Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01293:01292
Extra
PDB:
ATOM 1 O3' U A1292 9.768 122.733 65.166 1.00 39.10 O
ATOM 2 P C A1293 9.723 124.311 64.867 1.00 42.36 P
ATOM 3 OP1 C A1293 9.165 124.471 63.500 1.00 40.99 O
ATOM 4 OP2 C A1293 11.051 124.882 65.180 1.00 43.35 O
ATOM 5 O5' C A1293 8.719 124.918 65.951 1.00 39.91 O
ATOM 6 C5' C A1293 7.333 124.525 66.009 1.00 40.17 C
ATOM 7 C4' C A1293 6.680 125.071 67.263 1.00 41.32 C
ATOM 8 O4' C A1293 7.352 124.533 68.434 1.00 40.46 O
ATOM 9 C3' C A1293 6.748 126.581 67.455 1.00 41.95 C
ATOM 10 O3' C A1293 5.719 127.263 66.745 1.00 43.09 O
ATOM 11 C2' C A1293 6.599 126.729 68.964 1.00 42.13 C
ATOM 12 O2' C A1293 5.270 126.625 69.427 1.00 43.59 O
ATOM 13 C1' C A1293 7.387 125.517 69.460 1.00 42.08 C
ATOM 14 N1 C A1293 8.795 125.837 69.774 1.00 41.89 N
ATOM 15 C2 C A1293 9.090 126.517 70.977 1.00 42.82 C
ATOM 16 O2 C A1293 8.162 126.843 71.739 1.00 39.40 O
ATOM 17 N3 C A1293 10.379 126.799 71.272 1.00 43.63 N
ATOM 18 C4 C A1293 11.354 126.431 70.435 1.00 42.85 C
ATOM 19 N4 C A1293 12.609 126.717 70.779 1.00 42.53 N
ATOM 20 C5 C A1293 11.084 125.752 69.210 1.00 41.35 C
ATOM 21 C6 C A1293 9.806 125.479 68.922 1.00 41.42 C
ATOM 22 P C A1294 5.842 128.845 66.483 1.00 45.03 P
ATOM 23 OP1 C A1294 4.681 129.269 65.653 1.00 47.98 O
ATOM 24 OP2 C A1294 7.216 129.113 65.992 1.00 47.03 O
ATOM 25 O5' C A1294 5.711 129.498 67.930 1.00 42.34 O
TER
ATOM 1 O3' C B1291 14.816 119.214 65.089 1.00 42.07 O
ATOM 2 P U B1292 14.528 120.754 64.721 1.00 44.49 P
ATOM 3 OP1 U B1292 14.319 120.763 63.252 1.00 44.29 O
ATOM 4 OP2 U B1292 15.563 121.639 65.322 1.00 44.84 O
ATOM 5 O5' U B1292 13.157 121.090 65.463 1.00 44.01 O
ATOM 6 C5' U B1292 11.955 120.351 65.178 1.00 41.08 C
ATOM 7 C4' U B1292 10.857 120.756 66.128 1.00 40.92 C
ATOM 8 O4' U B1292 11.226 120.389 67.484 1.00 41.30 O
ATOM 9 C3' U B1292 10.571 122.246 66.230 1.00 41.23 C
ATOM 10 O3' U B1292 9.768 122.733 65.166 1.00 39.10 O
ATOM 11 C2' U B1292 9.869 122.349 67.578 1.00 41.96 C
ATOM 12 O2' U B1292 8.495 122.019 67.545 1.00 41.33 O
ATOM 13 C1' U B1292 10.638 121.307 68.397 1.00 42.91 C
ATOM 14 N1 U B1292 11.692 121.935 69.207 1.00 44.77 N
ATOM 15 C2 U B1292 11.308 122.500 70.414 1.00 46.05 C
ATOM 16 O2 U B1292 10.169 122.458 70.835 1.00 47.69 O
ATOM 17 N3 U B1292 12.309 123.119 71.108 1.00 47.35 N
ATOM 18 C4 U B1292 13.629 123.230 70.740 1.00 47.14 C
ATOM 19 O4 U B1292 14.399 123.870 71.459 1.00 47.66 O
ATOM 20 C5 U B1292 13.960 122.601 69.495 1.00 44.67 C
ATOM 21 C6 U B1292 13.004 121.988 68.789 1.00 44.20 C
