Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12906:12905
Extra
PDB:
ATOM 1 O3' U A2905 77.084 66.455 51.013 1.00143.95 O
ATOM 2 P C A2906 76.292 67.749 51.571 1.00228.04 P
ATOM 3 OP1 C A2906 74.846 67.412 51.595 1.00227.72 O
ATOM 4 OP2 C A2906 76.735 68.915 50.765 1.00228.67 O
ATOM 5 O5' C A2906 76.838 67.872 53.062 1.00228.12 O
ATOM 6 C5' C A2906 76.882 66.733 53.918 1.00227.58 C
ATOM 7 C4' C A2906 78.288 66.194 54.071 1.00227.50 C
ATOM 8 O4' C A2906 79.158 66.851 53.110 1.00227.94 O
ATOM 9 C3' C A2906 78.914 66.406 55.445 1.00227.66 C
ATOM 10 O3' C A2906 79.711 65.275 55.801 1.00227.25 O
ATOM 11 C2' C A2906 79.802 67.639 55.253 1.00228.35 C
ATOM 12 O2' C A2906 80.944 67.671 56.086 1.00228.51 O
ATOM 13 C1' C A2906 80.188 67.564 53.772 1.00228.39 C
ATOM 14 N1 C A2906 80.301 68.899 53.115 1.00229.04 N
ATOM 15 C2 C A2906 81.378 69.780 53.309 1.00229.60 C
ATOM 16 O2 C A2906 82.304 69.443 54.061 1.00229.55 O
ATOM 17 N3 C A2906 81.381 70.978 52.662 1.00230.18 N
ATOM 18 C4 C A2906 80.369 71.311 51.854 1.00230.23 C
ATOM 19 N4 C A2906 80.378 72.483 51.229 1.00230.82 N
ATOM 20 C5 C A2906 79.270 70.447 51.638 1.00229.68 C
ATOM 21 C6 C A2906 79.292 69.278 52.279 1.00229.10 C
ATOM 22 P U A2907 79.674 64.717 57.312 1.00263.48 P
ATOM 23 OP1 U A2907 78.355 65.090 57.881 1.00263.48 O
ATOM 24 OP2 U A2907 80.903 65.202 57.986 1.00263.88 O
ATOM 25 O5' U A2907 79.749 63.139 57.116 1.00262.80 O
TER
ATOM 1 O3' U B2904 72.285 65.841 47.887 1.00 78.86 O
ATOM 2 P U B2905 73.068 67.239 47.800 1.00144.04 P
ATOM 3 OP1 U B2905 72.350 68.199 48.666 1.00144.36 O
ATOM 4 OP2 U B2905 73.241 67.561 46.361 1.00144.30 O
ATOM 5 O5' U B2905 74.459 66.863 48.448 1.00143.97 O
ATOM 6 C5' U B2905 74.585 65.662 49.194 1.00143.40 C
ATOM 7 C4' U B2905 76.006 65.156 49.234 1.00143.32 C
ATOM 8 O4' U B2905 76.436 64.723 47.908 1.00143.26 O
ATOM 9 C3' U B2905 77.067 66.161 49.627 1.00143.88 C
ATOM 10 O3' U B2905 77.084 66.455 51.013 1.00143.95 O
ATOM 11 C2' U B2905 78.316 65.476 49.096 1.00143.75 C
ATOM 12 O2' U B2905 78.581 64.281 49.828 1.00143.22 O
ATOM 13 C1' U B2905 77.798 65.072 47.720 1.00143.58 C
ATOM 14 N1 U B2905 77.864 66.220 46.756 1.00144.17 N
ATOM 15 C2 U B2905 76.849 66.443 45.824 1.00144.21 C
ATOM 16 O2 U B2905 75.841 65.760 45.698 1.00143.80 O
ATOM 17 N3 U B2905 77.029 67.542 45.004 1.00144.80 N
ATOM 18 C4 U B2905 78.073 68.446 44.974 1.00145.34 C
ATOM 19 O4 U B2905 78.045 69.372 44.148 1.00145.83 O
ATOM 20 C5 U B2905 79.084 68.160 45.955 1.00145.26 C
ATOM 21 C6 U B2905 78.942 67.095 46.777 1.00144.69 C
