Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:928:927
Extra
PDB:
ATOM 1 O3' U A 27 70.265 17.309 101.141 1.00 71.48 O
ATOM 2 P C A 28 71.568 17.154 100.222 1.00 70.79 P
ATOM 3 OP1 C A 28 71.916 18.499 99.717 1.00 71.07 O
ATOM 4 OP2 C A 28 71.337 16.048 99.256 1.00 70.66 O
ATOM 5 O5' C A 28 72.690 16.722 101.265 1.00 72.87 O
ATOM 6 C5' C A 28 72.940 17.519 102.440 1.00 74.72 C
ATOM 7 C4' C A 28 72.873 16.663 103.688 1.00 76.78 C
ATOM 8 O4' C A 28 71.596 15.958 103.728 1.00 77.06 O
ATOM 9 C3' C A 28 73.895 15.543 103.812 1.00 76.39 C
ATOM 10 O3' C A 28 75.179 15.991 104.253 1.00 75.84 O
ATOM 11 C2' C A 28 73.227 14.623 104.826 1.00 75.82 C
ATOM 12 O2' C A 28 73.335 15.096 106.153 1.00 74.02 O
ATOM 13 C1' C A 28 71.764 14.707 104.383 1.00 76.73 C
ATOM 14 N1 C A 28 71.371 13.615 103.464 1.00 77.42 N
ATOM 15 C2 C A 28 71.281 12.304 103.971 1.00 77.85 C
ATOM 16 O2 C A 28 71.548 12.098 105.168 1.00 78.34 O
ATOM 17 N3 C A 28 70.910 11.299 103.145 1.00 77.78 N
ATOM 18 C4 C A 28 70.634 11.554 101.865 1.00 77.54 C
ATOM 19 N4 C A 28 70.261 10.531 101.094 1.00 77.19 N
ATOM 20 C5 C A 28 70.725 12.871 101.320 1.00 77.54 C
ATOM 21 C6 C A 28 71.094 13.860 102.146 1.00 77.60 C
ATOM 22 P C A 29 76.510 15.361 103.596 1.00 76.16 P
ATOM 23 OP1 C A 29 77.610 15.513 104.577 1.00 75.12 O
ATOM 24 OP2 C A 29 76.679 15.883 102.216 1.00 75.43 O
ATOM 25 O5' C A 29 76.188 13.809 103.458 1.00 77.52 O
TER
ATOM 1 O3' C B 26 64.776 16.683 97.233 1.00 72.85 O
ATOM 2 P U B 27 66.338 16.392 97.030 1.00 72.76 P
ATOM 3 OP1 U B 27 66.736 16.967 95.711 1.00 72.57 O
ATOM 4 OP2 U B 27 66.584 14.955 97.302 1.00 73.16 O
ATOM 5 O5' U B 27 66.991 17.251 98.198 1.00 71.48 O
ATOM 6 C5' U B 27 68.196 16.837 98.825 1.00 71.08 C
ATOM 7 C4' U B 27 68.046 16.906 100.319 1.00 71.62 C
ATOM 8 O4' U B 27 66.933 16.078 100.741 1.00 72.28 O
ATOM 9 C3' U B 27 69.237 16.340 101.061 1.00 71.52 C
ATOM 10 O3' U B 27 70.265 17.309 101.141 1.00 71.48 O
ATOM 11 C2' U B 27 68.637 15.948 102.402 1.00 71.51 C
ATOM 12 O2' U B 27 68.474 17.033 103.291 1.00 69.43 O
ATOM 13 C1' U B 27 67.264 15.423 101.962 1.00 73.06 C
ATOM 14 N1 U B 27 67.212 13.963 101.743 1.00 73.91 N
ATOM 15 C2 U B 27 67.615 13.130 102.786 1.00 74.51 C
ATOM 16 O2 U B 27 68.037 13.551 103.854 1.00 74.19 O
ATOM 17 N3 U B 27 67.515 11.784 102.526 1.00 75.04 N
ATOM 18 C4 U B 27 67.079 11.189 101.361 1.00 75.61 C
ATOM 19 O4 U B 27 67.043 9.956 101.287 1.00 76.20 O
ATOM 20 C5 U B 27 66.696 12.109 100.327 1.00 74.37 C
ATOM 21 C6 U B 27 66.772 13.427 100.547 1.00 73.53 C
