Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A1088:A1087
Extra
PDB:
ATOM 1 O3' U A1087 53.064 -97.641 118.988 1.00 98.88 O
ATOM 2 P C A1088 51.994 -98.107 120.096 1.00101.68 P
ATOM 3 OP1 C A1088 51.083 -96.954 120.316 1.00100.03 O
ATOM 4 OP2 C A1088 52.729 -98.703 121.245 1.00102.24 O
ATOM 5 O5' C A1088 51.155 -99.272 119.404 1.00 95.02 O
ATOM 6 C5' C A1088 51.652-100.606 119.294 1.00 87.97 C
ATOM 7 C4' C A1088 50.635-101.437 118.563 1.00 86.99 C
ATOM 8 O4' C A1088 50.009-100.554 117.608 1.00 91.23 O
ATOM 9 C3' C A1088 51.194-102.630 117.796 1.00 93.46 C
ATOM 10 O3' C A1088 51.071-103.809 118.625 1.00 94.02 O
ATOM 11 C2' C A1088 50.356-102.657 116.505 1.00 98.14 C
ATOM 12 O2' C A1088 49.297-103.596 116.429 1.00 92.57 O
ATOM 13 C1' C A1088 49.851-101.208 116.377 1.00 94.80 C
ATOM 14 N1 C A1088 50.492-100.385 115.326 1.00 97.05 N
ATOM 15 C2 C A1088 49.887-100.311 114.054 1.00100.58 C
ATOM 16 O2 C A1088 48.769-100.833 113.882 1.00 98.97 O
ATOM 17 N3 C A1088 50.532 -99.658 113.053 1.00 99.62 N
ATOM 18 C4 C A1088 51.712 -99.075 113.288 1.00 96.69 C
ATOM 19 N4 C A1088 52.342 -98.501 112.261 1.00 94.89 N
ATOM 20 C5 C A1088 52.308 -99.071 114.585 1.00 95.43 C
ATOM 21 C6 C A1088 51.673 -99.732 115.564 1.00 94.27 C
ATOM 22 P G A1089 51.357-105.290 118.025 1.00 86.18 P
ATOM 23 OP1 G A1089 50.088-105.873 117.492 1.00 91.71 O
ATOM 24 OP2 G A1089 52.125-106.043 119.057 1.00 82.41 O
ATOM 25 O5' G A1089 52.338-105.027 116.798 1.00 93.69 O
TER
ATOM 1 O3' A B1086 57.656 -95.446 122.516 1.00 79.45 O
ATOM 2 P U B1087 56.142 -95.931 122.727 1.00 69.81 P
ATOM 3 OP1 U B1087 55.300 -94.752 123.014 1.00 84.09 O
ATOM 4 OP2 U B1087 56.161 -97.059 123.682 1.00 68.40 O
ATOM 5 O5' U B1087 55.743 -96.513 121.298 1.00 72.57 O
ATOM 6 C5' U B1087 55.647 -95.674 120.140 1.00 80.88 C
ATOM 7 C4' U B1087 55.318 -96.517 118.937 1.00 87.82 C
ATOM 8 O4' U B1087 56.520 -97.065 118.334 1.00 83.70 O
ATOM 9 C3' U B1087 54.438 -97.701 119.308 1.00 94.96 C
ATOM 10 O3' U B1087 53.064 -97.641 118.988 1.00 98.88 O
ATOM 11 C2' U B1087 55.193 -98.950 118.884 1.00 97.91 C
ATOM 12 O2' U B1087 54.408 -99.914 118.214 1.00 99.36 O
ATOM 13 C1' U B1087 56.281 -98.415 117.955 1.00 95.86 C
ATOM 14 N1 U B1087 57.502 -99.221 118.170 1.00 97.26 N
ATOM 15 C2 U B1087 58.273 -99.603 117.070 1.00 94.59 C
ATOM 16 O2 U B1087 58.002 -99.293 115.913 1.00 96.99 O
ATOM 17 N3 U B1087 59.373-100.369 117.382 1.00 85.33 N
ATOM 18 C4 U B1087 59.768-100.792 118.646 1.00 82.65 C
ATOM 19 O4 U B1087 60.779-101.472 118.776 1.00 87.09 O
ATOM 20 C5 U B1087 58.933-100.372 119.707 1.00 85.79 C
ATOM 21 C6 U B1087 57.865 -99.622 119.451 1.00 93.86 C