ATOM 22 P C B2906 76.292 67.749 51.571 1.00228.04 P
ATOM 23 OP1 C B2906 74.846 67.412 51.595 1.00227.72 O
ATOM 24 OP2 C B2906 76.735 68.915 50.765 1.00228.67 O
ATOM 25 O5' C B2906 76.838 67.872 53.062 1.00228.12 O
TER
ATOM 2 P C A2906 76.292 67.749 51.571 1.00228.04 P
ATOM 3 OP1 C A2906 74.846 67.412 51.595 1.00227.72 O
ATOM 4 OP2 C A2906 76.735 68.915 50.765 1.00228.67 O
ATOM 5 O5' C A2906 76.838 67.872 53.062 1.00228.12 O
ATOM 6 C5' C A2906 76.882 66.733 53.918 1.00227.58 C
ATOM 7 C4' C A2906 78.288 66.194 54.071 1.00227.50 C
ATOM 8 O4' C A2906 79.158 66.851 53.110 1.00227.94 O
ATOM 9 C3' C A2906 78.914 66.406 55.445 1.00227.66 C
ATOM 10 O3' C A2906 79.711 65.275 55.801 1.00227.25 O
ATOM 11 C2' C A2906 79.802 67.639 55.253 1.00228.35 C
ATOM 12 O2' C A2906 80.944 67.671 56.086 1.00228.51 O
ATOM 13 C1' C A2906 80.188 67.564 53.772 1.00228.39 C
ATOM 14 N1 C A2906 80.301 68.899 53.115 1.00229.04 N
ATOM 15 C2 C A2906 81.378 69.780 53.309 1.00229.60 C
ATOM 16 O2 C A2906 82.304 69.443 54.061 1.00229.55 O
ATOM 17 N3 C A2906 81.381 70.978 52.662 1.00230.18 N
ATOM 18 C4 C A2906 80.369 71.311 51.854 1.00230.23 C
ATOM 19 N4 C A2906 80.378 72.483 51.229 1.00230.82 N
ATOM 20 C5 C A2906 79.270 70.447 51.638 1.00229.68 C
ATOM 21 C6 C A2906 79.292 69.278 52.279 1.00229.10 C
ATOM 22 P U A2907 79.674 64.717 57.312 1.00263.48 P
ATOM 23 OP1 U A2907 78.355 65.090 57.881 1.00263.48 O
ATOM 24 OP2 U A2907 80.903 65.202 57.986 1.00263.88 O
ATOM 25 O5' U A2907 79.749 63.139 57.116 1.00262.80 O
TER
ATOM 1 O3' U B2904 72.285 65.841 47.887 1.00 78.86 O
ATOM 2 P U B2905 73.068 67.239 47.800 1.00144.04 P
ATOM 3 OP1 U B2905 72.350 68.199 48.666 1.00144.36 O
ATOM 4 OP2 U B2905 73.241 67.561 46.361 1.00144.30 O
ATOM 5 O5' U B2905 74.459 66.863 48.448 1.00143.97 O
ATOM 6 C5' U B2905 74.585 65.662 49.194 1.00143.40 C
ATOM 7 C4' U B2905 76.006 65.156 49.234 1.00143.32 C
ATOM 8 O4' U B2905 76.436 64.723 47.908 1.00143.26 O
ATOM 9 C3' U B2905 77.067 66.161 49.627 1.00143.88 C
ATOM 10 O3' U B2905 77.084 66.455 51.013 1.00143.95 O
ATOM 11 C2' U B2905 78.316 65.476 49.096 1.00143.75 C
ATOM 12 O2' U B2905 78.581 64.281 49.828 1.00143.22 O
ATOM 13 C1' U B2905 77.798 65.072 47.720 1.00143.58 C
ATOM 14 N1 U B2905 77.864 66.220 46.756 1.00144.17 N
ATOM 15 C2 U B2905 76.849 66.443 45.824 1.00144.21 C
ATOM 16 O2 U B2905 75.841 65.760 45.698 1.00143.80 O
ATOM 17 N3 U B2905 77.029 67.542 45.004 1.00144.80 N
ATOM 18 C4 U B2905 78.073 68.446 44.974 1.00145.34 C
ATOM 19 O4 U B2905 78.045 69.372 44.148 1.00145.83 O
