Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0597:0596
Extra
PDB:
ATOM 1 O3' A A 596 10.884 124.371 85.309 1.00 52.28 O
ATOM 2 P U A 597 12.097 124.770 86.292 1.00 51.55 P
ATOM 3 OP1 U A 597 13.326 124.186 85.706 1.00 51.33 O
ATOM 4 OP2 U A 597 11.736 124.471 87.699 1.00 49.33 O
ATOM 5 O5' U A 597 12.201 126.351 86.172 1.00 49.81 O
ATOM 6 C5' U A 597 12.528 126.983 84.931 1.00 48.85 C
ATOM 7 C4' U A 597 12.444 128.471 85.096 1.00 50.20 C
ATOM 8 O4' U A 597 11.085 128.826 85.458 1.00 51.69 O
ATOM 9 C3' U A 597 13.252 129.012 86.255 1.00 52.43 C
ATOM 10 O3' U A 597 14.618 129.156 85.902 1.00 55.21 O
ATOM 11 C2' U A 597 12.553 130.332 86.546 1.00 52.06 C
ATOM 12 O2' U A 597 12.877 131.348 85.616 1.00 53.31 O
ATOM 13 C1' U A 597 11.093 129.933 86.344 1.00 50.13 C
ATOM 14 N1 U A 597 10.423 129.541 87.591 1.00 48.39 N
ATOM 15 C2 U A 597 9.823 130.536 88.341 1.00 48.58 C
ATOM 16 O2 U A 597 9.793 131.706 87.998 1.00 48.34 O
ATOM 17 N3 U A 597 9.251 130.110 89.511 1.00 48.95 N
ATOM 18 C4 U A 597 9.211 128.819 89.996 1.00 50.64 C
ATOM 19 O4 U A 597 8.727 128.607 91.108 1.00 53.05 O
ATOM 20 C5 U A 597 9.825 127.846 89.151 1.00 49.82 C
ATOM 21 C6 U A 597 10.398 128.232 88.007 1.00 49.28 C
ATOM 22 P G A 598 15.751 128.989 87.029 1.00 54.71 P
ATOM 23 OP1 G A 598 17.057 128.933 86.299 1.00 53.25 O
ATOM 24 OP2 G A 598 15.357 127.861 87.918 1.00 53.13 O
ATOM 25 O5' G A 598 15.654 130.352 87.853 1.00 50.23 O
TER
ATOM 1 O3' G B 595 6.299 121.211 87.972 1.00 56.58 O
ATOM 2 P A B 596 7.798 121.676 88.312 1.00 59.25 P
ATOM 3 OP1 A B 596 8.676 120.513 88.014 1.00 57.74 O
ATOM 4 OP2 A B 596 7.852 122.332 89.649 1.00 57.92 O
ATOM 5 O5' A B 596 8.101 122.812 87.247 1.00 58.68 O
ATOM 6 C5' A B 596 8.367 122.487 85.884 1.00 55.67 C
ATOM 7 C4' A B 596 8.530 123.750 85.097 1.00 53.58 C
ATOM 8 O4' A B 596 7.286 124.497 85.171 1.00 53.18 O
ATOM 9 C3' A B 596 9.550 124.722 85.657 1.00 52.57 C
ATOM 10 O3' A B 596 10.884 124.371 85.309 1.00 52.28 O
ATOM 11 C2' A B 596 9.069 126.032 85.050 1.00 51.90 C
ATOM 12 O2' A B 596 9.325 126.108 83.660 1.00 53.23 O
ATOM 13 C1' A B 596 7.562 125.886 85.236 1.00 49.85 C
ATOM 14 N9 A B 596 7.103 126.384 86.535 1.00 47.80 N
ATOM 15 C8 A B 596 6.814 125.661 87.667 1.00 47.25 C
ATOM 16 N7 A B 596 6.425 126.398 88.678 1.00 45.80 N
ATOM 17 C5 A B 596 6.462 127.691 88.181 1.00 45.46 C
ATOM 18 C6 A B 596 6.171 128.933 88.763 1.00 47.03 C
ATOM 19 N6 A B 596 5.768 129.085 90.028 1.00 49.09 N
ATOM 20 N1 A B 596 6.313 130.032 87.997 1.00 45.79 N
ATOM 21 C2 A B 596 6.726 129.881 86.735 1.00 44.90 C
ATOM 22 N3 A B 596 7.032 128.774 86.078 1.00 44.70 N
ATOM 23 C4 A B 596 6.877 127.699 86.865 1.00 45.84 C