ATOM 22 P C B1088 51.994 -98.107 120.096 1.00101.68 P
ATOM 23 OP1 C B1088 51.083 -96.954 120.316 1.00100.03 O
ATOM 24 OP2 C B1088 52.729 -98.703 121.245 1.00102.24 O
ATOM 25 O5' C B1088 51.155 -99.272 119.404 1.00 95.02 O
TER
ATOM 2 P C A1088 51.994 -98.107 120.096 1.00101.68 P
ATOM 3 OP1 C A1088 51.083 -96.954 120.316 1.00100.03 O
ATOM 4 OP2 C A1088 52.729 -98.703 121.245 1.00102.24 O
ATOM 5 O5' C A1088 51.155 -99.272 119.404 1.00 95.02 O
ATOM 6 C5' C A1088 51.652-100.606 119.294 1.00 87.97 C
ATOM 7 C4' C A1088 50.635-101.437 118.563 1.00 86.99 C
ATOM 8 O4' C A1088 50.009-100.554 117.608 1.00 91.23 O
ATOM 9 C3' C A1088 51.194-102.630 117.796 1.00 93.46 C
ATOM 10 O3' C A1088 51.071-103.809 118.625 1.00 94.02 O
ATOM 11 C2' C A1088 50.356-102.657 116.505 1.00 98.14 C
ATOM 12 O2' C A1088 49.297-103.596 116.429 1.00 92.57 O
ATOM 13 C1' C A1088 49.851-101.208 116.377 1.00 94.80 C
ATOM 14 N1 C A1088 50.492-100.385 115.326 1.00 97.05 N
ATOM 15 C2 C A1088 49.887-100.311 114.054 1.00100.58 C
ATOM 16 O2 C A1088 48.769-100.833 113.882 1.00 98.97 O
ATOM 17 N3 C A1088 50.532 -99.658 113.053 1.00 99.62 N
ATOM 18 C4 C A1088 51.712 -99.075 113.288 1.00 96.69 C
ATOM 19 N4 C A1088 52.342 -98.501 112.261 1.00 94.89 N
ATOM 20 C5 C A1088 52.308 -99.071 114.585 1.00 95.43 C
ATOM 21 C6 C A1088 51.673 -99.732 115.564 1.00 94.27 C
ATOM 22 P G A1089 51.357-105.290 118.025 1.00 86.18 P
ATOM 23 OP1 G A1089 50.088-105.873 117.492 1.00 91.71 O
ATOM 24 OP2 G A1089 52.125-106.043 119.057 1.00 82.41 O
ATOM 25 O5' G A1089 52.338-105.027 116.798 1.00 93.69 O
TER
ATOM 1 O3' A B1086 57.656 -95.446 122.516 1.00 79.45 O
ATOM 2 P U B1087 56.142 -95.931 122.727 1.00 69.81 P
ATOM 3 OP1 U B1087 55.300 -94.752 123.014 1.00 84.09 O
ATOM 4 OP2 U B1087 56.161 -97.059 123.682 1.00 68.40 O
ATOM 5 O5' U B1087 55.743 -96.513 121.298 1.00 72.57 O
ATOM 6 C5' U B1087 55.647 -95.674 120.140 1.00 80.88 C
ATOM 7 C4' U B1087 55.318 -96.517 118.937 1.00 87.82 C
ATOM 8 O4' U B1087 56.520 -97.065 118.334 1.00 83.70 O
ATOM 9 C3' U B1087 54.438 -97.701 119.308 1.00 94.96 C
ATOM 10 O3' U B1087 53.064 -97.641 118.988 1.00 98.88 O
ATOM 11 C2' U B1087 55.193 -98.950 118.884 1.00 97.91 C
ATOM 12 O2' U B1087 54.408 -99.914 118.214 1.00 99.36 O
ATOM 13 C1' U B1087 56.281 -98.415 117.955 1.00 95.86 C
ATOM 14 N1 U B1087 57.502 -99.221 118.170 1.00 97.26 N
ATOM 15 C2 U B1087 58.273 -99.603 117.070 1.00 94.59 C
ATOM 16 O2 U B1087 58.002 -99.293 115.913 1.00 96.99 O
ATOM 17 N3 U B1087 59.373-100.369 117.382 1.00 85.33 N
ATOM 18 C4 U B1087 59.768-100.792 118.646 1.00 82.65 C
ATOM 19 O4 U B1087 60.779-101.472 118.776 1.00 87.09 O
ATOM 20 C5 U B1087 58.933-100.372 119.707 1.00 85.79 C
