Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:W60:W59
Extra
PDB:
ATOM 1 O3' U A 59 -62.993 176.381 106.526 1.00138.73 O
ATOM 2 P C A 60 -62.047 177.408 107.325 1.00125.22 P
ATOM 3 OP1 C A 60 -60.782 177.517 106.548 1.00128.17 O
ATOM 4 OP2 C A 60 -61.995 176.969 108.742 1.00127.18 O
ATOM 5 O5' C A 60 -62.831 178.801 107.260 1.00 80.45 O
ATOM 6 C5' C A 60 -62.130 180.038 106.989 1.00 84.73 C
ATOM 7 C4' C A 60 -62.772 181.209 107.717 1.00 83.10 C
ATOM 8 O4' C A 60 -64.054 181.545 107.127 1.00 84.99 O
ATOM 9 C3' C A 60 -63.057 181.050 109.204 1.00 82.61 C
ATOM 10 O3' C A 60 -61.887 181.294 109.988 1.00 81.82 O
ATOM 11 C2' C A 60 -64.142 182.097 109.447 1.00 84.42 C
ATOM 12 O2' C A 60 -63.624 183.395 109.657 1.00 89.64 O
ATOM 13 C1' C A 60 -64.907 182.082 108.122 1.00 80.90 C
ATOM 14 N1 C A 60 -66.152 181.293 108.163 1.00108.20 N
ATOM 15 C2 C A 60 -67.320 181.892 108.670 1.00108.30 C
ATOM 16 O2 C A 60 -67.273 183.064 109.074 1.00111.21 O
ATOM 17 N3 C A 60 -68.466 181.177 108.707 1.00114.05 N
ATOM 18 C4 C A 60 -68.480 179.917 108.267 1.00113.08 C
ATOM 19 N4 C A 60 -69.635 179.248 108.325 1.00110.92 N
ATOM 20 C5 C A 60 -67.311 179.285 107.749 1.00114.79 C
ATOM 21 C6 C A 60 -66.182 180.002 107.716 1.00102.80 C
ATOM 22 P C A 61 -61.568 180.367 111.269 1.00 83.75 P
ATOM 23 OP1 C A 61 -60.089 180.364 111.427 1.00 82.04 O
ATOM 24 OP2 C A 61 -62.298 179.072 111.153 1.00 87.25 O
ATOM 25 O5' C A 61 -62.210 181.156 112.497 1.00 39.44 O
TER
ATOM 1 O3' U B 58 -68.915 173.583 106.864 1.00 86.04 O
ATOM 2 P U B 59 -68.772 175.064 107.503 1.00139.85 P
ATOM 3 OP1 U B 59 -68.884 174.924 108.980 1.00135.87 O
ATOM 4 OP2 U B 59 -69.702 175.965 106.790 1.00138.14 O
ATOM 5 O5' U B 59 -67.281 175.518 107.153 1.00137.08 O
ATOM 6 C5' U B 59 -66.147 174.691 107.499 1.00140.09 C
ATOM 7 C4' U B 59 -64.970 175.008 106.602 1.00131.71 C
ATOM 8 O4' U B 59 -65.381 174.830 105.221 1.00136.62 O
ATOM 9 C3' U B 59 -64.409 176.423 106.709 1.00132.20 C
ATOM 10 O3' U B 59 -62.993 176.381 106.526 1.00138.73 O
ATOM 11 C2' U B 59 -65.059 177.149 105.534 1.00135.98 C
ATOM 12 O2' U B 59 -64.263 178.204 105.031 1.00135.84 O
ATOM 13 C1' U B 59 -65.189 176.030 104.500 1.00137.32 C
ATOM 14 N1 U B 59 -66.328 176.196 103.580 1.00128.22 N
ATOM 15 C2 U B 59 -66.061 176.349 102.226 1.00128.22 C
ATOM 16 O2 U B 59 -64.932 176.380 101.764 1.00128.22 O
ATOM 17 N3 U B 59 -67.171 176.466 101.428 1.00128.22 N
ATOM 18 C4 U B 59 -68.491 176.449 101.830 1.00128.22 C
ATOM 19 O4 U B 59 -69.384 176.497 100.981 1.00128.22 O
ATOM 20 C5 U B 59 -68.683 176.308 103.239 1.00128.22 C
ATOM 21 C6 U B 59 -67.625 176.190 104.045 1.00128.22 C
ATOM 22 P C B 60 -62.047 177.408 107.325 1.00125.22 P