ATOM 22 P C B1293 9.723 124.311 64.867 1.00 42.36 P
ATOM 23 OP1 C B1293 9.165 124.471 63.500 1.00 40.99 O
ATOM 24 OP2 C B1293 11.051 124.882 65.180 1.00 43.35 O
ATOM 25 O5' C B1293 8.719 124.918 65.951 1.00 39.91 O
TER
ATOM 2 P C A1293 9.723 124.311 64.867 1.00 42.36 P
ATOM 3 OP1 C A1293 9.165 124.471 63.500 1.00 40.99 O
ATOM 4 OP2 C A1293 11.051 124.882 65.180 1.00 43.35 O
ATOM 5 O5' C A1293 8.719 124.918 65.951 1.00 39.91 O
ATOM 6 C5' C A1293 7.333 124.525 66.009 1.00 40.17 C
ATOM 7 C4' C A1293 6.680 125.071 67.263 1.00 41.32 C
ATOM 8 O4' C A1293 7.352 124.533 68.434 1.00 40.46 O
ATOM 9 C3' C A1293 6.748 126.581 67.455 1.00 41.95 C
ATOM 10 O3' C A1293 5.719 127.263 66.745 1.00 43.09 O
ATOM 11 C2' C A1293 6.599 126.729 68.964 1.00 42.13 C
ATOM 12 O2' C A1293 5.270 126.625 69.427 1.00 43.59 O
ATOM 13 C1' C A1293 7.387 125.517 69.460 1.00 42.08 C
ATOM 14 N1 C A1293 8.795 125.837 69.774 1.00 41.89 N
ATOM 15 C2 C A1293 9.090 126.517 70.977 1.00 42.82 C
ATOM 16 O2 C A1293 8.162 126.843 71.739 1.00 39.40 O
ATOM 17 N3 C A1293 10.379 126.799 71.272 1.00 43.63 N
ATOM 18 C4 C A1293 11.354 126.431 70.435 1.00 42.85 C
ATOM 19 N4 C A1293 12.609 126.717 70.779 1.00 42.53 N
ATOM 20 C5 C A1293 11.084 125.752 69.210 1.00 41.35 C
ATOM 21 C6 C A1293 9.806 125.479 68.922 1.00 41.42 C
ATOM 22 P C A1294 5.842 128.845 66.483 1.00 45.03 P
ATOM 23 OP1 C A1294 4.681 129.269 65.653 1.00 47.98 O
ATOM 24 OP2 C A1294 7.216 129.113 65.992 1.00 47.03 O
ATOM 25 O5' C A1294 5.711 129.498 67.930 1.00 42.34 O
TER
ATOM 1 O3' C B1291 14.816 119.214 65.089 1.00 42.07 O
ATOM 2 P U B1292 14.528 120.754 64.721 1.00 44.49 P
ATOM 3 OP1 U B1292 14.319 120.763 63.252 1.00 44.29 O
ATOM 4 OP2 U B1292 15.563 121.639 65.322 1.00 44.84 O
ATOM 5 O5' U B1292 13.157 121.090 65.463 1.00 44.01 O
ATOM 6 C5' U B1292 11.955 120.351 65.178 1.00 41.08 C
ATOM 7 C4' U B1292 10.857 120.756 66.128 1.00 40.92 C
ATOM 8 O4' U B1292 11.226 120.389 67.484 1.00 41.30 O
ATOM 9 C3' U B1292 10.571 122.246 66.230 1.00 41.23 C
ATOM 10 O3' U B1292 9.768 122.733 65.166 1.00 39.10 O
ATOM 11 C2' U B1292 9.869 122.349 67.578 1.00 41.96 C
ATOM 12 O2' U B1292 8.495 122.019 67.545 1.00 41.33 O
ATOM 13 C1' U B1292 10.638 121.307 68.397 1.00 42.91 C
ATOM 14 N1 U B1292 11.692 121.935 69.207 1.00 44.77 N
ATOM 15 C2 U B1292 11.308 122.500 70.414 1.00 46.05 C
ATOM 16 O2 U B1292 10.169 122.458 70.835 1.00 47.69 O
ATOM 17 N3 U B1292 12.309 123.119 71.108 1.00 47.35 N
ATOM 18 C4 U B1292 13.629 123.230 70.740 1.00 47.14 C
ATOM 19 O4 U B1292 14.399 123.870 71.459 1.00 47.66 O
