931 114.645 125.705 1.00 47.60 N
ATOM 15 C2 U B1196 36.866 115.063 126.489 1.00 46.09 C
ATOM 16 O2 U B1196 36.556 114.524 127.537 1.00 46.21 O
ATOM 17 N3 U B1196 36.177 116.141 125.998 1.00 45.21 N
ATOM 18 C4 U B1196 36.441 116.835 124.839 1.00 45.66 C
ATOM 19 O4 U B1196 35.698 117.753 124.509 1.00 47.29 O
ATOM 20 C5 U B1196 37.593 116.386 124.118 1.00 46.71 C
ATOM 21 C6 U B1196 38.285 115.336 124.566 1.00 46.62 C
ATOM 22 P C B1197 40.031 108.900 125.664 1.00 55.68 P
ATOM 23 OP1 C B1197 40.651 108.333 126.892 1.00 55.22 O
ATOM 24 OP2 C B1197 40.819 108.963 124.401 1.00 54.14 O
ATOM 25 O5' C B1197 38.724 108.045 125.367 1.00 55.42 O
TER
Atoms:
C2: (32.546,108.310,125.561)
OP1: (40.651,108.333,126.892)
OP2: (40.819,108.963,124.401)
C4: (32.414,110.590,125.964)
O5': (38.724,108.045,125.367)
C3': (35.802,107.364,123.047)
C1': (34.705,107.200,125.144)
O4': (36.075,107.456,125.376)
C5': (37.994,108.176,124.136)
P: (40.031,108.900,125.664)
O2: (32.024,107.200,125.425)
C4': (36.826,107.230,124.157)
C2': (34.570,106.734,123.689)
O2': (34.621,105.320,123.667)
N1: (33.930,108.417,125.459)
N3: (31.812,109.413,125.809)
N4: (31.644,111.654,126.193)
C6: (34.542,109.627,125.639)
C5: (33.828,110.727,125.890)
O3': (36.196,106.589,121.919)
OP1: (40.651,108.333,126.892)
OP2: (40.819,108.963,124.401)
C4: (32.414,110.590,125.964)
O5': (38.724,108.045,125.367)
C3': (35.802,107.364,123.047)
C1': (34.705,107.200,125.144)
O4': (36.075,107.456,125.376)
C5': (37.994,108.176,124.136)
P: (40.031,108.900,125.664)
O2: (32.024,107.200,125.425)
C4': (36.826,107.230,124.157)
C2': (34.570,106.734,123.689)
O2': (34.621,105.320,123.667)
N1: (33.930,108.417,125.459)
N3: (31.812,109.413,125.809)
N4: (31.644,111.654,126.193)
C6: (34.542,109.627,125.639)
C5: (33.828,110.727,125.890)
O3': (36.196,106.589,121.919)
C4: (36.441,116.835,124.839)
N3: (36.177,116.141,125.998)
OP1: (44.871,113.196,124.427)
OP2: (43.408,115.140,123.596)
C2: (36.866,115.063,126.489)
C1': (38.631,113.416,126.106)
C3': (39.866,111.506,125.369)
O5': (42.407,113.231,124.820)
O4': (39.992,113.689,126.295)
C5': (42.163,112.563,126.052)
P: (43.721,114.107,124.623)
C4': (40.678,112.415,126.293)
C2': (38.645,112.362,125.003)
O2': (37.428,111.644,125.008)
N1: (37.931,114.645,125.705)
O4: (35.698,117.753,124.509)
O2: (36.556,114.524,127.537)
C6: (38.285,115.336,124.566)
C5: (37.593,116.386,124.118)
O3': (39.469,110.346,126.092)
N3: (36.177,116.141,125.998)
OP1: (44.871,113.196,124.427)
OP2: (43.408,115.140,123.596)
C2: (36.866,115.063,126.489)
C1': (38.631,113.416,126.106)
C3': (39.866,111.506,125.369)
O5': (42.407,113.231,124.820)
O4': (39.992,113.689,126.295)
C5': (42.163,112.563,126.052)
P: (43.721,114.107,124.623)
C4': (40.678,112.415,126.293)
C2': (38.645,112.362,125.003)
O2': (37.428,111.644,125.008)
N1: (37.931,114.645,125.705)
O4: (35.698,117.753,124.509)
O2: (36.556,114.524,127.537)
C6: (38.285,115.336,124.566)
C5: (37.593,116.386,124.118)
O3': (39.469,110.346,126.092)
Image (generated by PyMOL):