ATOM 20 C5 U B2905 79.084 68.160 45.955 1.00145.26 C
ATOM 21 C6 U B2905 78.942 67.095 46.777 1.00144.69 C
ATOM 22 P C B2906 76.292 67.749 51.571 1.00228.04 P
ATOM 23 OP1 C B2906 74.846 67.412 51.595 1.00227.72 O
ATOM 24 OP2 C B2906 76.735 68.915 50.765 1.00228.67 O
ATOM 25 O5' C B2906 76.838 67.872 53.062 1.00228.12 O
TER
Atoms:
C2: (81.378,69.780,53.309)
OP1: (74.846,67.412,51.595)
OP2: (76.735,68.915,50.765)
C4: (80.369,71.311,51.854)
O5': (76.838,67.872,53.062)
C3': (78.914,66.406,55.445)
C1': (80.188,67.564,53.772)
O4': (79.158,66.851,53.110)
C5': (76.882,66.733,53.918)
P: (76.292,67.749,51.571)
O2: (82.304,69.443,54.061)
C4': (78.288,66.194,54.071)
C2': (79.802,67.639,55.253)
O2': (80.944,67.671,56.086)
N1: (80.301,68.899,53.115)
N3: (81.381,70.978,52.662)
N4: (80.378,72.483,51.229)
C6: (79.292,69.278,52.279)
C5: (79.270,70.447,51.638)
O3': (79.711,65.275,55.801)
OP1: (74.846,67.412,51.595)
OP2: (76.735,68.915,50.765)
C4: (80.369,71.311,51.854)
O5': (76.838,67.872,53.062)
C3': (78.914,66.406,55.445)
C1': (80.188,67.564,53.772)
O4': (79.158,66.851,53.110)
C5': (76.882,66.733,53.918)
P: (76.292,67.749,51.571)
O2: (82.304,69.443,54.061)
C4': (78.288,66.194,54.071)
C2': (79.802,67.639,55.253)
O2': (80.944,67.671,56.086)
N1: (80.301,68.899,53.115)
N3: (81.381,70.978,52.662)
N4: (80.378,72.483,51.229)
C6: (79.292,69.278,52.279)
C5: (79.270,70.447,51.638)
O3': (79.711,65.275,55.801)
C4: (78.073,68.446,44.974)
N3: (77.029,67.542,45.004)
OP1: (72.350,68.199,48.666)
OP2: (73.241,67.561,46.361)
C2: (76.849,66.443,45.824)
C1': (77.798,65.072,47.720)
C3': (77.067,66.161,49.627)
O5': (74.459,66.863,48.448)
O4': (76.436,64.723,47.908)
C5': (74.585,65.662,49.194)
P: (73.068,67.239,47.800)
C4': (76.006,65.156,49.234)
C2': (78.316,65.476,49.096)
O2': (78.581,64.281,49.828)
N1: (77.864,66.220,46.756)
O4: (78.045,69.372,44.148)
O2: (75.841,65.760,45.698)
C6: (78.942,67.095,46.777)
C5: (79.084,68.160,45.955)
O3': (77.084,66.455,51.013)
N3: (77.029,67.542,45.004)
OP1: (72.350,68.199,48.666)
OP2: (73.241,67.561,46.361)
C2: (76.849,66.443,45.824)
C1': (77.798,65.072,47.720)
C3': (77.067,66.161,49.627)
O5': (74.459,66.863,48.448)
O4': (76.436,64.723,47.908)
C5': (74.585,65.662,49.194)
P: (73.068,67.239,47.800)
C4': (76.006,65.156,49.234)
C2': (78.316,65.476,49.096)
O2': (78.581,64.281,49.828)
N1: (77.864,66.220,46.756)
O4: (78.045,69.372,44.148)
O2: (75.841,65.760,45.698)
C6: (78.942,67.095,46.777)
C5: (79.084,68.160,45.955)
O3': (77.084,66.455,51.013)
Image (generated by PyMOL):