ATOM 20 C5 U B1292 13.960 122.601 69.495 1.00 44.67 C
ATOM 21 C6 U B1292 13.004 121.988 68.789 1.00 44.20 C
ATOM 22 P C B1293 9.723 124.311 64.867 1.00 42.36 P
ATOM 23 OP1 C B1293 9.165 124.471 63.500 1.00 40.99 O
ATOM 24 OP2 C B1293 11.051 124.882 65.180 1.00 43.35 O
ATOM 25 O5' C B1293 8.719 124.918 65.951 1.00 39.91 O
TER
Atoms:
C2: (9.090,126.517,70.977)
OP1: (9.165,124.471,63.500)
OP2: (11.051,124.882,65.180)
C4: (11.354,126.431,70.435)
O5': (8.719,124.918,65.951)
C3': (6.748,126.581,67.455)
C1': (7.387,125.517,69.460)
O4': (7.352,124.533,68.434)
C5': (7.333,124.525,66.009)
P: (9.723,124.311,64.867)
O2: (8.162,126.843,71.739)
C4': (6.680,125.071,67.263)
C2': (6.599,126.729,68.964)
O2': (5.270,126.625,69.427)
N1: (8.795,125.837,69.774)
N3: (10.379,126.799,71.272)
N4: (12.609,126.717,70.779)
C6: (9.806,125.479,68.922)
C5: (11.084,125.752,69.210)
O3': (5.719,127.263,66.745)
OP1: (9.165,124.471,63.500)
OP2: (11.051,124.882,65.180)
C4: (11.354,126.431,70.435)
O5': (8.719,124.918,65.951)
C3': (6.748,126.581,67.455)
C1': (7.387,125.517,69.460)
O4': (7.352,124.533,68.434)
C5': (7.333,124.525,66.009)
P: (9.723,124.311,64.867)
O2: (8.162,126.843,71.739)
C4': (6.680,125.071,67.263)
C2': (6.599,126.729,68.964)
O2': (5.270,126.625,69.427)
N1: (8.795,125.837,69.774)
N3: (10.379,126.799,71.272)
N4: (12.609,126.717,70.779)
C6: (9.806,125.479,68.922)
C5: (11.084,125.752,69.210)
O3': (5.719,127.263,66.745)
C4: (13.629,123.230,70.740)
N3: (12.309,123.119,71.108)
OP1: (14.319,120.763,63.252)
OP2: (15.563,121.639,65.322)
C2: (11.308,122.500,70.414)
C1': (10.638,121.307,68.397)
C3': (10.571,122.246,66.230)
O5': (13.157,121.090,65.463)
O4': (11.226,120.389,67.484)
C5': (11.955,120.351,65.178)
P: (14.528,120.754,64.721)
C4': (10.857,120.756,66.128)
C2': (9.869,122.349,67.578)
O2': (8.495,122.019,67.545)
N1: (11.692,121.935,69.207)
O4: (14.399,123.870,71.459)
O2: (10.169,122.458,70.835)
C6: (13.004,121.988,68.789)
C5: (13.960,122.601,69.495)
O3': (9.768,122.733,65.166)
N3: (12.309,123.119,71.108)
OP1: (14.319,120.763,63.252)
OP2: (15.563,121.639,65.322)
C2: (11.308,122.500,70.414)
C1': (10.638,121.307,68.397)
C3': (10.571,122.246,66.230)
O5': (13.157,121.090,65.463)
O4': (11.226,120.389,67.484)
C5': (11.955,120.351,65.178)
P: (14.528,120.754,64.721)
C4': (10.857,120.756,66.128)
C2': (9.869,122.349,67.578)
O2': (8.495,122.019,67.545)
N1: (11.692,121.935,69.207)
O4: (14.399,123.870,71.459)
O2: (10.169,122.458,70.835)
C6: (13.004,121.988,68.789)
C5: (13.960,122.601,69.495)
O3': (9.768,122.733,65.166)
Image (generated by PyMOL):