ATOM 24 P U B 597 12.097 124.770 86.292 1.00 51.55 P
ATOM 25 OP1 U B 597 13.326 124.186 85.706 1.00 51.33 O
ATOM 26 OP2 U B 597 11.736 124.471 87.699 1.00 49.33 O
ATOM 27 O5' U B 597 12.201 126.351 86.172 1.00 49.81 O
TER
ATOM 2 P U A 597 12.097 124.770 86.292 1.00 51.55 P
ATOM 3 OP1 U A 597 13.326 124.186 85.706 1.00 51.33 O
ATOM 4 OP2 U A 597 11.736 124.471 87.699 1.00 49.33 O
ATOM 5 O5' U A 597 12.201 126.351 86.172 1.00 49.81 O
ATOM 6 C5' U A 597 12.528 126.983 84.931 1.00 48.85 C
ATOM 7 C4' U A 597 12.444 128.471 85.096 1.00 50.20 C
ATOM 8 O4' U A 597 11.085 128.826 85.458 1.00 51.69 O
ATOM 9 C3' U A 597 13.252 129.012 86.255 1.00 52.43 C
ATOM 10 O3' U A 597 14.618 129.156 85.902 1.00 55.21 O
ATOM 11 C2' U A 597 12.553 130.332 86.546 1.00 52.06 C
ATOM 12 O2' U A 597 12.877 131.348 85.616 1.00 53.31 O
ATOM 13 C1' U A 597 11.093 129.933 86.344 1.00 50.13 C
ATOM 14 N1 U A 597 10.423 129.541 87.591 1.00 48.39 N
ATOM 15 C2 U A 597 9.823 130.536 88.341 1.00 48.58 C
ATOM 16 O2 U A 597 9.793 131.706 87.998 1.00 48.34 O
ATOM 17 N3 U A 597 9.251 130.110 89.511 1.00 48.95 N
ATOM 18 C4 U A 597 9.211 128.819 89.996 1.00 50.64 C
ATOM 19 O4 U A 597 8.727 128.607 91.108 1.00 53.05 O
ATOM 20 C5 U A 597 9.825 127.846 89.151 1.00 49.82 C
ATOM 21 C6 U A 597 10.398 128.232 88.007 1.00 49.28 C
ATOM 22 P G A 598 15.751 128.989 87.029 1.00 54.71 P
ATOM 23 OP1 G A 598 17.057 128.933 86.299 1.00 53.25 O
ATOM 24 OP2 G A 598 15.357 127.861 87.918 1.00 53.13 O
ATOM 25 O5' G A 598 15.654 130.352 87.853 1.00 50.23 O
TER
ATOM 1 O3' G B 595 6.299 121.211 87.972 1.00 56.58 O
ATOM 2 P A B 596 7.798 121.676 88.312 1.00 59.25 P
ATOM 3 OP1 A B 596 8.676 120.513 88.014 1.00 57.74 O
ATOM 4 OP2 A B 596 7.852 122.332 89.649 1.00 57.92 O
ATOM 5 O5' A B 596 8.101 122.812 87.247 1.00 58.68 O
ATOM 6 C5' A B 596 8.367 122.487 85.884 1.00 55.67 C
ATOM 7 C4' A B 596 8.530 123.750 85.097 1.00 53.58 C
ATOM 8 O4' A B 596 7.286 124.497 85.171 1.00 53.18 O
ATOM 9 C3' A B 596 9.550 124.722 85.657 1.00 52.57 C
ATOM 10 O3' A B 596 10.884 124.371 85.309 1.00 52.28 O
ATOM 11 C2' A B 596 9.069 126.032 85.050 1.00 51.90 C
ATOM 12 O2' A B 596 9.325 126.108 83.660 1.00 53.23 O
ATOM 13 C1' A B 596 7.562 125.886 85.236 1.00 49.85 C
ATOM 14 N9 A B 596 7.103 126.384 86.535 1.00 47.80 N
ATOM 15 C8 A B 596 6.814 125.661 87.667 1.00 47.25 C
ATOM 16 N7 A B 596 6.425 126.398 88.678 1.00 45.80 N
ATOM 17 C5 A B 596 6.462 127.691 88.181 1.00 45.46 C
ATOM 18 C6 A B 596 6.171 128.933 88.763 1.00 47.03 C
ATOM 19 N6 A B 596 5.768 129.085 90.028 1.00 49.09 N
ATOM 20 N1 A B 596 6.313 130.032 87.997 1.00 45.79 N
ATOM 21 C2 A B 596 6.726 129.881 86.735 1.00 44.90 C
