Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:C4:C3
Extra
PDB:
ATOM 1 O3' U A 3 44.201 23.101 44.221 1.00 12.20 O
ATOM 2 P C A 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 3 OP1 C A 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 4 OP2 C A 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 5 O5' C A 4 42.302 23.764 45.611 1.00 11.12 O
ATOM 6 C5' C A 4 43.023 24.879 46.123 1.00 12.56 C
ATOM 7 C4' C A 4 42.475 26.164 45.563 1.00 11.84 C
ATOM 8 O4' C A 4 42.689 26.216 44.136 1.00 12.95 O
ATOM 9 C3' C A 4 40.971 26.382 45.701 1.00 11.90 C
ATOM 10 O3' C A 4 40.695 26.818 47.026 1.00 11.61 O
ATOM 11 C2' C A 4 40.744 27.443 44.634 1.00 11.90 C
ATOM 12 O2' C A 4 41.205 28.735 44.990 1.00 15.39 O
ATOM 13 C1' C A 4 41.597 26.866 43.504 1.00 12.85 C
ATOM 14 N1 C A 4 40.844 25.867 42.728 1.00 11.29 N
ATOM 15 C2 C A 4 39.845 26.356 41.882 1.00 12.29 C
ATOM 16 O2 C A 4 39.698 27.584 41.814 1.00 13.40 O
ATOM 17 N3 C A 4 39.071 25.501 41.180 1.00 10.12 N
ATOM 18 C4 C A 4 39.247 24.179 41.312 1.00 12.02 C
ATOM 19 N4 C A 4 38.384 23.381 40.672 1.00 13.39 N
ATOM 20 C5 C A 4 40.292 23.635 42.133 1.00 12.92 C
ATOM 21 C6 C A 4 41.068 24.515 42.817 1.00 11.14 C
ATOM 22 P G A 5 39.238 26.585 47.669 1.00 13.48 P
ATOM 23 OP1 G A 5 39.357 26.941 49.092 1.00 14.53 O
ATOM 24 OP2 G A 5 38.697 25.247 47.292 1.00 12.40 O
ATOM 25 O5' G A 5 38.331 27.648 46.904 1.00 13.94 O
TER
ATOM 1 O3' G B 2 43.874 19.203 42.590 1.00 13.41 O
ATOM 2 P U B 3 45.159 18.901 43.496 1.00 12.31 P
ATOM 3 OP1 U B 3 45.668 17.517 43.210 1.00 14.00 O
ATOM 4 OP2 U B 3 44.818 19.242 44.893 1.00 12.64 O
ATOM 5 O5' U B 3 46.189 19.966 42.912 1.00 11.21 O
ATOM 6 C5' U B 3 46.629 21.086 43.680 1.00 11.58 C
ATOM 7 C4' U B 3 46.110 22.384 43.090 1.00 12.12 C
ATOM 8 O4' U B 3 46.583 22.518 41.738 1.00 12.41 O
ATOM 9 C3' U B 3 44.594 22.515 42.986 1.00 11.11 C
ATOM 10 O3' U B 3 44.201 23.101 44.221 1.00 12.20 O
ATOM 11 C2' U B 3 44.444 23.533 41.854 1.00 9.93 C
ATOM 12 O2' U B 3 44.692 24.858 42.279 1.00 13.52 O
ATOM 13 C1' U B 3 45.578 23.108 40.931 1.00 12.54 C
ATOM 14 N1 U B 3 45.192 22.177 39.850 1.00 11.34 N
ATOM 15 C2 U B 3 44.525 22.736 38.763 1.00 10.90 C
ATOM 16 O2 U B 3 44.188 23.913 38.734 1.00 11.82 O
ATOM 17 N3 U B 3 44.265 21.876 37.729 1.00 12.34 N
ATOM 18 C4 U B 3 44.587 20.528 37.686 1.00 12.75 C
ATOM 19 O4 U B 3 44.254 19.881 36.680 1.00 14.44 O
ATOM 20 C5 U B 3 45.265 20.017 38.864 1.00 10.89 C
ATOM 21 C6 U B 3 45.521 20.847 39.887 1.00 10.18 C
