Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1EXD:B37:B36
Extra
PDB:
ATOM 1 O3' U A 36 14.186 3.745 15.868 1.00 94.42 O
ATOM 2 P C A 37 13.718 4.955 16.815 1.00 96.13 P
ATOM 3 OP1 C A 37 13.190 6.054 15.964 1.00 94.61 O
ATOM 4 OP2 C A 37 14.843 5.220 17.745 1.00 96.19 O
ATOM 5 O5' C A 37 12.520 4.344 17.673 1.00 8.00 O
ATOM 6 C5' C A 37 11.306 3.879 17.039 1.00 6.00 C
ATOM 7 C4' C A 37 10.512 3.002 17.989 1.00 6.00 C
ATOM 8 O4' C A 37 11.294 1.827 18.331 1.00 8.00 O
ATOM 9 C3' C A 37 10.176 3.627 19.332 1.00 6.00 C
ATOM 10 O3' C A 37 9.003 4.409 19.246 1.00 8.00 O
ATOM 11 C2' C A 37 9.977 2.408 20.216 1.00 6.00 C
ATOM 12 O2' C A 37 8.724 1.792 20.012 1.00 8.00 O
ATOM 13 C1' C A 37 11.077 1.488 19.691 1.00 6.00 C
ATOM 14 N1 C A 37 12.354 1.621 20.413 1.00 7.00 N
ATOM 15 C2 C A 37 12.358 1.458 21.798 1.00 6.00 C
ATOM 16 O2 C A 37 11.285 1.248 22.384 1.00 8.00 O
ATOM 17 N3 C A 37 13.524 1.536 22.468 1.00 7.00 N
ATOM 18 C4 C A 37 14.656 1.772 21.809 1.00 6.00 C
ATOM 19 N4 C A 37 15.783 1.828 22.519 1.00 7.00 N
ATOM 20 C5 C A 37 14.683 1.960 20.397 1.00 99.70 C
ATOM 21 C6 C A 37 13.519 1.882 19.746 1.00 6.00 C
ATOM 22 P C A 38 9.118 6.005 19.324 1.00 15.00 P
ATOM 23 OP1 C A 38 9.127 6.554 17.941 1.00 8.00 O
ATOM 24 OP2 C A 38 10.240 6.320 20.247 1.00 8.00 O
ATOM 25 O5' C A 38 7.773 6.451 20.036 1.00 8.00 O
TER
ATOM 1 O3' U B 35 20.131 2.079 16.264 1.00 87.27 O
ATOM 2 P U B 36 19.204 3.270 16.819 1.00 88.55 P
ATOM 3 OP1 U B 36 19.374 4.428 15.904 1.00 90.35 O
ATOM 4 OP2 U B 36 19.450 3.435 18.279 1.00 82.43 O
ATOM 5 O5' U B 36 17.720 2.731 16.626 1.00 94.05 O
ATOM 6 C5' U B 36 17.152 2.556 15.309 1.00 95.61 C
ATOM 7 C4' U B 36 15.771 1.952 15.419 1.00 93.54 C
ATOM 8 O4' U B 36 15.883 0.583 15.892 1.00 90.32 O
ATOM 9 C3' U B 36 14.866 2.633 16.435 1.00 93.37 C
ATOM 10 O3' U B 36 14.186 3.745 15.868 1.00 94.42 O
ATOM 11 C2' U B 36 13.896 1.524 16.803 1.00 91.67 C
ATOM 12 O2' U B 36 12.869 1.386 15.844 1.00 98.02 O
ATOM 13 C1' U B 36 14.808 0.296 16.768 1.00 90.62 C
ATOM 14 N1 U B 36 15.354 -0.059 18.085 1.00 89.19 N
ATOM 15 C2 U B 36 14.470 -0.529 19.030 1.00 91.36 C
ATOM 16 O2 U B 36 13.279 -0.645 18.819 1.00 95.02 O
ATOM 17 N3 U B 36 15.029 -0.858 20.237 1.00 88.49 N
ATOM 18 C4 U B 36 16.351 -0.768 20.586 1.00 84.76 C
ATOM 19 O4 U B 36 16.710 -1.177 21.690 1.00 83.46 O
ATOM 20 C5 U B 36 17.203 -0.264 19.558 1.00 86.92 C
ATOM 21 C6 U B 36 16.687 0.064 18.369 1.00 87.72 C
