Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1867:1866
Extra
PDB:
ATOM 1 O3' U A 866 30.434 4.873 92.041 1.00 36.01 O
ATOM 2 P C A 867 29.050 5.505 91.523 1.00 36.00 P
ATOM 3 OP1 C A 867 29.278 5.986 90.113 1.00 35.82 O
ATOM 4 OP2 C A 867 28.635 6.477 92.551 1.00 36.29 O
ATOM 5 O5' C A 867 28.055 4.275 91.536 1.00 35.93 O
ATOM 6 C5' C A 867 28.388 3.059 90.912 1.00 35.71 C
ATOM 7 C4' C A 867 27.633 1.923 91.518 1.00 35.74 C
ATOM 8 O4' C A 867 28.214 1.613 92.790 1.00 35.90 O
ATOM 9 C3' C A 867 26.175 2.196 91.801 1.00 35.89 C
ATOM 10 O3' C A 867 25.441 0.979 91.675 1.00 35.82 O
ATOM 11 C2' C A 867 26.228 2.622 93.247 1.00 36.16 C
ATOM 12 O2' C A 867 25.020 2.544 93.952 1.00 36.35 O
ATOM 13 C1' C A 867 27.240 1.668 93.777 1.00 36.12 C
ATOM 14 N1 C A 867 27.857 2.134 94.996 1.00 36.34 N
ATOM 15 C2 C A 867 27.797 1.269 96.026 1.00 36.46 C
ATOM 16 O2 C A 867 27.278 0.172 95.768 1.00 36.35 O
ATOM 17 N3 C A 867 28.310 1.655 97.211 1.00 36.69 N
ATOM 18 C4 C A 867 28.842 2.858 97.369 1.00 36.80 C
ATOM 19 N4 C A 867 29.327 3.185 98.570 1.00 37.05 N
ATOM 20 C5 C A 867 28.897 3.775 96.281 1.00 36.67 C
ATOM 21 C6 C A 867 28.392 3.373 95.124 1.00 36.44 C
ATOM 22 P G A 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 23 OP1 G A 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 24 OP2 G A 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 25 O5' G A 868 23.777 -0.623 90.696 1.00 38.53 O
TER
ATOM 1 O3' A B 865 31.805 10.776 92.761 1.00 36.47 O
ATOM 2 P U B 866 30.509 9.927 92.988 1.00 36.75 P
ATOM 3 OP1 U B 866 29.701 9.952 91.718 1.00 36.57 O
ATOM 4 OP2 U B 866 29.960 10.428 94.140 1.00 37.04 O
ATOM 5 O5' U B 866 31.081 8.465 93.224 1.00 36.58 O
ATOM 6 C5' U B 866 31.720 7.788 92.153 1.00 36.29 C
ATOM 7 C4' U B 866 32.197 6.434 92.540 1.00 36.19 C
ATOM 8 O4' U B 866 33.180 6.522 93.581 1.00 36.35 O
ATOM 9 C3' U B 866 31.165 5.495 93.079 1.00 36.22 C
ATOM 10 O3' U B 866 30.434 4.873 92.041 1.00 36.01 O
ATOM 11 C2' U B 866 31.998 4.503 93.868 1.00 36.23 C
ATOM 12 O2' U B 866 32.375 3.428 93.032 1.00 35.97 O
ATOM 13 C1' U B 866 33.253 5.307 94.235 1.00 36.34 C
ATOM 14 N1 U B 866 33.384 5.572 95.669 1.00 36.62 N
ATOM 15 C2 U B 866 32.315 5.851 96.527 1.00 36.85 C
ATOM 16 O2 U B 866 31.151 5.930 96.242 1.00 36.84 O
ATOM 17 N3 U B 866 32.640 6.109 97.847 1.00 37.13 N
ATOM 18 C4 U B 866 33.893 6.130 98.401 1.00 37.21 C
ATOM 19 O4 U B 866 33.952 6.366 99.579 1.00 37.49 O
ATOM 20 C5 U B 866 34.941 5.841 97.484 1.00 36.97 C