ATOM 22 P C B 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 23 OP1 C B 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 24 OP2 C B 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 25 O5' C B 4 42.302 23.764 45.611 1.00 11.12 O
TER
ATOM 2 P C A 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 3 OP1 C A 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 4 OP2 C A 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 5 O5' C A 4 42.302 23.764 45.611 1.00 11.12 O
ATOM 6 C5' C A 4 43.023 24.879 46.123 1.00 12.56 C
ATOM 7 C4' C A 4 42.475 26.164 45.563 1.00 11.84 C
ATOM 8 O4' C A 4 42.689 26.216 44.136 1.00 12.95 O
ATOM 9 C3' C A 4 40.971 26.382 45.701 1.00 11.90 C
ATOM 10 O3' C A 4 40.695 26.818 47.026 1.00 11.61 O
ATOM 11 C2' C A 4 40.744 27.443 44.634 1.00 11.90 C
ATOM 12 O2' C A 4 41.205 28.735 44.990 1.00 15.39 O
ATOM 13 C1' C A 4 41.597 26.866 43.504 1.00 12.85 C
ATOM 14 N1 C A 4 40.844 25.867 42.728 1.00 11.29 N
ATOM 15 C2 C A 4 39.845 26.356 41.882 1.00 12.29 C
ATOM 16 O2 C A 4 39.698 27.584 41.814 1.00 13.40 O
ATOM 17 N3 C A 4 39.071 25.501 41.180 1.00 10.12 N
ATOM 18 C4 C A 4 39.247 24.179 41.312 1.00 12.02 C
ATOM 19 N4 C A 4 38.384 23.381 40.672 1.00 13.39 N
ATOM 20 C5 C A 4 40.292 23.635 42.133 1.00 12.92 C
ATOM 21 C6 C A 4 41.068 24.515 42.817 1.00 11.14 C
ATOM 22 P G A 5 39.238 26.585 47.669 1.00 13.48 P
ATOM 23 OP1 G A 5 39.357 26.941 49.092 1.00 14.53 O
ATOM 24 OP2 G A 5 38.697 25.247 47.292 1.00 12.40 O
ATOM 25 O5' G A 5 38.331 27.648 46.904 1.00 13.94 O
TER
ATOM 1 O3' G B 2 43.874 19.203 42.590 1.00 13.41 O
ATOM 2 P U B 3 45.159 18.901 43.496 1.00 12.31 P
ATOM 3 OP1 U B 3 45.668 17.517 43.210 1.00 14.00 O
ATOM 4 OP2 U B 3 44.818 19.242 44.893 1.00 12.64 O
ATOM 5 O5' U B 3 46.189 19.966 42.912 1.00 11.21 O
ATOM 6 C5' U B 3 46.629 21.086 43.680 1.00 11.58 C
ATOM 7 C4' U B 3 46.110 22.384 43.090 1.00 12.12 C
ATOM 8 O4' U B 3 46.583 22.518 41.738 1.00 12.41 O
ATOM 9 C3' U B 3 44.594 22.515 42.986 1.00 11.11 C
ATOM 10 O3' U B 3 44.201 23.101 44.221 1.00 12.20 O
ATOM 11 C2' U B 3 44.444 23.533 41.854 1.00 9.93 C
ATOM 12 O2' U B 3 44.692 24.858 42.279 1.00 13.52 O
ATOM 13 C1' U B 3 45.578 23.108 40.931 1.00 12.54 C
ATOM 14 N1 U B 3 45.192 22.177 39.850 1.00 11.34 N
ATOM 15 C2 U B 3 44.525 22.736 38.763 1.00 10.90 C
ATOM 16 O2 U B 3 44.188 23.913 38.734 1.00 11.82 O
ATOM 17 N3 U B 3 44.265 21.876 37.729 1.00 12.34 N
ATOM 18 C4 U B 3 44.587 20.528 37.686 1.00 12.75 C
ATOM 19 O4 U B 3 44.254 19.881 36.680 1.00 14.44 O
ATOM 20 C5 U B 3 45.265 20.017 38.864 1.00 10.89 C