ATOM 22 P C B 37 13.718 4.955 16.815 1.00 96.13 P
ATOM 23 OP1 C B 37 13.190 6.054 15.964 1.00 94.61 O
ATOM 24 OP2 C B 37 14.843 5.220 17.745 1.00 96.19 O
ATOM 25 O5' C B 37 12.520 4.344 17.673 1.00 8.00 O
TER
ATOM 2 P C A 37 13.718 4.955 16.815 1.00 96.13 P
ATOM 3 OP1 C A 37 13.190 6.054 15.964 1.00 94.61 O
ATOM 4 OP2 C A 37 14.843 5.220 17.745 1.00 96.19 O
ATOM 5 O5' C A 37 12.520 4.344 17.673 1.00 8.00 O
ATOM 6 C5' C A 37 11.306 3.879 17.039 1.00 6.00 C
ATOM 7 C4' C A 37 10.512 3.002 17.989 1.00 6.00 C
ATOM 8 O4' C A 37 11.294 1.827 18.331 1.00 8.00 O
ATOM 9 C3' C A 37 10.176 3.627 19.332 1.00 6.00 C
ATOM 10 O3' C A 37 9.003 4.409 19.246 1.00 8.00 O
ATOM 11 C2' C A 37 9.977 2.408 20.216 1.00 6.00 C
ATOM 12 O2' C A 37 8.724 1.792 20.012 1.00 8.00 O
ATOM 13 C1' C A 37 11.077 1.488 19.691 1.00 6.00 C
ATOM 14 N1 C A 37 12.354 1.621 20.413 1.00 7.00 N
ATOM 15 C2 C A 37 12.358 1.458 21.798 1.00 6.00 C
ATOM 16 O2 C A 37 11.285 1.248 22.384 1.00 8.00 O
ATOM 17 N3 C A 37 13.524 1.536 22.468 1.00 7.00 N
ATOM 18 C4 C A 37 14.656 1.772 21.809 1.00 6.00 C
ATOM 19 N4 C A 37 15.783 1.828 22.519 1.00 7.00 N
ATOM 20 C5 C A 37 14.683 1.960 20.397 1.00 99.70 C
ATOM 21 C6 C A 37 13.519 1.882 19.746 1.00 6.00 C
ATOM 22 P C A 38 9.118 6.005 19.324 1.00 15.00 P
ATOM 23 OP1 C A 38 9.127 6.554 17.941 1.00 8.00 O
ATOM 24 OP2 C A 38 10.240 6.320 20.247 1.00 8.00 O
ATOM 25 O5' C A 38 7.773 6.451 20.036 1.00 8.00 O
TER
ATOM 1 O3' U B 35 20.131 2.079 16.264 1.00 87.27 O
ATOM 2 P U B 36 19.204 3.270 16.819 1.00 88.55 P
ATOM 3 OP1 U B 36 19.374 4.428 15.904 1.00 90.35 O
ATOM 4 OP2 U B 36 19.450 3.435 18.279 1.00 82.43 O
ATOM 5 O5' U B 36 17.720 2.731 16.626 1.00 94.05 O
ATOM 6 C5' U B 36 17.152 2.556 15.309 1.00 95.61 C
ATOM 7 C4' U B 36 15.771 1.952 15.419 1.00 93.54 C
ATOM 8 O4' U B 36 15.883 0.583 15.892 1.00 90.32 O
ATOM 9 C3' U B 36 14.866 2.633 16.435 1.00 93.37 C
ATOM 10 O3' U B 36 14.186 3.745 15.868 1.00 94.42 O
ATOM 11 C2' U B 36 13.896 1.524 16.803 1.00 91.67 C
ATOM 12 O2' U B 36 12.869 1.386 15.844 1.00 98.02 O
ATOM 13 C1' U B 36 14.808 0.296 16.768 1.00 90.62 C
ATOM 14 N1 U B 36 15.354 -0.059 18.085 1.00 89.19 N
ATOM 15 C2 U B 36 14.470 -0.529 19.030 1.00 91.36 C
ATOM 16 O2 U B 36 13.279 -0.645 18.819 1.00 95.02 O
ATOM 17 N3 U B 36 15.029 -0.858 20.237 1.00 88.49 N
ATOM 18 C4 U B 36 16.351 -0.768 20.586 1.00 84.76 C
ATOM 19 O4 U B 36 16.710 -1.177 21.690 1.00 83.46 O