ATOM 23 OP1 C B 60 -60.782 177.517 106.548 1.00128.17 O
ATOM 24 OP2 C B 60 -61.995 176.969 108.742 1.00127.18 O
ATOM 25 O5' C B 60 -62.831 178.801 107.260 1.00 80.45 O
TER
ATOM 2 P C A 60 -62.047 177.408 107.325 1.00125.22 P
ATOM 3 OP1 C A 60 -60.782 177.517 106.548 1.00128.17 O
ATOM 4 OP2 C A 60 -61.995 176.969 108.742 1.00127.18 O
ATOM 5 O5' C A 60 -62.831 178.801 107.260 1.00 80.45 O
ATOM 6 C5' C A 60 -62.130 180.038 106.989 1.00 84.73 C
ATOM 7 C4' C A 60 -62.772 181.209 107.717 1.00 83.10 C
ATOM 8 O4' C A 60 -64.054 181.545 107.127 1.00 84.99 O
ATOM 9 C3' C A 60 -63.057 181.050 109.204 1.00 82.61 C
ATOM 10 O3' C A 60 -61.887 181.294 109.988 1.00 81.82 O
ATOM 11 C2' C A 60 -64.142 182.097 109.447 1.00 84.42 C
ATOM 12 O2' C A 60 -63.624 183.395 109.657 1.00 89.64 O
ATOM 13 C1' C A 60 -64.907 182.082 108.122 1.00 80.90 C
ATOM 14 N1 C A 60 -66.152 181.293 108.163 1.00108.20 N
ATOM 15 C2 C A 60 -67.320 181.892 108.670 1.00108.30 C
ATOM 16 O2 C A 60 -67.273 183.064 109.074 1.00111.21 O
ATOM 17 N3 C A 60 -68.466 181.177 108.707 1.00114.05 N
ATOM 18 C4 C A 60 -68.480 179.917 108.267 1.00113.08 C
ATOM 19 N4 C A 60 -69.635 179.248 108.325 1.00110.92 N
ATOM 20 C5 C A 60 -67.311 179.285 107.749 1.00114.79 C
ATOM 21 C6 C A 60 -66.182 180.002 107.716 1.00102.80 C
ATOM 22 P C A 61 -61.568 180.367 111.269 1.00 83.75 P
ATOM 23 OP1 C A 61 -60.089 180.364 111.427 1.00 82.04 O
ATOM 24 OP2 C A 61 -62.298 179.072 111.153 1.00 87.25 O
ATOM 25 O5' C A 61 -62.210 181.156 112.497 1.00 39.44 O
TER
ATOM 1 O3' U B 58 -68.915 173.583 106.864 1.00 86.04 O
ATOM 2 P U B 59 -68.772 175.064 107.503 1.00139.85 P
ATOM 3 OP1 U B 59 -68.884 174.924 108.980 1.00135.87 O
ATOM 4 OP2 U B 59 -69.702 175.965 106.790 1.00138.14 O
ATOM 5 O5' U B 59 -67.281 175.518 107.153 1.00137.08 O
ATOM 6 C5' U B 59 -66.147 174.691 107.499 1.00140.09 C
ATOM 7 C4' U B 59 -64.970 175.008 106.602 1.00131.71 C
ATOM 8 O4' U B 59 -65.381 174.830 105.221 1.00136.62 O
ATOM 9 C3' U B 59 -64.409 176.423 106.709 1.00132.20 C
ATOM 10 O3' U B 59 -62.993 176.381 106.526 1.00138.73 O
ATOM 11 C2' U B 59 -65.059 177.149 105.534 1.00135.98 C
ATOM 12 O2' U B 59 -64.263 178.204 105.031 1.00135.84 O
ATOM 13 C1' U B 59 -65.189 176.030 104.500 1.00137.32 C
ATOM 14 N1 U B 59 -66.328 176.196 103.580 1.00128.22 N
ATOM 15 C2 U B 59 -66.061 176.349 102.226 1.00128.22 C
ATOM 16 O2 U B 59 -64.932 176.380 101.764 1.00128.22 O
ATOM 17 N3 U B 59 -67.171 176.466 101.428 1.00128.22 N
ATOM 18 C4 U B 59 -68.491 176.449 101.830 1.00128.22 C
ATOM 19 O4 U B 59 -69.384 176.497 100.981 1.00128.22 O
ATOM 20 C5 U B 59 -68.683 176.308 103.239 1.00128.22 C
ATOM 21 C6 U B 59 -67.625 176.190 104.045 1.00128.22 C
