Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1248:A1247
Extra
PDB:
ATOM 1 O3' U A1247 13.303 -69.374 6.940 1.00 52.25 O
ATOM 2 P C A1248 13.832 -67.871 7.260 1.00 59.99 P
ATOM 3 OP1 C A1248 12.635 -67.006 7.385 1.00 58.10 O
ATOM 4 OP2 C A1248 14.896 -67.499 6.288 1.00 47.80 O
ATOM 5 O5' C A1248 14.418 -67.998 8.732 1.00 48.94 O
ATOM 6 C5' C A1248 13.726 -68.786 9.704 1.00 51.88 C
ATOM 7 C4' C A1248 14.679 -69.358 10.724 1.00 50.07 C
ATOM 8 O4' C A1248 15.362 -70.552 10.245 1.00 45.67 O
ATOM 9 C3' C A1248 15.795 -68.430 11.157 1.00 48.82 C
ATOM 10 O3' C A1248 15.321 -67.456 12.065 1.00 50.02 O
ATOM 11 C2' C A1248 16.815 -69.407 11.739 1.00 45.13 C
ATOM 12 O2' C A1248 16.503 -69.850 13.037 1.00 54.70 O
ATOM 13 C1' C A1248 16.669 -70.596 10.794 1.00 43.25 C
ATOM 14 N1 C A1248 17.678 -70.551 9.705 1.00 44.16 N
ATOM 15 C2 C A1248 19.001 -70.835 10.027 1.00 43.55 C
ATOM 16 O2 C A1248 19.293 -71.041 11.205 1.00 44.80 O
ATOM 17 N3 C A1248 19.937 -70.853 9.058 1.00 48.09 N
ATOM 18 C4 C A1248 19.600 -70.572 7.805 1.00 53.69 C
ATOM 19 N4 C A1248 20.565 -70.616 6.880 1.00 49.48 N
ATOM 20 C5 C A1248 18.264 -70.240 7.441 1.00 52.58 C
ATOM 21 C6 C A1248 17.342 -70.245 8.414 1.00 47.77 C
ATOM 22 P U A1249 16.265 -66.234 12.463 1.00 52.20 P
ATOM 23 OP1 U A1249 15.458 -65.328 13.314 1.00 49.98 O
ATOM 24 OP2 U A1249 16.897 -65.731 11.225 1.00 39.83 O
ATOM 25 O5' U A1249 17.398 -66.916 13.343 1.00 47.86 O
TER
ATOM 1 O3' C B1246 14.285 -70.885 1.134 1.00 47.46 O
ATOM 2 P U B1247 14.757 -69.735 2.157 1.00 54.29 P
ATOM 3 OP1 U B1247 13.791 -68.610 2.130 1.00 61.21 O
ATOM 4 OP2 U B1247 16.200 -69.448 1.964 1.00 54.10 O
ATOM 5 O5' U B1247 14.573 -70.457 3.554 1.00 43.76 O
ATOM 6 C5' U B1247 13.281 -70.833 4.001 1.00 43.24 C
ATOM 7 C4' U B1247 13.352 -71.281 5.431 1.00 47.14 C
ATOM 8 O4' U B1247 14.002 -72.577 5.483 1.00 47.37 O
ATOM 9 C3' U B1247 14.158 -70.347 6.332 1.00 46.87 C
ATOM 10 O3' U B1247 13.303 -69.374 6.940 1.00 52.25 O
ATOM 11 C2' U B1247 14.741 -71.308 7.358 1.00 45.94 C
ATOM 12 O2' U B1247 13.831 -71.541 8.407 1.00 40.25 O
ATOM 13 C1' U B1247 14.946 -72.593 6.531 1.00 53.51 C
ATOM 14 N1 U B1247 16.285 -72.743 5.921 1.00 55.39 N
ATOM 15 C2 U B1247 17.384 -72.995 6.734 1.00 54.74 C
ATOM 16 O2 U B1247 17.305 -73.146 7.942 1.00 54.03 O
ATOM 17 N3 U B1247 18.582 -73.080 6.079 1.00 59.60 N
ATOM 18 C4 U B1247 18.808 -72.957 4.731 1.00 58.20 C
ATOM 19 O4 U B1247 19.955 -73.055 4.301 1.00 59.25 O
ATOM 20 C5 U B1247 17.645 -72.718 3.953 1.00 54.68 C
ATOM 21 C6 U B1247 16.454 -72.622 4.554 1.00 54.47 C