ATOM 20 C5 U B 36 17.203 -0.264 19.558 1.00 86.92 C
ATOM 21 C6 U B 36 16.687 0.064 18.369 1.00 87.72 C
ATOM 22 P C B 37 13.718 4.955 16.815 1.00 96.13 P
ATOM 23 OP1 C B 37 13.190 6.054 15.964 1.00 94.61 O
ATOM 24 OP2 C B 37 14.843 5.220 17.745 1.00 96.19 O
ATOM 25 O5' C B 37 12.520 4.344 17.673 1.00 8.00 O
TER
Atoms:
C2: (12.358,1.458,21.798)
OP1: (13.190,6.054,15.964)
OP2: (14.843,5.220,17.745)
C4: (14.656,1.772,21.809)
O5': (12.520,4.344,17.673)
C3': (10.176,3.627,19.332)
C1': (11.077,1.488,19.691)
O4': (11.294,1.827,18.331)
C5': (11.306,3.879,17.039)
P: (13.718,4.955,16.815)
O2: (11.285,1.248,22.384)
C4': (10.512,3.002,17.989)
C2': (9.977,2.408,20.216)
O2': (8.724,1.792,20.012)
N1: (12.354,1.621,20.413)
N3: (13.524,1.536,22.468)
N4: (15.783,1.828,22.519)
C6: (13.519,1.882,19.746)
C5: (14.683,1.960,20.397)
O3': (9.003,4.409,19.246)
OP1: (13.190,6.054,15.964)
OP2: (14.843,5.220,17.745)
C4: (14.656,1.772,21.809)
O5': (12.520,4.344,17.673)
C3': (10.176,3.627,19.332)
C1': (11.077,1.488,19.691)
O4': (11.294,1.827,18.331)
C5': (11.306,3.879,17.039)
P: (13.718,4.955,16.815)
O2: (11.285,1.248,22.384)
C4': (10.512,3.002,17.989)
C2': (9.977,2.408,20.216)
O2': (8.724,1.792,20.012)
N1: (12.354,1.621,20.413)
N3: (13.524,1.536,22.468)
N4: (15.783,1.828,22.519)
C6: (13.519,1.882,19.746)
C5: (14.683,1.960,20.397)
O3': (9.003,4.409,19.246)
C4: (16.351,-0.768,20.586)
N3: (15.029,-0.858,20.237)
OP1: (19.374,4.428,15.904)
OP2: (19.450,3.435,18.279)
C2: (14.470,-0.529,19.030)
C1': (14.808,0.296,16.768)
C3': (14.866,2.633,16.435)
O5': (17.720,2.731,16.626)
O4': (15.883,0.583,15.892)
C5': (17.152,2.556,15.309)
P: (19.204,3.270,16.819)
C4': (15.771,1.952,15.419)
C2': (13.896,1.524,16.803)
O2': (12.869,1.386,15.844)
N1: (15.354,-0.059,18.085)
O4: (16.710,-1.177,21.690)
O2: (13.279,-0.645,18.819)
C6: (16.687,0.064,18.369)
C5: (17.203,-0.264,19.558)
O3': (14.186,3.745,15.868)
N3: (15.029,-0.858,20.237)
OP1: (19.374,4.428,15.904)
OP2: (19.450,3.435,18.279)
C2: (14.470,-0.529,19.030)
C1': (14.808,0.296,16.768)
C3': (14.866,2.633,16.435)
O5': (17.720,2.731,16.626)
O4': (15.883,0.583,15.892)
C5': (17.152,2.556,15.309)
P: (19.204,3.270,16.819)
C4': (15.771,1.952,15.419)
C2': (13.896,1.524,16.803)
O2': (12.869,1.386,15.844)
N1: (15.354,-0.059,18.085)
O4: (16.710,-1.177,21.690)
O2: (13.279,-0.645,18.819)
C6: (16.687,0.064,18.369)
C5: (17.203,-0.264,19.558)
O3': (14.186,3.745,15.868)
Image (generated by PyMOL):