Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:D4:D3
Extra
PDB:
ATOM 1 O3' U A 3 26.701 22.871 35.978 1.00 13.05 O
ATOM 2 P C A 4 27.948 22.267 35.135 1.00 11.05 P
ATOM 3 OP1 C A 4 27.422 21.706 33.889 1.00 12.20 O
ATOM 4 OP2 C A 4 28.810 21.435 36.000 1.00 12.27 O
ATOM 5 O5' C A 4 28.692 23.626 34.755 1.00 12.24 O
ATOM 6 C5' C A 4 27.947 24.743 34.238 1.00 12.43 C
ATOM 7 C4' C A 4 28.380 26.029 34.904 1.00 10.39 C
ATOM 8 O4' C A 4 28.160 25.945 36.341 1.00 14.01 O
ATOM 9 C3' C A 4 29.864 26.372 34.806 1.00 12.96 C
ATOM 10 O3' C A 4 30.123 26.913 33.538 1.00 11.57 O
ATOM 11 C2' C A 4 29.998 27.378 35.947 1.00 12.16 C
ATOM 12 O2' C A 4 29.392 28.630 35.618 1.00 14.37 O
ATOM 13 C1' C A 4 29.181 26.671 37.030 1.00 13.18 C
ATOM 14 N1 C A 4 29.981 25.715 37.827 1.00 11.65 N
ATOM 15 C2 C A 4 30.916 26.220 38.733 1.00 10.53 C
ATOM 16 O2 C A 4 31.003 27.460 38.878 1.00 14.62 O
ATOM 17 N3 C A 4 31.722 25.363 39.407 1.00 10.40 N
ATOM 18 C4 C A 4 31.602 24.046 39.186 1.00 11.18 C
ATOM 19 N4 C A 4 32.449 23.217 39.785 1.00 12.68 N
ATOM 20 C5 C A 4 30.599 23.511 38.304 1.00 12.58 C
ATOM 21 C6 C A 4 29.831 24.368 37.662 1.00 10.96 C
ATOM 22 P G A 5 31.594 26.794 32.898 1.00 12.43 P
ATOM 23 OP1 G A 5 31.507 27.216 31.493 1.00 14.28 O
ATOM 24 OP2 G A 5 32.161 25.446 33.199 1.00 13.18 O
ATOM 25 O5' G A 5 32.446 27.874 33.677 1.00 13.08 O
TER
ATOM 1 O3' G B 2 27.093 18.989 37.670 1.00 13.41 O
ATOM 2 P U B 3 25.886 18.698 36.652 1.00 12.10 P
ATOM 3 OP1 U B 3 25.425 17.298 36.861 1.00 13.94 O
ATOM 4 OP2 U B 3 26.252 19.119 35.316 1.00 12.33 O
ATOM 5 O5' U B 3 24.820 19.723 37.212 1.00 11.54 O
ATOM 6 C5' U B 3 24.376 20.822 36.436 1.00 10.28 C
ATOM 7 C4' U B 3 24.779 22.132 37.079 1.00 10.32 C
ATOM 8 O4' U B 3 24.247 22.230 38.416 1.00 11.32 O
ATOM 9 C3' U B 3 26.287 22.310 37.229 1.00 10.20 C
ATOM 10 O3' U B 3 26.701 22.871 35.978 1.00 13.05 O
ATOM 11 C2' U B 3 26.369 23.321 38.359 1.00 9.96 C
ATOM 12 O2' U B 3 26.129 24.652 37.902 1.00 11.87 O
ATOM 13 C1' U B 3 25.214 22.848 39.256 1.00 11.75 C
ATOM 14 N1 U B 3 25.588 21.897 40.320 1.00 10.74 N
ATOM 15 C2 U B 3 26.251 22.420 41.416 1.00 11.03 C
ATOM 16 O2 U B 3 26.596 23.586 41.478 1.00 11.44 O
ATOM 17 N3 U B 3 26.488 21.532 42.434 1.00 9.80 N
ATOM 18 C4 U B 3 26.141 20.170 42.454 1.00 12.73 C
ATOM 19 O4 U B 3 26.322 19.506 43.484 1.00 14.26 O
ATOM 20 C5 U B 3 25.494 19.700 41.281 1.00 12.09 C
ATOM 21 C6 U B 3 25.248 20.542 40.269 1.00 11.76 C