ATOM 22 N3 A B 596 7.032 128.774 86.078 1.00 44.70 N
ATOM 23 C4 A B 596 6.877 127.699 86.865 1.00 45.84 C
ATOM 24 P U B 597 12.097 124.770 86.292 1.00 51.55 P
ATOM 25 OP1 U B 597 13.326 124.186 85.706 1.00 51.33 O
ATOM 26 OP2 U B 597 11.736 124.471 87.699 1.00 49.33 O
ATOM 27 O5' U B 597 12.201 126.351 86.172 1.00 49.81 O
TER
Atoms:
C4: (9.211,128.819,89.996)
N3: (9.251,130.110,89.511)
OP1: (13.326,124.186,85.706)
OP2: (11.736,124.471,87.699)
C2: (9.823,130.536,88.341)
C1': (11.093,129.933,86.344)
C3': (13.252,129.012,86.255)
O5': (12.201,126.351,86.172)
O4': (11.085,128.826,85.458)
C5': (12.528,126.983,84.931)
P: (12.097,124.770,86.292)
C4': (12.444,128.471,85.096)
C2': (12.553,130.332,86.546)
O2': (12.877,131.348,85.616)
N1: (10.423,129.541,87.591)
O4: (8.727,128.607,91.108)
O2: (9.793,131.706,87.998)
C6: (10.398,128.232,88.007)
C5: (9.825,127.846,89.151)
O3': (14.618,129.156,85.902)
N3: (9.251,130.110,89.511)
OP1: (13.326,124.186,85.706)
OP2: (11.736,124.471,87.699)
C2: (9.823,130.536,88.341)
C1': (11.093,129.933,86.344)
C3': (13.252,129.012,86.255)
O5': (12.201,126.351,86.172)
O4': (11.085,128.826,85.458)
C5': (12.528,126.983,84.931)
P: (12.097,124.770,86.292)
C4': (12.444,128.471,85.096)
C2': (12.553,130.332,86.546)
O2': (12.877,131.348,85.616)
N1: (10.423,129.541,87.591)
O4: (8.727,128.607,91.108)
O2: (9.793,131.706,87.998)
C6: (10.398,128.232,88.007)
C5: (9.825,127.846,89.151)
O3': (14.618,129.156,85.902)
OP1: (8.676,120.513,88.014)
OP2: (7.852,122.332,89.649)
C3': (9.550,124.722,85.657)
C1': (7.562,125.886,85.236)
C5': (8.367,122.487,85.884)
O4': (7.286,124.497,85.171)
C8: (6.814,125.661,87.667)
O2': (9.325,126.108,83.660)
C6: (6.171,128.933,88.763)
C5: (6.462,127.691,88.181)
C4: (6.877,127.699,86.865)
P: (7.798,121.676,88.312)
C4': (8.530,123.750,85.097)
C2': (9.069,126.032,85.050)
C2: (6.726,129.881,86.735)
N1: (6.313,130.032,87.997)
N3: (7.032,128.774,86.078)
N6: (5.768,129.085,90.028)
N7: (6.425,126.398,88.678)
N9: (7.103,126.384,86.535)
O5': (8.101,122.812,87.247)
O3': (10.884,124.371,85.309)
OP2: (7.852,122.332,89.649)
C3': (9.550,124.722,85.657)
C1': (7.562,125.886,85.236)
C5': (8.367,122.487,85.884)
O4': (7.286,124.497,85.171)
C8: (6.814,125.661,87.667)
O2': (9.325,126.108,83.660)
C6: (6.171,128.933,88.763)
C5: (6.462,127.691,88.181)
C4: (6.877,127.699,86.865)
P: (7.798,121.676,88.312)
C4': (8.530,123.750,85.097)
C2': (9.069,126.032,85.050)
C2: (6.726,129.881,86.735)
N1: (6.313,130.032,87.997)
N3: (7.032,128.774,86.078)
N6: (5.768,129.085,90.028)
N7: (6.425,126.398,88.678)
N9: (7.103,126.384,86.535)
O5': (8.101,122.812,87.247)
O3': (10.884,124.371,85.309)
Image (generated by PyMOL):