ATOM 21 C6 U B 866 34.638 5.585 96.207 1.00 36.70 C
ATOM 22 P C B 867 29.050 5.505 91.523 1.00 36.00 P
ATOM 23 OP1 C B 867 29.278 5.986 90.113 1.00 35.82 O
ATOM 24 OP2 C B 867 28.635 6.477 92.551 1.00 36.29 O
ATOM 25 O5' C B 867 28.055 4.275 91.536 1.00 35.93 O
TER
ATOM 2 P C A 867 29.050 5.505 91.523 1.00 36.00 P
ATOM 3 OP1 C A 867 29.278 5.986 90.113 1.00 35.82 O
ATOM 4 OP2 C A 867 28.635 6.477 92.551 1.00 36.29 O
ATOM 5 O5' C A 867 28.055 4.275 91.536 1.00 35.93 O
ATOM 6 C5' C A 867 28.388 3.059 90.912 1.00 35.71 C
ATOM 7 C4' C A 867 27.633 1.923 91.518 1.00 35.74 C
ATOM 8 O4' C A 867 28.214 1.613 92.790 1.00 35.90 O
ATOM 9 C3' C A 867 26.175 2.196 91.801 1.00 35.89 C
ATOM 10 O3' C A 867 25.441 0.979 91.675 1.00 35.82 O
ATOM 11 C2' C A 867 26.228 2.622 93.247 1.00 36.16 C
ATOM 12 O2' C A 867 25.020 2.544 93.952 1.00 36.35 O
ATOM 13 C1' C A 867 27.240 1.668 93.777 1.00 36.12 C
ATOM 14 N1 C A 867 27.857 2.134 94.996 1.00 36.34 N
ATOM 15 C2 C A 867 27.797 1.269 96.026 1.00 36.46 C
ATOM 16 O2 C A 867 27.278 0.172 95.768 1.00 36.35 O
ATOM 17 N3 C A 867 28.310 1.655 97.211 1.00 36.69 N
ATOM 18 C4 C A 867 28.842 2.858 97.369 1.00 36.80 C
ATOM 19 N4 C A 867 29.327 3.185 98.570 1.00 37.05 N
ATOM 20 C5 C A 867 28.897 3.775 96.281 1.00 36.67 C
ATOM 21 C6 C A 867 28.392 3.373 95.124 1.00 36.44 C
ATOM 22 P G A 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 23 OP1 G A 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 24 OP2 G A 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 25 O5' G A 868 23.777 -0.623 90.696 1.00 38.53 O
TER
ATOM 1 O3' A B 865 31.805 10.776 92.761 1.00 36.47 O
ATOM 2 P U B 866 30.509 9.927 92.988 1.00 36.75 P
ATOM 3 OP1 U B 866 29.701 9.952 91.718 1.00 36.57 O
ATOM 4 OP2 U B 866 29.960 10.428 94.140 1.00 37.04 O
ATOM 5 O5' U B 866 31.081 8.465 93.224 1.00 36.58 O
ATOM 6 C5' U B 866 31.720 7.788 92.153 1.00 36.29 C
ATOM 7 C4' U B 866 32.197 6.434 92.540 1.00 36.19 C
ATOM 8 O4' U B 866 33.180 6.522 93.581 1.00 36.35 O
ATOM 9 C3' U B 866 31.165 5.495 93.079 1.00 36.22 C
ATOM 10 O3' U B 866 30.434 4.873 92.041 1.00 36.01 O
ATOM 11 C2' U B 866 31.998 4.503 93.868 1.00 36.23 C
ATOM 12 O2' U B 866 32.375 3.428 93.032 1.00 35.97 O
ATOM 13 C1' U B 866 33.253 5.307 94.235 1.00 36.34 C
ATOM 14 N1 U B 866 33.384 5.572 95.669 1.00 36.62 N
ATOM 15 C2 U B 866 32.315 5.851 96.527 1.00 36.85 C
ATOM 16 O2 U B 866 31.151 5.930 96.242 1.00 36.84 O
ATOM 17 N3 U B 866 32.640 6.109 97.847 1.00 37.13 N
ATOM 18 C4 U B 866 33.893 6.130 98.401 1.00 37.21 C