ATOM 22 P C B 28 71.568 17.154 100.222 1.00 70.79 P
ATOM 23 OP1 C B 28 71.916 18.499 99.717 1.00 71.07 O
ATOM 24 OP2 C B 28 71.337 16.048 99.256 1.00 70.66 O
ATOM 25 O5' C B 28 72.690 16.722 101.265 1.00 72.87 O
TER
ATOM 2 P C A 28 71.568 17.154 100.222 1.00 70.79 P
ATOM 3 OP1 C A 28 71.916 18.499 99.717 1.00 71.07 O
ATOM 4 OP2 C A 28 71.337 16.048 99.256 1.00 70.66 O
ATOM 5 O5' C A 28 72.690 16.722 101.265 1.00 72.87 O
ATOM 6 C5' C A 28 72.940 17.519 102.440 1.00 74.72 C
ATOM 7 C4' C A 28 72.873 16.663 103.688 1.00 76.78 C
ATOM 8 O4' C A 28 71.596 15.958 103.728 1.00 77.06 O
ATOM 9 C3' C A 28 73.895 15.543 103.812 1.00 76.39 C
ATOM 10 O3' C A 28 75.179 15.991 104.253 1.00 75.84 O
ATOM 11 C2' C A 28 73.227 14.623 104.826 1.00 75.82 C
ATOM 12 O2' C A 28 73.335 15.096 106.153 1.00 74.02 O
ATOM 13 C1' C A 28 71.764 14.707 104.383 1.00 76.73 C
ATOM 14 N1 C A 28 71.371 13.615 103.464 1.00 77.42 N
ATOM 15 C2 C A 28 71.281 12.304 103.971 1.00 77.85 C
ATOM 16 O2 C A 28 71.548 12.098 105.168 1.00 78.34 O
ATOM 17 N3 C A 28 70.910 11.299 103.145 1.00 77.78 N
ATOM 18 C4 C A 28 70.634 11.554 101.865 1.00 77.54 C
ATOM 19 N4 C A 28 70.261 10.531 101.094 1.00 77.19 N
ATOM 20 C5 C A 28 70.725 12.871 101.320 1.00 77.54 C
ATOM 21 C6 C A 28 71.094 13.860 102.146 1.00 77.60 C
ATOM 22 P C A 29 76.510 15.361 103.596 1.00 76.16 P
ATOM 23 OP1 C A 29 77.610 15.513 104.577 1.00 75.12 O
ATOM 24 OP2 C A 29 76.679 15.883 102.216 1.00 75.43 O
ATOM 25 O5' C A 29 76.188 13.809 103.458 1.00 77.52 O
TER
ATOM 1 O3' C B 26 64.776 16.683 97.233 1.00 72.85 O
ATOM 2 P U B 27 66.338 16.392 97.030 1.00 72.76 P
ATOM 3 OP1 U B 27 66.736 16.967 95.711 1.00 72.57 O
ATOM 4 OP2 U B 27 66.584 14.955 97.302 1.00 73.16 O
ATOM 5 O5' U B 27 66.991 17.251 98.198 1.00 71.48 O
ATOM 6 C5' U B 27 68.196 16.837 98.825 1.00 71.08 C
ATOM 7 C4' U B 27 68.046 16.906 100.319 1.00 71.62 C
ATOM 8 O4' U B 27 66.933 16.078 100.741 1.00 72.28 O
ATOM 9 C3' U B 27 69.237 16.340 101.061 1.00 71.52 C
ATOM 10 O3' U B 27 70.265 17.309 101.141 1.00 71.48 O
ATOM 11 C2' U B 27 68.637 15.948 102.402 1.00 71.51 C
ATOM 12 O2' U B 27 68.474 17.033 103.291 1.00 69.43 O
ATOM 13 C1' U B 27 67.264 15.423 101.962 1.00 73.06 C
ATOM 14 N1 U B 27 67.212 13.963 101.743 1.00 73.91 N
ATOM 15 C2 U B 27 67.615 13.130 102.786 1.00 74.51 C
ATOM 16 O2 U B 27 68.037 13.551 103.854 1.00 74.19 O
ATOM 17 N3 U B 27 67.515 11.784 102.526 1.00 75.04 N
ATOM 18 C4 U B 27 67.079 11.189 101.361 1.00 75.61 C
ATOM 19 O4 U B 27 67.043 9.956 101.287 1.00 76.20 O
ATOM 20 C5 U B 27 66.696 12.109 100.327 1.00 74.37 C
