Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01197:01196
Extra
PDB:
ATOM 1 O3' U A1196 39.459 110.501 125.853 1.00 44.20 O
ATOM 2 P C A1197 40.118 109.090 125.449 1.00 46.56 P
ATOM 3 OP1 C A1197 40.730 108.598 126.714 1.00 45.34 O
ATOM 4 OP2 C A1197 40.955 109.213 124.216 1.00 46.70 O
ATOM 5 O5' C A1197 38.882 108.144 125.092 1.00 45.77 O
ATOM 6 C5' C A1197 38.089 108.332 123.896 1.00 41.64 C
ATOM 7 C4' C A1197 36.896 107.412 123.946 1.00 40.17 C
ATOM 8 O4' C A1197 36.193 107.643 125.190 1.00 39.79 O
ATOM 9 C3' C A1197 35.821 107.580 122.888 1.00 40.17 C
ATOM 10 O3' C A1197 36.130 106.837 121.724 1.00 43.69 O
ATOM 11 C2' C A1197 34.621 106.926 123.564 1.00 39.69 C
ATOM 12 O2' C A1197 34.667 105.511 123.503 1.00 38.77 O
ATOM 13 C1' C A1197 34.814 107.363 125.018 1.00 37.70 C
ATOM 14 N1 C A1197 34.021 108.560 125.365 1.00 35.43 N
ATOM 15 C2 C A1197 32.647 108.410 125.519 1.00 34.62 C
ATOM 16 O2 C A1197 32.165 107.277 125.441 1.00 37.76 O
ATOM 17 N3 C A1197 31.880 109.494 125.757 1.00 32.99 N
ATOM 18 C4 C A1197 32.445 110.694 125.866 1.00 33.21 C
ATOM 19 N4 C A1197 31.643 111.740 126.073 1.00 33.28 N
ATOM 20 C5 C A1197 33.854 110.876 125.761 1.00 31.31 C
ATOM 21 C6 C A1197 34.599 109.792 125.511 1.00 32.95 C
ATOM 22 P G A1198 36.898 107.535 120.498 1.00 47.42 P
ATOM 23 OP1 G A1198 36.804 106.567 119.358 1.00 44.42 O
ATOM 24 OP2 G A1198 38.238 108.017 120.966 1.00 46.47 O
ATOM 25 O5' G A1198 36.037 108.829 120.170 1.00 41.86 O
TER
ATOM 1 O3' A B1195 44.126 114.994 125.958 1.00 36.11 O
ATOM 2 P U B1196 43.866 114.179 124.609 1.00 40.24 P
ATOM 3 OP1 U B1196 44.885 113.100 124.525 1.00 38.54 O
ATOM 4 OP2 U B1196 43.758 115.186 123.518 1.00 40.42 O
ATOM 5 O5' U B1196 42.436 113.512 124.823 1.00 39.69 O
ATOM 6 C5' U B1196 42.184 112.723 125.990 1.00 43.30 C
ATOM 7 C4' U B1196 40.699 112.540 126.210 1.00 42.89 C
ATOM 8 O4' U B1196 40.018 113.810 126.282 1.00 41.65 O
ATOM 9 C3' U B1196 39.901 111.693 125.216 1.00 42.61 C
ATOM 10 O3' U B1196 39.459 110.501 125.853 1.00 44.20 O
ATOM 11 C2' U B1196 38.700 112.578 124.865 1.00 42.20 C
ATOM 12 O2' U B1196 37.474 111.875 124.829 1.00 41.88 O
ATOM 13 C1' U B1196 38.664 113.568 126.023 1.00 41.41 C
ATOM 14 N1 U B1196 38.010 114.825 125.637 1.00 40.83 N
ATOM 15 C2 U B1196 36.929 115.236 126.391 1.00 41.00 C
ATOM 16 O2 U B1196 36.572 114.661 127.406 1.00 41.49 O
ATOM 17 N3 U B1196 36.281 116.344 125.912 1.00 41.02 N
ATOM 18 C4 U B1196 36.603 117.066 124.783 1.00 41.25 C
ATOM 19 O4 U B1196 35.889 118.007 124.445 1.00 42.41 O
ATOM 20 C5 U B1196 37.778 116.618 124.100 1.00 41.42 C
ATOM 21 C6 U B1196 38.427 115.545 124.541 1.00 38.97 C