ATOM 19 O4 U B 866 33.952 6.366 99.579 1.00 37.49 O
ATOM 20 C5 U B 866 34.941 5.841 97.484 1.00 36.97 C
ATOM 21 C6 U B 866 34.638 5.585 96.207 1.00 36.70 C
ATOM 22 P C B 867 29.050 5.505 91.523 1.00 36.00 P
ATOM 23 OP1 C B 867 29.278 5.986 90.113 1.00 35.82 O
ATOM 24 OP2 C B 867 28.635 6.477 92.551 1.00 36.29 O
ATOM 25 O5' C B 867 28.055 4.275 91.536 1.00 35.93 O
TER
Atoms:
C2: (27.797,1.269,96.026)
OP1: (29.278,5.986,90.113)
OP2: (28.635,6.477,92.551)
C4: (28.842,2.858,97.369)
O5': (28.055,4.275,91.536)
C3': (26.175,2.196,91.801)
C1': (27.240,1.668,93.777)
O4': (28.214,1.613,92.790)
C5': (28.388,3.059,90.912)
P: (29.050,5.505,91.523)
O2: (27.278,0.172,95.768)
C4': (27.633,1.923,91.518)
C2': (26.228,2.622,93.247)
O2': (25.020,2.544,93.952)
N1: (27.857,2.134,94.996)
N3: (28.310,1.655,97.211)
N4: (29.327,3.185,98.570)
C6: (28.392,3.373,95.124)
C5: (28.897,3.775,96.281)
O3': (25.441,0.979,91.675)
OP1: (29.278,5.986,90.113)
OP2: (28.635,6.477,92.551)
C4: (28.842,2.858,97.369)
O5': (28.055,4.275,91.536)
C3': (26.175,2.196,91.801)
C1': (27.240,1.668,93.777)
O4': (28.214,1.613,92.790)
C5': (28.388,3.059,90.912)
P: (29.050,5.505,91.523)
O2: (27.278,0.172,95.768)
C4': (27.633,1.923,91.518)
C2': (26.228,2.622,93.247)
O2': (25.020,2.544,93.952)
N1: (27.857,2.134,94.996)
N3: (28.310,1.655,97.211)
N4: (29.327,3.185,98.570)
C6: (28.392,3.373,95.124)
C5: (28.897,3.775,96.281)
O3': (25.441,0.979,91.675)
C4: (33.893,6.130,98.401)
N3: (32.640,6.109,97.847)
OP1: (29.701,9.952,91.718)
OP2: (29.960,10.428,94.140)
C2: (32.315,5.851,96.527)
C1': (33.253,5.307,94.235)
C3': (31.165,5.495,93.079)
O5': (31.081,8.465,93.224)
O4': (33.180,6.522,93.581)
C5': (31.720,7.788,92.153)
P: (30.509,9.927,92.988)
C4': (32.197,6.434,92.540)
C2': (31.998,4.503,93.868)
O2': (32.375,3.428,93.032)
N1: (33.384,5.572,95.669)
O4: (33.952,6.366,99.579)
O2: (31.151,5.930,96.242)
C6: (34.638,5.585,96.207)
C5: (34.941,5.841,97.484)
O3': (30.434,4.873,92.041)
N3: (32.640,6.109,97.847)
OP1: (29.701,9.952,91.718)
OP2: (29.960,10.428,94.140)
C2: (32.315,5.851,96.527)
C1': (33.253,5.307,94.235)
C3': (31.165,5.495,93.079)
O5': (31.081,8.465,93.224)
O4': (33.180,6.522,93.581)
C5': (31.720,7.788,92.153)
P: (30.509,9.927,92.988)
C4': (32.197,6.434,92.540)
C2': (31.998,4.503,93.868)
O2': (32.375,3.428,93.032)
N1: (33.384,5.572,95.669)
O4: (33.952,6.366,99.579)
O2: (31.151,5.930,96.242)
C6: (34.638,5.585,96.207)
C5: (34.941,5.841,97.484)
O3': (30.434,4.873,92.041)
Image (generated by PyMOL):