ATOM 22 P C B 60 -62.047 177.408 107.325 1.00125.22 P
ATOM 23 OP1 C B 60 -60.782 177.517 106.548 1.00128.17 O
ATOM 24 OP2 C B 60 -61.995 176.969 108.742 1.00127.18 O
ATOM 25 O5' C B 60 -62.831 178.801 107.260 1.00 80.45 O
TER
Atoms:
C2: (-67.320,181.892,108.670)
OP1: (-60.782,177.517,106.548)
OP2: (-61.995,176.969,108.742)
C4: (-68.480,179.917,108.267)
O5': (-62.831,178.801,107.260)
C3': (-63.057,181.050,109.204)
C1': (-64.907,182.082,108.122)
O4': (-64.054,181.545,107.127)
C5': (-62.130,180.038,106.989)
P: (-62.047,177.408,107.325)
O2: (-67.273,183.064,109.074)
C4': (-62.772,181.209,107.717)
C2': (-64.142,182.097,109.447)
O2': (-63.624,183.395,109.657)
N1: (-66.152,181.293,108.163)
N3: (-68.466,181.177,108.707)
N4: (-69.635,179.248,108.325)
C6: (-66.182,180.002,107.716)
C5: (-67.311,179.285,107.749)
O3': (-61.887,181.294,109.988)
OP1: (-60.782,177.517,106.548)
OP2: (-61.995,176.969,108.742)
C4: (-68.480,179.917,108.267)
O5': (-62.831,178.801,107.260)
C3': (-63.057,181.050,109.204)
C1': (-64.907,182.082,108.122)
O4': (-64.054,181.545,107.127)
C5': (-62.130,180.038,106.989)
P: (-62.047,177.408,107.325)
O2: (-67.273,183.064,109.074)
C4': (-62.772,181.209,107.717)
C2': (-64.142,182.097,109.447)
O2': (-63.624,183.395,109.657)
N1: (-66.152,181.293,108.163)
N3: (-68.466,181.177,108.707)
N4: (-69.635,179.248,108.325)
C6: (-66.182,180.002,107.716)
C5: (-67.311,179.285,107.749)
O3': (-61.887,181.294,109.988)
C4: (-68.491,176.449,101.830)
N3: (-67.171,176.466,101.428)
OP1: (-68.884,174.924,108.980)
OP2: (-69.702,175.965,106.790)
C2: (-66.061,176.349,102.226)
C1': (-65.189,176.030,104.500)
C3': (-64.409,176.423,106.709)
O5': (-67.281,175.518,107.153)
O4': (-65.381,174.830,105.221)
C5': (-66.147,174.691,107.499)
P: (-68.772,175.064,107.503)
C4': (-64.970,175.008,106.602)
C2': (-65.059,177.149,105.534)
O2': (-64.263,178.204,105.031)
N1: (-66.328,176.196,103.580)
O4: (-69.384,176.497,100.981)
O2: (-64.932,176.380,101.764)
C6: (-67.625,176.190,104.045)
C5: (-68.683,176.308,103.239)
O3': (-62.993,176.381,106.526)
N3: (-67.171,176.466,101.428)
OP1: (-68.884,174.924,108.980)
OP2: (-69.702,175.965,106.790)
C2: (-66.061,176.349,102.226)
C1': (-65.189,176.030,104.500)
C3': (-64.409,176.423,106.709)
O5': (-67.281,175.518,107.153)
O4': (-65.381,174.830,105.221)
C5': (-66.147,174.691,107.499)
P: (-68.772,175.064,107.503)
C4': (-64.970,175.008,106.602)
C2': (-65.059,177.149,105.534)
O2': (-64.263,178.204,105.031)
N1: (-66.328,176.196,103.580)
O4: (-69.384,176.497,100.981)
O2: (-64.932,176.380,101.764)
C6: (-67.625,176.190,104.045)
C5: (-68.683,176.308,103.239)
O3': (-62.993,176.381,106.526)
Image (generated by PyMOL):