ATOM 22 P C B1248 13.832 -67.871 7.260 1.00 59.99 P
ATOM 23 OP1 C B1248 12.635 -67.006 7.385 1.00 58.10 O
ATOM 24 OP2 C B1248 14.896 -67.499 6.288 1.00 47.80 O
ATOM 25 O5' C B1248 14.418 -67.998 8.732 1.00 48.94 O
TER
ATOM 2 P C A1248 13.832 -67.871 7.260 1.00 59.99 P
ATOM 3 OP1 C A1248 12.635 -67.006 7.385 1.00 58.10 O
ATOM 4 OP2 C A1248 14.896 -67.499 6.288 1.00 47.80 O
ATOM 5 O5' C A1248 14.418 -67.998 8.732 1.00 48.94 O
ATOM 6 C5' C A1248 13.726 -68.786 9.704 1.00 51.88 C
ATOM 7 C4' C A1248 14.679 -69.358 10.724 1.00 50.07 C
ATOM 8 O4' C A1248 15.362 -70.552 10.245 1.00 45.67 O
ATOM 9 C3' C A1248 15.795 -68.430 11.157 1.00 48.82 C
ATOM 10 O3' C A1248 15.321 -67.456 12.065 1.00 50.02 O
ATOM 11 C2' C A1248 16.815 -69.407 11.739 1.00 45.13 C
ATOM 12 O2' C A1248 16.503 -69.850 13.037 1.00 54.70 O
ATOM 13 C1' C A1248 16.669 -70.596 10.794 1.00 43.25 C
ATOM 14 N1 C A1248 17.678 -70.551 9.705 1.00 44.16 N
ATOM 15 C2 C A1248 19.001 -70.835 10.027 1.00 43.55 C
ATOM 16 O2 C A1248 19.293 -71.041 11.205 1.00 44.80 O
ATOM 17 N3 C A1248 19.937 -70.853 9.058 1.00 48.09 N
ATOM 18 C4 C A1248 19.600 -70.572 7.805 1.00 53.69 C
ATOM 19 N4 C A1248 20.565 -70.616 6.880 1.00 49.48 N
ATOM 20 C5 C A1248 18.264 -70.240 7.441 1.00 52.58 C
ATOM 21 C6 C A1248 17.342 -70.245 8.414 1.00 47.77 C
ATOM 22 P U A1249 16.265 -66.234 12.463 1.00 52.20 P
ATOM 23 OP1 U A1249 15.458 -65.328 13.314 1.00 49.98 O
ATOM 24 OP2 U A1249 16.897 -65.731 11.225 1.00 39.83 O
ATOM 25 O5' U A1249 17.398 -66.916 13.343 1.00 47.86 O
TER
ATOM 1 O3' C B1246 14.285 -70.885 1.134 1.00 47.46 O
ATOM 2 P U B1247 14.757 -69.735 2.157 1.00 54.29 P
ATOM 3 OP1 U B1247 13.791 -68.610 2.130 1.00 61.21 O
ATOM 4 OP2 U B1247 16.200 -69.448 1.964 1.00 54.10 O
ATOM 5 O5' U B1247 14.573 -70.457 3.554 1.00 43.76 O
ATOM 6 C5' U B1247 13.281 -70.833 4.001 1.00 43.24 C
ATOM 7 C4' U B1247 13.352 -71.281 5.431 1.00 47.14 C
ATOM 8 O4' U B1247 14.002 -72.577 5.483 1.00 47.37 O
ATOM 9 C3' U B1247 14.158 -70.347 6.332 1.00 46.87 C
ATOM 10 O3' U B1247 13.303 -69.374 6.940 1.00 52.25 O
ATOM 11 C2' U B1247 14.741 -71.308 7.358 1.00 45.94 C
ATOM 12 O2' U B1247 13.831 -71.541 8.407 1.00 40.25 O
ATOM 13 C1' U B1247 14.946 -72.593 6.531 1.00 53.51 C
ATOM 14 N1 U B1247 16.285 -72.743 5.921 1.00 55.39 N
ATOM 15 C2 U B1247 17.384 -72.995 6.734 1.00 54.74 C
ATOM 16 O2 U B1247 17.305 -73.146 7.942 1.00 54.03 O
ATOM 17 N3 U B1247 18.582 -73.080 6.079 1.00 59.60 N
ATOM 18 C4 U B1247 18.808 -72.957 4.731 1.00 58.20 C
ATOM 19 O4 U B1247 19.955 -73.055 4.301 1.00 59.25 O
