Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01197:01196
Extra
PDB:
ATOM 1 O3' U A1196 39.669 111.450 126.302 1.00 39.19 O
ATOM 2 P C A1197 39.733 109.932 125.803 1.00 39.13 P
ATOM 3 OP1 C A1197 39.798 109.108 127.030 1.00 39.85 O
ATOM 4 OP2 C A1197 40.778 109.775 124.758 1.00 42.09 O
ATOM 5 O5' C A1197 38.295 109.729 125.154 1.00 40.52 O
ATOM 6 C5' C A1197 38.114 109.161 123.848 1.00 37.42 C
ATOM 7 C4' C A1197 36.951 108.205 123.879 1.00 37.10 C
ATOM 8 O4' C A1197 36.171 108.433 125.080 1.00 38.43 O
ATOM 9 C3' C A1197 35.959 108.347 122.743 1.00 37.20 C
ATOM 10 O3' C A1197 36.397 107.613 121.601 1.00 37.52 O
ATOM 11 C2' C A1197 34.687 107.752 123.349 1.00 36.75 C
ATOM 12 O2' C A1197 34.654 106.336 123.319 1.00 35.90 O
ATOM 13 C1' C A1197 34.801 108.200 124.810 1.00 36.41 C
ATOM 14 N1 C A1197 34.029 109.410 125.155 1.00 35.17 N
ATOM 15 C2 C A1197 32.664 109.280 125.390 1.00 34.38 C
ATOM 16 O2 C A1197 32.157 108.161 125.325 1.00 36.89 O
ATOM 17 N3 C A1197 31.930 110.373 125.685 1.00 35.42 N
ATOM 18 C4 C A1197 32.519 111.567 125.761 1.00 36.20 C
ATOM 19 N4 C A1197 31.753 112.623 126.049 1.00 38.35 N
ATOM 20 C5 C A1197 33.918 111.732 125.543 1.00 33.54 C
ATOM 21 C6 C A1197 34.628 110.638 125.243 1.00 34.22 C
ATOM 22 P G A1198 36.948 108.382 120.299 1.00 35.02 P
ATOM 23 OP1 G A1198 36.752 107.443 119.166 1.00 37.36 O
ATOM 24 OP2 G A1198 38.307 108.900 120.601 1.00 35.81 O
ATOM 25 O5' G A1198 35.979 109.626 120.093 1.00 33.16 O
TER
ATOM 1 O3' A B1195 44.107 115.944 125.879 1.00 31.03 O
ATOM 2 P U B1196 43.897 115.069 124.550 1.00 35.56 P
ATOM 3 OP1 U B1196 44.953 114.021 124.560 1.00 33.21 O
ATOM 4 OP2 U B1196 43.757 115.980 123.377 1.00 33.67 O
ATOM 5 O5' U B1196 42.499 114.350 124.769 1.00 33.37 O
ATOM 6 C5' U B1196 42.264 113.646 125.973 1.00 36.19 C
ATOM 7 C4' U B1196 40.793 113.508 126.230 1.00 37.53 C
ATOM 8 O4' U B1196 40.074 114.754 126.137 1.00 36.72 O
ATOM 9 C3' U B1196 39.992 112.504 125.410 1.00 37.07 C
ATOM 10 O3' U B1196 39.669 111.450 126.302 1.00 39.19 O
ATOM 11 C2' U B1196 38.762 113.312 124.968 1.00 36.35 C
ATOM 12 O2' U B1196 37.558 112.584 124.970 1.00 35.38 O
ATOM 13 C1' U B1196 38.718 114.425 126.008 1.00 37.00 C
ATOM 14 N1 U B1196 37.976 115.618 125.584 1.00 39.12 N
ATOM 15 C2 U B1196 36.780 115.895 126.234 1.00 40.54 C
ATOM 16 O2 U B1196 36.345 115.215 127.154 1.00 40.39 O
ATOM 17 N3 U B1196 36.114 116.999 125.763 1.00 39.55 N
ATOM 18 C4 U B1196 36.510 117.829 124.736 1.00 38.91 C
ATOM 19 O4 U B1196 35.746 118.711 124.347 1.00 40.99 O
ATOM 20 C5 U B1196 37.762 117.491 124.142 1.00 37.78 C
ATOM 21 C6 U B1196 38.436 116.427 124.574 1.00 37.73 C