ATOM 22 P C B 4 27.948 22.267 35.135 1.00 11.05 P
ATOM 23 OP1 C B 4 27.422 21.706 33.889 1.00 12.20 O
ATOM 24 OP2 C B 4 28.810 21.435 36.000 1.00 12.27 O
ATOM 25 O5' C B 4 28.692 23.626 34.755 1.00 12.24 O
TER
ATOM 2 P C A 4 27.948 22.267 35.135 1.00 11.05 P
ATOM 3 OP1 C A 4 27.422 21.706 33.889 1.00 12.20 O
ATOM 4 OP2 C A 4 28.810 21.435 36.000 1.00 12.27 O
ATOM 5 O5' C A 4 28.692 23.626 34.755 1.00 12.24 O
ATOM 6 C5' C A 4 27.947 24.743 34.238 1.00 12.43 C
ATOM 7 C4' C A 4 28.380 26.029 34.904 1.00 10.39 C
ATOM 8 O4' C A 4 28.160 25.945 36.341 1.00 14.01 O
ATOM 9 C3' C A 4 29.864 26.372 34.806 1.00 12.96 C
ATOM 10 O3' C A 4 30.123 26.913 33.538 1.00 11.57 O
ATOM 11 C2' C A 4 29.998 27.378 35.947 1.00 12.16 C
ATOM 12 O2' C A 4 29.392 28.630 35.618 1.00 14.37 O
ATOM 13 C1' C A 4 29.181 26.671 37.030 1.00 13.18 C
ATOM 14 N1 C A 4 29.981 25.715 37.827 1.00 11.65 N
ATOM 15 C2 C A 4 30.916 26.220 38.733 1.00 10.53 C
ATOM 16 O2 C A 4 31.003 27.460 38.878 1.00 14.62 O
ATOM 17 N3 C A 4 31.722 25.363 39.407 1.00 10.40 N
ATOM 18 C4 C A 4 31.602 24.046 39.186 1.00 11.18 C
ATOM 19 N4 C A 4 32.449 23.217 39.785 1.00 12.68 N
ATOM 20 C5 C A 4 30.599 23.511 38.304 1.00 12.58 C
ATOM 21 C6 C A 4 29.831 24.368 37.662 1.00 10.96 C
ATOM 22 P G A 5 31.594 26.794 32.898 1.00 12.43 P
ATOM 23 OP1 G A 5 31.507 27.216 31.493 1.00 14.28 O
ATOM 24 OP2 G A 5 32.161 25.446 33.199 1.00 13.18 O
ATOM 25 O5' G A 5 32.446 27.874 33.677 1.00 13.08 O
TER
ATOM 1 O3' G B 2 27.093 18.989 37.670 1.00 13.41 O
ATOM 2 P U B 3 25.886 18.698 36.652 1.00 12.10 P
ATOM 3 OP1 U B 3 25.425 17.298 36.861 1.00 13.94 O
ATOM 4 OP2 U B 3 26.252 19.119 35.316 1.00 12.33 O
ATOM 5 O5' U B 3 24.820 19.723 37.212 1.00 11.54 O
ATOM 6 C5' U B 3 24.376 20.822 36.436 1.00 10.28 C
ATOM 7 C4' U B 3 24.779 22.132 37.079 1.00 10.32 C
ATOM 8 O4' U B 3 24.247 22.230 38.416 1.00 11.32 O
ATOM 9 C3' U B 3 26.287 22.310 37.229 1.00 10.20 C
ATOM 10 O3' U B 3 26.701 22.871 35.978 1.00 13.05 O
ATOM 11 C2' U B 3 26.369 23.321 38.359 1.00 9.96 C
ATOM 12 O2' U B 3 26.129 24.652 37.902 1.00 11.87 O
ATOM 13 C1' U B 3 25.214 22.848 39.256 1.00 11.75 C
ATOM 14 N1 U B 3 25.588 21.897 40.320 1.00 10.74 N
ATOM 15 C2 U B 3 26.251 22.420 41.416 1.00 11.03 C
ATOM 16 O2 U B 3 26.596 23.586 41.478 1.00 11.44 O
ATOM 17 N3 U B 3 26.488 21.532 42.434 1.00 9.80 N
ATOM 18 C4 U B 3 26.141 20.170 42.454 1.00 12.73 C
ATOM 19 O4 U B 3 26.322 19.506 43.484 1.00 14.26 O
ATOM 20 C5 U B 3 25.494 19.700 41.281 1.00 12.09 C