ATOM 22 P C B1197 40.118 109.090 125.449 1.00 46.56 P
ATOM 23 OP1 C B1197 40.730 108.598 126.714 1.00 45.34 O
ATOM 24 OP2 C B1197 40.955 109.213 124.216 1.00 46.70 O
ATOM 25 O5' C B1197 38.882 108.144 125.092 1.00 45.77 O
TER
ATOM 2 P C A1197 40.118 109.090 125.449 1.00 46.56 P
ATOM 3 OP1 C A1197 40.730 108.598 126.714 1.00 45.34 O
ATOM 4 OP2 C A1197 40.955 109.213 124.216 1.00 46.70 O
ATOM 5 O5' C A1197 38.882 108.144 125.092 1.00 45.77 O
ATOM 6 C5' C A1197 38.089 108.332 123.896 1.00 41.64 C
ATOM 7 C4' C A1197 36.896 107.412 123.946 1.00 40.17 C
ATOM 8 O4' C A1197 36.193 107.643 125.190 1.00 39.79 O
ATOM 9 C3' C A1197 35.821 107.580 122.888 1.00 40.17 C
ATOM 10 O3' C A1197 36.130 106.837 121.724 1.00 43.69 O
ATOM 11 C2' C A1197 34.621 106.926 123.564 1.00 39.69 C
ATOM 12 O2' C A1197 34.667 105.511 123.503 1.00 38.77 O
ATOM 13 C1' C A1197 34.814 107.363 125.018 1.00 37.70 C
ATOM 14 N1 C A1197 34.021 108.560 125.365 1.00 35.43 N
ATOM 15 C2 C A1197 32.647 108.410 125.519 1.00 34.62 C
ATOM 16 O2 C A1197 32.165 107.277 125.441 1.00 37.76 O
ATOM 17 N3 C A1197 31.880 109.494 125.757 1.00 32.99 N
ATOM 18 C4 C A1197 32.445 110.694 125.866 1.00 33.21 C
ATOM 19 N4 C A1197 31.643 111.740 126.073 1.00 33.28 N
ATOM 20 C5 C A1197 33.854 110.876 125.761 1.00 31.31 C
ATOM 21 C6 C A1197 34.599 109.792 125.511 1.00 32.95 C
ATOM 22 P G A1198 36.898 107.535 120.498 1.00 47.42 P
ATOM 23 OP1 G A1198 36.804 106.567 119.358 1.00 44.42 O
ATOM 24 OP2 G A1198 38.238 108.017 120.966 1.00 46.47 O
ATOM 25 O5' G A1198 36.037 108.829 120.170 1.00 41.86 O
TER
ATOM 1 O3' A B1195 44.126 114.994 125.958 1.00 36.11 O
ATOM 2 P U B1196 43.866 114.179 124.609 1.00 40.24 P
ATOM 3 OP1 U B1196 44.885 113.100 124.525 1.00 38.54 O
ATOM 4 OP2 U B1196 43.758 115.186 123.518 1.00 40.42 O
ATOM 5 O5' U B1196 42.436 113.512 124.823 1.00 39.69 O
ATOM 6 C5' U B1196 42.184 112.723 125.990 1.00 43.30 C
ATOM 7 C4' U B1196 40.699 112.540 126.210 1.00 42.89 C
ATOM 8 O4' U B1196 40.018 113.810 126.282 1.00 41.65 O
ATOM 9 C3' U B1196 39.901 111.693 125.216 1.00 42.61 C
ATOM 10 O3' U B1196 39.459 110.501 125.853 1.00 44.20 O
ATOM 11 C2' U B1196 38.700 112.578 124.865 1.00 42.20 C
ATOM 12 O2' U B1196 37.474 111.875 124.829 1.00 41.88 O
ATOM 13 C1' U B1196 38.664 113.568 126.023 1.00 41.41 C
ATOM 14 N1 U B1196 38.010 114.825 125.637 1.00 40.83 N
ATOM 15 C2 U B1196 36.929 115.236 126.391 1.00 41.00 C
ATOM 16 O2 U B1196 36.572 114.661 127.406 1.00 41.49 O
ATOM 17 N3 U B1196 36.281 116.344 125.912 1.00 41.02 N
ATOM 18 C4 U B1196 36.603 117.066 124.783 1.00 41.25 C
ATOM 19 O4 U B1196 35.889 118.007 124.445 1.00 42.41 O
ATOM 20 C5 U B1196 37.778 116.618 124.100 1.00 41.42 C