ATOM 22 P C B1197 39.733 109.932 125.803 1.00 39.13 P
ATOM 23 OP1 C B1197 39.798 109.108 127.030 1.00 39.85 O
ATOM 24 OP2 C B1197 40.778 109.775 124.758 1.00 42.09 O
ATOM 25 O5' C B1197 38.295 109.729 125.154 1.00 40.52 O
TER
ATOM 2 P C A1197 39.733 109.932 125.803 1.00 39.13 P
ATOM 3 OP1 C A1197 39.798 109.108 127.030 1.00 39.85 O
ATOM 4 OP2 C A1197 40.778 109.775 124.758 1.00 42.09 O
ATOM 5 O5' C A1197 38.295 109.729 125.154 1.00 40.52 O
ATOM 6 C5' C A1197 38.114 109.161 123.848 1.00 37.42 C
ATOM 7 C4' C A1197 36.951 108.205 123.879 1.00 37.10 C
ATOM 8 O4' C A1197 36.171 108.433 125.080 1.00 38.43 O
ATOM 9 C3' C A1197 35.959 108.347 122.743 1.00 37.20 C
ATOM 10 O3' C A1197 36.397 107.613 121.601 1.00 37.52 O
ATOM 11 C2' C A1197 34.687 107.752 123.349 1.00 36.75 C
ATOM 12 O2' C A1197 34.654 106.336 123.319 1.00 35.90 O
ATOM 13 C1' C A1197 34.801 108.200 124.810 1.00 36.41 C
ATOM 14 N1 C A1197 34.029 109.410 125.155 1.00 35.17 N
ATOM 15 C2 C A1197 32.664 109.280 125.390 1.00 34.38 C
ATOM 16 O2 C A1197 32.157 108.161 125.325 1.00 36.89 O
ATOM 17 N3 C A1197 31.930 110.373 125.685 1.00 35.42 N
ATOM 18 C4 C A1197 32.519 111.567 125.761 1.00 36.20 C
ATOM 19 N4 C A1197 31.753 112.623 126.049 1.00 38.35 N
ATOM 20 C5 C A1197 33.918 111.732 125.543 1.00 33.54 C
ATOM 21 C6 C A1197 34.628 110.638 125.243 1.00 34.22 C
ATOM 22 P G A1198 36.948 108.382 120.299 1.00 35.02 P
ATOM 23 OP1 G A1198 36.752 107.443 119.166 1.00 37.36 O
ATOM 24 OP2 G A1198 38.307 108.900 120.601 1.00 35.81 O
ATOM 25 O5' G A1198 35.979 109.626 120.093 1.00 33.16 O
TER
ATOM 1 O3' A B1195 44.107 115.944 125.879 1.00 31.03 O
ATOM 2 P U B1196 43.897 115.069 124.550 1.00 35.56 P
ATOM 3 OP1 U B1196 44.953 114.021 124.560 1.00 33.21 O
ATOM 4 OP2 U B1196 43.757 115.980 123.377 1.00 33.67 O
ATOM 5 O5' U B1196 42.499 114.350 124.769 1.00 33.37 O
ATOM 6 C5' U B1196 42.264 113.646 125.973 1.00 36.19 C
ATOM 7 C4' U B1196 40.793 113.508 126.230 1.00 37.53 C
ATOM 8 O4' U B1196 40.074 114.754 126.137 1.00 36.72 O
ATOM 9 C3' U B1196 39.992 112.504 125.410 1.00 37.07 C
ATOM 10 O3' U B1196 39.669 111.450 126.302 1.00 39.19 O
ATOM 11 C2' U B1196 38.762 113.312 124.968 1.00 36.35 C
ATOM 12 O2' U B1196 37.558 112.584 124.970 1.00 35.38 O
ATOM 13 C1' U B1196 38.718 114.425 126.008 1.00 37.00 C
ATOM 14 N1 U B1196 37.976 115.618 125.584 1.00 39.12 N
ATOM 15 C2 U B1196 36.780 115.895 126.234 1.00 40.54 C
ATOM 16 O2 U B1196 36.345 115.215 127.154 1.00 40.39 O
ATOM 17 N3 U B1196 36.114 116.999 125.763 1.00 39.55 N
ATOM 18 C4 U B1196 36.510 117.829 124.736 1.00 38.91 C
ATOM 19 O4 U B1196 35.746 118.711 124.347 1.00 40.99 O
ATOM 20 C5 U B1196 37.762 117.491 124.142 1.00 37.78 C