ATOM 21 C6 U B 3 25.248 20.542 40.269 1.00 11.76 C
ATOM 22 P C B 4 27.948 22.267 35.135 1.00 11.05 P
ATOM 23 OP1 C B 4 27.422 21.706 33.889 1.00 12.20 O
ATOM 24 OP2 C B 4 28.810 21.435 36.000 1.00 12.27 O
ATOM 25 O5' C B 4 28.692 23.626 34.755 1.00 12.24 O
TER
Atoms:
C2: (30.916,26.220,38.733)
OP1: (27.422,21.706,33.889)
OP2: (28.810,21.435,36.000)
C4: (31.602,24.046,39.186)
O5': (28.692,23.626,34.755)
C3': (29.864,26.372,34.806)
C1': (29.181,26.671,37.030)
O4': (28.160,25.945,36.341)
C5': (27.947,24.743,34.238)
P: (27.948,22.267,35.135)
O2: (31.003,27.460,38.878)
C4': (28.380,26.029,34.904)
C2': (29.998,27.378,35.947)
O2': (29.392,28.630,35.618)
N1: (29.981,25.715,37.827)
N3: (31.722,25.363,39.407)
N4: (32.449,23.217,39.785)
C6: (29.831,24.368,37.662)
C5: (30.599,23.511,38.304)
O3': (30.123,26.913,33.538)
OP1: (27.422,21.706,33.889)
OP2: (28.810,21.435,36.000)
C4: (31.602,24.046,39.186)
O5': (28.692,23.626,34.755)
C3': (29.864,26.372,34.806)
C1': (29.181,26.671,37.030)
O4': (28.160,25.945,36.341)
C5': (27.947,24.743,34.238)
P: (27.948,22.267,35.135)
O2: (31.003,27.460,38.878)
C4': (28.380,26.029,34.904)
C2': (29.998,27.378,35.947)
O2': (29.392,28.630,35.618)
N1: (29.981,25.715,37.827)
N3: (31.722,25.363,39.407)
N4: (32.449,23.217,39.785)
C6: (29.831,24.368,37.662)
C5: (30.599,23.511,38.304)
O3': (30.123,26.913,33.538)
C4: (26.141,20.170,42.454)
N3: (26.488,21.532,42.434)
OP1: (25.425,17.298,36.861)
OP2: (26.252,19.119,35.316)
C2: (26.251,22.420,41.416)
C1': (25.214,22.848,39.256)
C3': (26.287,22.310,37.229)
O5': (24.820,19.723,37.212)
O4': (24.247,22.230,38.416)
C5': (24.376,20.822,36.436)
P: (25.886,18.698,36.652)
C4': (24.779,22.132,37.079)
C2': (26.369,23.321,38.359)
O2': (26.129,24.652,37.902)
N1: (25.588,21.897,40.320)
O4: (26.322,19.506,43.484)
O2: (26.596,23.586,41.478)
C6: (25.248,20.542,40.269)
C5: (25.494,19.700,41.281)
O3': (26.701,22.871,35.978)
N3: (26.488,21.532,42.434)
OP1: (25.425,17.298,36.861)
OP2: (26.252,19.119,35.316)
C2: (26.251,22.420,41.416)
C1': (25.214,22.848,39.256)
C3': (26.287,22.310,37.229)
O5': (24.820,19.723,37.212)
O4': (24.247,22.230,38.416)
C5': (24.376,20.822,36.436)
P: (25.886,18.698,36.652)
C4': (24.779,22.132,37.079)
C2': (26.369,23.321,38.359)
O2': (26.129,24.652,37.902)
N1: (25.588,21.897,40.320)
O4: (26.322,19.506,43.484)
O2: (26.596,23.586,41.478)
C6: (25.248,20.542,40.269)
C5: (25.494,19.700,41.281)
O3': (26.701,22.871,35.978)
Image (generated by PyMOL):