ATOM 21 C6 U B 27 66.772 13.427 100.547 1.00 73.53 C
ATOM 22 P C B 28 71.568 17.154 100.222 1.00 70.79 P
ATOM 23 OP1 C B 28 71.916 18.499 99.717 1.00 71.07 O
ATOM 24 OP2 C B 28 71.337 16.048 99.256 1.00 70.66 O
ATOM 25 O5' C B 28 72.690 16.722 101.265 1.00 72.87 O
TER
Atoms:
C2: (71.281,12.304,103.971)
OP1: (71.916,18.499,99.717)
OP2: (71.337,16.048,99.256)
C4: (70.634,11.554,101.865)
O5': (72.690,16.722,101.265)
C3': (73.895,15.543,103.812)
C1': (71.764,14.707,104.383)
O4': (71.596,15.958,103.728)
C5': (72.940,17.519,102.440)
P: (71.568,17.154,100.222)
O2: (71.548,12.098,105.168)
C4': (72.873,16.663,103.688)
C2': (73.227,14.623,104.826)
O2': (73.335,15.096,106.153)
N1: (71.371,13.615,103.464)
N3: (70.910,11.299,103.145)
N4: (70.261,10.531,101.094)
C6: (71.094,13.860,102.146)
C5: (70.725,12.871,101.320)
O3': (75.179,15.991,104.253)
OP1: (71.916,18.499,99.717)
OP2: (71.337,16.048,99.256)
C4: (70.634,11.554,101.865)
O5': (72.690,16.722,101.265)
C3': (73.895,15.543,103.812)
C1': (71.764,14.707,104.383)
O4': (71.596,15.958,103.728)
C5': (72.940,17.519,102.440)
P: (71.568,17.154,100.222)
O2: (71.548,12.098,105.168)
C4': (72.873,16.663,103.688)
C2': (73.227,14.623,104.826)
O2': (73.335,15.096,106.153)
N1: (71.371,13.615,103.464)
N3: (70.910,11.299,103.145)
N4: (70.261,10.531,101.094)
C6: (71.094,13.860,102.146)
C5: (70.725,12.871,101.320)
O3': (75.179,15.991,104.253)
C4: (67.079,11.189,101.361)
N3: (67.515,11.784,102.526)
OP1: (66.736,16.967,95.711)
OP2: (66.584,14.955,97.302)
C2: (67.615,13.130,102.786)
C1': (67.264,15.423,101.962)
C3': (69.237,16.340,101.061)
O5': (66.991,17.251,98.198)
O4': (66.933,16.078,100.741)
C5': (68.196,16.837,98.825)
P: (66.338,16.392,97.030)
C4': (68.046,16.906,100.319)
C2': (68.637,15.948,102.402)
O2': (68.474,17.033,103.291)
N1: (67.212,13.963,101.743)
O4: (67.043,9.956,101.287)
O2: (68.037,13.551,103.854)
C6: (66.772,13.427,100.547)
C5: (66.696,12.109,100.327)
O3': (70.265,17.309,101.141)
N3: (67.515,11.784,102.526)
OP1: (66.736,16.967,95.711)
OP2: (66.584,14.955,97.302)
C2: (67.615,13.130,102.786)
C1': (67.264,15.423,101.962)
C3': (69.237,16.340,101.061)
O5': (66.991,17.251,98.198)
O4': (66.933,16.078,100.741)
C5': (68.196,16.837,98.825)
P: (66.338,16.392,97.030)
C4': (68.046,16.906,100.319)
C2': (68.637,15.948,102.402)
O2': (68.474,17.033,103.291)
N1: (67.212,13.963,101.743)
O4: (67.043,9.956,101.287)
O2: (68.037,13.551,103.854)
C6: (66.772,13.427,100.547)
C5: (66.696,12.109,100.327)
O3': (70.265,17.309,101.141)
Image (generated by PyMOL):