ATOM 20 C5 U B1247 17.645 -72.718 3.953 1.00 54.68 C
ATOM 21 C6 U B1247 16.454 -72.622 4.554 1.00 54.47 C
ATOM 22 P C B1248 13.832 -67.871 7.260 1.00 59.99 P
ATOM 23 OP1 C B1248 12.635 -67.006 7.385 1.00 58.10 O
ATOM 24 OP2 C B1248 14.896 -67.499 6.288 1.00 47.80 O
ATOM 25 O5' C B1248 14.418 -67.998 8.732 1.00 48.94 O
TER
Atoms:
C2: (19.001,-70.835,10.027)
OP1: (12.635,-67.006,7.385)
OP2: (14.896,-67.499,6.288)
C4: (19.600,-70.572,7.805)
O5': (14.418,-67.998,8.732)
C3': (15.795,-68.430,11.157)
C1': (16.669,-70.596,10.794)
O4': (15.362,-70.552,10.245)
C5': (13.726,-68.786,9.704)
P: (13.832,-67.871,7.260)
O2: (19.293,-71.041,11.205)
C4': (14.679,-69.358,10.724)
C2': (16.815,-69.407,11.739)
O2': (16.503,-69.850,13.037)
N1: (17.678,-70.551,9.705)
N3: (19.937,-70.853,9.058)
N4: (20.565,-70.616,6.880)
C6: (17.342,-70.245,8.414)
C5: (18.264,-70.240,7.441)
O3': (15.321,-67.456,12.065)
OP1: (12.635,-67.006,7.385)
OP2: (14.896,-67.499,6.288)
C4: (19.600,-70.572,7.805)
O5': (14.418,-67.998,8.732)
C3': (15.795,-68.430,11.157)
C1': (16.669,-70.596,10.794)
O4': (15.362,-70.552,10.245)
C5': (13.726,-68.786,9.704)
P: (13.832,-67.871,7.260)
O2: (19.293,-71.041,11.205)
C4': (14.679,-69.358,10.724)
C2': (16.815,-69.407,11.739)
O2': (16.503,-69.850,13.037)
N1: (17.678,-70.551,9.705)
N3: (19.937,-70.853,9.058)
N4: (20.565,-70.616,6.880)
C6: (17.342,-70.245,8.414)
C5: (18.264,-70.240,7.441)
O3': (15.321,-67.456,12.065)
C4: (18.808,-72.957,4.731)
N3: (18.582,-73.080,6.079)
OP1: (13.791,-68.610,2.130)
OP2: (16.200,-69.448,1.964)
C2: (17.384,-72.995,6.734)
C1': (14.946,-72.593,6.531)
C3': (14.158,-70.347,6.332)
O5': (14.573,-70.457,3.554)
O4': (14.002,-72.577,5.483)
C5': (13.281,-70.833,4.001)
P: (14.757,-69.735,2.157)
C4': (13.352,-71.281,5.431)
C2': (14.741,-71.308,7.358)
O2': (13.831,-71.541,8.407)
N1: (16.285,-72.743,5.921)
O4: (19.955,-73.055,4.301)
O2: (17.305,-73.146,7.942)
C6: (16.454,-72.622,4.554)
C5: (17.645,-72.718,3.953)
O3': (13.303,-69.374,6.940)
N3: (18.582,-73.080,6.079)
OP1: (13.791,-68.610,2.130)
OP2: (16.200,-69.448,1.964)
C2: (17.384,-72.995,6.734)
C1': (14.946,-72.593,6.531)
C3': (14.158,-70.347,6.332)
O5': (14.573,-70.457,3.554)
O4': (14.002,-72.577,5.483)
C5': (13.281,-70.833,4.001)
P: (14.757,-69.735,2.157)
C4': (13.352,-71.281,5.431)
C2': (14.741,-71.308,7.358)
O2': (13.831,-71.541,8.407)
N1: (16.285,-72.743,5.921)
O4: (19.955,-73.055,4.301)
O2: (17.305,-73.146,7.942)
C6: (16.454,-72.622,4.554)
C5: (17.645,-72.718,3.953)
O3': (13.303,-69.374,6.940)
Image (generated by PyMOL):