ATOM 21 C6 U B1196 38.427 115.545 124.541 1.00 38.97 C
ATOM 22 P C B1197 40.118 109.090 125.449 1.00 46.56 P
ATOM 23 OP1 C B1197 40.730 108.598 126.714 1.00 45.34 O
ATOM 24 OP2 C B1197 40.955 109.213 124.216 1.00 46.70 O
ATOM 25 O5' C B1197 38.882 108.144 125.092 1.00 45.77 O
TER
Atoms:
C2: (32.647,108.410,125.519)
OP1: (40.730,108.598,126.714)
OP2: (40.955,109.213,124.216)
C4: (32.445,110.694,125.866)
O5': (38.882,108.144,125.092)
C3': (35.821,107.580,122.888)
C1': (34.814,107.363,125.018)
O4': (36.193,107.643,125.190)
C5': (38.089,108.332,123.896)
P: (40.118,109.090,125.449)
O2: (32.165,107.277,125.441)
C4': (36.896,107.412,123.946)
C2': (34.621,106.926,123.564)
O2': (34.667,105.511,123.503)
N1: (34.021,108.560,125.365)
N3: (31.880,109.494,125.757)
N4: (31.643,111.740,126.073)
C6: (34.599,109.792,125.511)
C5: (33.854,110.876,125.761)
O3': (36.130,106.837,121.724)
OP1: (40.730,108.598,126.714)
OP2: (40.955,109.213,124.216)
C4: (32.445,110.694,125.866)
O5': (38.882,108.144,125.092)
C3': (35.821,107.580,122.888)
C1': (34.814,107.363,125.018)
O4': (36.193,107.643,125.190)
C5': (38.089,108.332,123.896)
P: (40.118,109.090,125.449)
O2: (32.165,107.277,125.441)
C4': (36.896,107.412,123.946)
C2': (34.621,106.926,123.564)
O2': (34.667,105.511,123.503)
N1: (34.021,108.560,125.365)
N3: (31.880,109.494,125.757)
N4: (31.643,111.740,126.073)
C6: (34.599,109.792,125.511)
C5: (33.854,110.876,125.761)
O3': (36.130,106.837,121.724)
C4: (36.603,117.066,124.783)
N3: (36.281,116.344,125.912)
OP1: (44.885,113.100,124.525)
OP2: (43.758,115.186,123.518)
C2: (36.929,115.236,126.391)
C1': (38.664,113.568,126.023)
C3': (39.901,111.693,125.216)
O5': (42.436,113.512,124.823)
O4': (40.018,113.810,126.282)
C5': (42.184,112.723,125.990)
P: (43.866,114.179,124.609)
C4': (40.699,112.540,126.210)
C2': (38.700,112.578,124.865)
O2': (37.474,111.875,124.829)
N1: (38.010,114.825,125.637)
O4: (35.889,118.007,124.445)
O2: (36.572,114.661,127.406)
C6: (38.427,115.545,124.541)
C5: (37.778,116.618,124.100)
O3': (39.459,110.501,125.853)
N3: (36.281,116.344,125.912)
OP1: (44.885,113.100,124.525)
OP2: (43.758,115.186,123.518)
C2: (36.929,115.236,126.391)
C1': (38.664,113.568,126.023)
C3': (39.901,111.693,125.216)
O5': (42.436,113.512,124.823)
O4': (40.018,113.810,126.282)
C5': (42.184,112.723,125.990)
P: (43.866,114.179,124.609)
C4': (40.699,112.540,126.210)
C2': (38.700,112.578,124.865)
O2': (37.474,111.875,124.829)
N1: (38.010,114.825,125.637)
O4: (35.889,118.007,124.445)
O2: (36.572,114.661,127.406)
C6: (38.427,115.545,124.541)
C5: (37.778,116.618,124.100)
O3': (39.459,110.501,125.853)
Image (generated by PyMOL):