ATOM 21 C6 U B1196 38.436 116.427 124.574 1.00 37.73 C
ATOM 22 P C B1197 39.733 109.932 125.803 1.00 39.13 P
ATOM 23 OP1 C B1197 39.798 109.108 127.030 1.00 39.85 O
ATOM 24 OP2 C B1197 40.778 109.775 124.758 1.00 42.09 O
ATOM 25 O5' C B1197 38.295 109.729 125.154 1.00 40.52 O
TER
Atoms:
C2: (32.664,109.280,125.390)
OP1: (39.798,109.108,127.030)
OP2: (40.778,109.775,124.758)
C4: (32.519,111.567,125.761)
O5': (38.295,109.729,125.154)
C3': (35.959,108.347,122.743)
C1': (34.801,108.200,124.810)
O4': (36.171,108.433,125.080)
C5': (38.114,109.161,123.848)
P: (39.733,109.932,125.803)
O2: (32.157,108.161,125.325)
C4': (36.951,108.205,123.879)
C2': (34.687,107.752,123.349)
O2': (34.654,106.336,123.319)
N1: (34.029,109.410,125.155)
N3: (31.930,110.373,125.685)
N4: (31.753,112.623,126.049)
C6: (34.628,110.638,125.243)
C5: (33.918,111.732,125.543)
O3': (36.397,107.613,121.601)
OP1: (39.798,109.108,127.030)
OP2: (40.778,109.775,124.758)
C4: (32.519,111.567,125.761)
O5': (38.295,109.729,125.154)
C3': (35.959,108.347,122.743)
C1': (34.801,108.200,124.810)
O4': (36.171,108.433,125.080)
C5': (38.114,109.161,123.848)
P: (39.733,109.932,125.803)
O2: (32.157,108.161,125.325)
C4': (36.951,108.205,123.879)
C2': (34.687,107.752,123.349)
O2': (34.654,106.336,123.319)
N1: (34.029,109.410,125.155)
N3: (31.930,110.373,125.685)
N4: (31.753,112.623,126.049)
C6: (34.628,110.638,125.243)
C5: (33.918,111.732,125.543)
O3': (36.397,107.613,121.601)
C4: (36.510,117.829,124.736)
N3: (36.114,116.999,125.763)
OP1: (44.953,114.021,124.560)
OP2: (43.757,115.980,123.377)
C2: (36.780,115.895,126.234)
C1': (38.718,114.425,126.008)
C3': (39.992,112.504,125.410)
O5': (42.499,114.350,124.769)
O4': (40.074,114.754,126.137)
C5': (42.264,113.646,125.973)
P: (43.897,115.069,124.550)
C4': (40.793,113.508,126.230)
C2': (38.762,113.312,124.968)
O2': (37.558,112.584,124.970)
N1: (37.976,115.618,125.584)
O4: (35.746,118.711,124.347)
O2: (36.345,115.215,127.154)
C6: (38.436,116.427,124.574)
C5: (37.762,117.491,124.142)
O3': (39.669,111.450,126.302)
N3: (36.114,116.999,125.763)
OP1: (44.953,114.021,124.560)
OP2: (43.757,115.980,123.377)
C2: (36.780,115.895,126.234)
C1': (38.718,114.425,126.008)
C3': (39.992,112.504,125.410)
O5': (42.499,114.350,124.769)
O4': (40.074,114.754,126.137)
C5': (42.264,113.646,125.973)
P: (43.897,115.069,124.550)
C4': (40.793,113.508,126.230)
C2': (38.762,113.312,124.968)
O2': (37.558,112.584,124.970)
N1: (37.976,115.618,125.584)
O4: (35.746,118.711,124.347)
O2: (36.345,115.215,127.154)
C6: (38.436,116.427,124.574)
C5: (37.762,117.491,124.142)
O3': (39.669,111.450,126.302)
Image (generated by PyMOL):