ATOM 21 C6 U B 3 45.521 20.847 39.887 1.00 10.18 C
ATOM 22 P C B 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 23 OP1 C B 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 24 OP2 C B 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 25 O5' C B 4 42.302 23.764 45.611 1.00 11.12 O
TER
Atoms:
C2: (39.845,26.356,41.882)
OP1: (43.788,21.864,46.348)
OP2: (42.206,21.601,44.418)
C4: (39.247,24.179,41.312)
O5': (42.302,23.764,45.611)
C3': (40.971,26.382,45.701)
C1': (41.597,26.866,43.504)
O4': (42.689,26.216,44.136)
C5': (43.023,24.879,46.123)
P: (43.096,22.435,45.172)
O2: (39.698,27.584,41.814)
C4': (42.475,26.164,45.563)
C2': (40.744,27.443,44.634)
O2': (41.205,28.735,44.990)
N1: (40.844,25.867,42.728)
N3: (39.071,25.501,41.180)
N4: (38.384,23.381,40.672)
C6: (41.068,24.515,42.817)
C5: (40.292,23.635,42.133)
O3': (40.695,26.818,47.026)
OP1: (43.788,21.864,46.348)
OP2: (42.206,21.601,44.418)
C4: (39.247,24.179,41.312)
O5': (42.302,23.764,45.611)
C3': (40.971,26.382,45.701)
C1': (41.597,26.866,43.504)
O4': (42.689,26.216,44.136)
C5': (43.023,24.879,46.123)
P: (43.096,22.435,45.172)
O2: (39.698,27.584,41.814)
C4': (42.475,26.164,45.563)
C2': (40.744,27.443,44.634)
O2': (41.205,28.735,44.990)
N1: (40.844,25.867,42.728)
N3: (39.071,25.501,41.180)
N4: (38.384,23.381,40.672)
C6: (41.068,24.515,42.817)
C5: (40.292,23.635,42.133)
O3': (40.695,26.818,47.026)
C4: (44.587,20.528,37.686)
N3: (44.265,21.876,37.729)
OP1: (45.668,17.517,43.210)
OP2: (44.818,19.242,44.893)
C2: (44.525,22.736,38.763)
C1': (45.578,23.108,40.931)
C3': (44.594,22.515,42.986)
O5': (46.189,19.966,42.912)
O4': (46.583,22.518,41.738)
C5': (46.629,21.086,43.680)
P: (45.159,18.901,43.496)
C4': (46.110,22.384,43.090)
C2': (44.444,23.533,41.854)
O2': (44.692,24.858,42.279)
N1: (45.192,22.177,39.850)
O4: (44.254,19.881,36.680)
O2: (44.188,23.913,38.734)
C6: (45.521,20.847,39.887)
C5: (45.265,20.017,38.864)
O3': (44.201,23.101,44.221)
N3: (44.265,21.876,37.729)
OP1: (45.668,17.517,43.210)
OP2: (44.818,19.242,44.893)
C2: (44.525,22.736,38.763)
C1': (45.578,23.108,40.931)
C3': (44.594,22.515,42.986)
O5': (46.189,19.966,42.912)
O4': (46.583,22.518,41.738)
C5': (46.629,21.086,43.680)
P: (45.159,18.901,43.496)
C4': (46.110,22.384,43.090)
C2': (44.444,23.533,41.854)
O2': (44.692,24.858,42.279)
N1: (45.192,22.177,39.850)
O4: (44.254,19.881,36.680)
O2: (44.188,23.913,38.734)
C6: (45.521,20.847,39.887)
C5: (45.265,20.017,38.864)
O3': (44.201,23.101,44.221)
Image (generated by PyMOL):