ATOM 21 C6 U B1087 57.865 -99.622 119.451 1.00 93.86 C
ATOM 22 P C B1088 51.994 -98.107 120.096 1.00101.68 P
ATOM 23 OP1 C B1088 51.083 -96.954 120.316 1.00100.03 O
ATOM 24 OP2 C B1088 52.729 -98.703 121.245 1.00102.24 O
ATOM 25 O5' C B1088 51.155 -99.272 119.404 1.00 95.02 O
TER
Atoms:
C2: (49.887,-100.311,114.054)
OP1: (51.083,-96.954,120.316)
OP2: (52.729,-98.703,121.245)
C4: (51.712,-99.075,113.288)
O5': (51.155,-99.272,119.404)
C3': (51.194,-102.630,117.796)
C1': (49.851,-101.208,116.377)
O4': (50.009,-100.554,117.608)
C5': (51.652,-100.606,119.294)
P: (51.994,-98.107,120.096)
O2: (48.769,-100.833,113.882)
C4': (50.635,-101.437,118.563)
C2': (50.356,-102.657,116.505)
O2': (49.297,-103.596,116.429)
N1: (50.492,-100.385,115.326)
N3: (50.532,-99.658,113.053)
N4: (52.342,-98.501,112.261)
C6: (51.673,-99.732,115.564)
C5: (52.308,-99.071,114.585)
O3': (51.071,-103.809,118.625)
OP1: (51.083,-96.954,120.316)
OP2: (52.729,-98.703,121.245)
C4: (51.712,-99.075,113.288)
O5': (51.155,-99.272,119.404)
C3': (51.194,-102.630,117.796)
C1': (49.851,-101.208,116.377)
O4': (50.009,-100.554,117.608)
C5': (51.652,-100.606,119.294)
P: (51.994,-98.107,120.096)
O2: (48.769,-100.833,113.882)
C4': (50.635,-101.437,118.563)
C2': (50.356,-102.657,116.505)
O2': (49.297,-103.596,116.429)
N1: (50.492,-100.385,115.326)
N3: (50.532,-99.658,113.053)
N4: (52.342,-98.501,112.261)
C6: (51.673,-99.732,115.564)
C5: (52.308,-99.071,114.585)
O3': (51.071,-103.809,118.625)
C4: (59.768,-100.792,118.646)
N3: (59.373,-100.369,117.382)
OP1: (55.300,-94.752,123.014)
OP2: (56.161,-97.059,123.682)
C2: (58.273,-99.603,117.070)
C1': (56.281,-98.415,117.955)
C3': (54.438,-97.701,119.308)
O5': (55.743,-96.513,121.298)
O4': (56.520,-97.065,118.334)
C5': (55.647,-95.674,120.140)
P: (56.142,-95.931,122.727)
C4': (55.318,-96.517,118.937)
C2': (55.193,-98.950,118.884)
O2': (54.408,-99.914,118.214)
N1: (57.502,-99.221,118.170)
O4: (60.779,-101.472,118.776)
O2: (58.002,-99.293,115.913)
C6: (57.865,-99.622,119.451)
C5: (58.933,-100.372,119.707)
O3': (53.064,-97.641,118.988)
N3: (59.373,-100.369,117.382)
OP1: (55.300,-94.752,123.014)
OP2: (56.161,-97.059,123.682)
C2: (58.273,-99.603,117.070)
C1': (56.281,-98.415,117.955)
C3': (54.438,-97.701,119.308)
O5': (55.743,-96.513,121.298)
O4': (56.520,-97.065,118.334)
C5': (55.647,-95.674,120.140)
P: (56.142,-95.931,122.727)
C4': (55.318,-96.517,118.937)
C2': (55.193,-98.950,118.884)
O2': (54.408,-99.914,118.214)
N1: (57.502,-99.221,118.170)
O4: (60.779,-101.472,118.776)
O2: (58.002,-99.293,115.913)
C6: (57.865,-99.622,119.451)
C5: (58.933,-100.372,119.707)
O3': (53.064,-97.641,118.988)
Image (generated by PyMOL):