Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1477:A1476
Extra
PDB:
ATOM 1 O3' U A1476 -61.583 1.295 -35.281 1.00 13.53 O
ATOM 2 P C A1477 -63.138 1.039 -34.977 1.00 4.22 P
ATOM 3 OP1 C A1477 -63.849 2.336 -35.179 1.00 4.22 O
ATOM 4 OP2 C A1477 -63.217 0.366 -33.638 1.00 4.22 O
ATOM 5 O5' C A1477 -63.562 0.024 -36.126 1.00 4.22 O
ATOM 6 C5' C A1477 -64.277 0.483 -37.249 1.00 4.22 C
ATOM 7 C4' C A1477 -64.601 -0.639 -38.189 1.00 4.22 C
ATOM 8 O4' C A1477 -63.495 -1.582 -38.234 1.00 4.22 O
ATOM 9 C3' C A1477 -65.774 -1.503 -37.801 1.00 4.22 C
ATOM 10 O3' C A1477 -67.013 -0.921 -38.074 1.00 4.22 O
ATOM 11 C2' C A1477 -65.514 -2.761 -38.586 1.00 4.22 C
ATOM 12 O2' C A1477 -65.789 -2.556 -39.964 1.00 4.22 O
ATOM 13 C1' C A1477 -64.005 -2.895 -38.386 1.00 4.22 C
ATOM 14 N1 C A1477 -63.691 -3.674 -37.156 1.00 4.22 N
ATOM 15 C2 C A1477 -64.027 -5.020 -37.112 1.00 4.22 C
ATOM 16 O2 C A1477 -64.543 -5.514 -38.115 1.00 4.22 O
ATOM 17 N3 C A1477 -63.782 -5.760 -36.012 1.00 4.22 N
ATOM 18 C4 C A1477 -63.217 -5.203 -34.952 1.00 4.22 C
ATOM 19 N4 C A1477 -62.980 -5.970 -33.883 1.00 4.22 N
ATOM 20 C5 C A1477 -62.883 -3.820 -34.948 1.00 4.22 C
ATOM 21 C6 C A1477 -63.148 -3.106 -36.051 1.00 4.22 C
ATOM 22 P A A1478 -68.073 -0.807 -36.882 1.00 15.61 P
ATOM 23 OP1 A A1478 -69.078 0.229 -37.278 1.00 15.61 O
ATOM 24 OP2 A A1478 -67.283 -0.617 -35.628 1.00 15.61 O
ATOM 25 O5' A A1478 -68.751 -2.241 -36.870 1.00 15.61 O
TER
ATOM 1 O3' U B1475 -56.467 0.804 -31.969 1.00 10.04 O
ATOM 2 P U B1476 -57.998 0.941 -31.517 1.00 13.53 P
ATOM 3 OP1 U B1476 -58.223 2.374 -31.153 1.00 13.53 O
ATOM 4 OP2 U B1476 -58.252 -0.114 -30.498 1.00 13.53 O
ATOM 5 O5' U B1476 -58.773 0.592 -32.855 1.00 13.53 O
ATOM 6 C5' U B1476 -58.614 1.382 -34.010 1.00 13.53 C
ATOM 7 C4' U B1476 -59.201 0.692 -35.199 1.00 13.53 C
ATOM 8 O4' U B1476 -58.493 -0.552 -35.427 1.00 13.53 O
ATOM 9 C3' U B1476 -60.653 0.258 -35.058 1.00 13.53 C
ATOM 10 O3' U B1476 -61.583 1.295 -35.281 1.00 13.53 O
ATOM 11 C2' U B1476 -60.761 -0.875 -36.059 1.00 13.53 C
ATOM 12 O2' U B1476 -60.905 -0.382 -37.379 1.00 13.53 O
ATOM 13 C1' U B1476 -59.392 -1.527 -35.924 1.00 13.53 C
ATOM 14 N1 U B1476 -59.424 -2.689 -34.993 1.00 13.32 N
ATOM 15 C2 U B1476 -59.560 -3.916 -35.614 1.00 13.32 C
ATOM 16 O2 U B1476 -59.646 -4.068 -36.820 1.00 13.32 O
ATOM 17 N3 U B1476 -59.584 -4.993 -34.803 1.00 13.32 N
ATOM 18 C4 U B1476 -59.499 -4.992 -33.446 1.00 13.32 C
ATOM 19 O4 U B1476 -59.554 -6.109 -32.910 1.00 13.32 O
ATOM 20 C5 U B1476 -59.365 -3.687 -32.847 1.00 13.32 C
ATOM 21 C6 U B1476 -59.331 -2.601 -33.626 1.00 13.32 C
ATOM 22 P C B1477 -63.138 1.039 -34.977 1.00 4.22 P
ATOM 23 OP1 C B1477 -63.849 2.336 -35.179 1.00 4.22 O
ATOM 24 OP2 C B1477 -63.217 0.366 -33.638 1.00 4.22 O
ATOM 25 O5' C B1477 -63.562 0.024 -36.126 1.00 4.22 O
TER
ATOM 2 P C A1477 -63.138 1.039 -34.977 1.00 4.22 P
ATOM 3 OP1 C A1477 -63.849 2.336 -35.179 1.00 4.22 O
ATOM 4 OP2 C A1477 -63.217 0.366 -33.638 1.00 4.22 O
ATOM 5 O5' C A1477 -63.562 0.024 -36.126 1.00 4.22 O
ATOM 6 C5' C A1477 -64.277 0.483 -37.249 1.00 4.22 C
ATOM 7 C4' C A1477 -64.601 -0.639 -38.189 1.00 4.22 C
ATOM 8 O4' C A1477 -63.495 -1.582 -38.234 1.00 4.22 O
ATOM 9 C3' C A1477 -65.774 -1.503 -37.801 1.00 4.22 C
ATOM 10 O3' C A1477 -67.013 -0.921 -38.074 1.00 4.22 O
ATOM 11 C2' C A1477 -65.514 -2.761 -38.586 1.00 4.22 C
ATOM 12 O2' C A1477 -65.789 -2.556 -39.964 1.00 4.22 O
ATOM 13 C1' C A1477 -64.005 -2.895 -38.386 1.00 4.22 C
ATOM 14 N1 C A1477 -63.691 -3.674 -37.156 1.00 4.22 N
ATOM 15 C2 C A1477 -64.027 -5.020 -37.112 1.00 4.22 C
ATOM 16 O2 C A1477 -64.543 -5.514 -38.115 1.00 4.22 O
ATOM 17 N3 C A1477 -63.782 -5.760 -36.012 1.00 4.22 N
ATOM 18 C4 C A1477 -63.217 -5.203 -34.952 1.00 4.22 C
ATOM 19 N4 C A1477 -62.980 -5.970 -33.883 1.00 4.22 N
ATOM 20 C5 C A1477 -62.883 -3.820 -34.948 1.00 4.22 C
ATOM 21 C6 C A1477 -63.148 -3.106 -36.051 1.00 4.22 C
ATOM 22 P A A1478 -68.073 -0.807 -36.882 1.00 15.61 P
ATOM 23 OP1 A A1478 -69.078 0.229 -37.278 1.00 15.61 O
ATOM 24 OP2 A A1478 -67.283 -0.617 -35.628 1.00 15.61 O
ATOM 25 O5' A A1478 -68.751 -2.241 -36.870 1.00 15.61 O
TER
ATOM 1 O3' U B1475 -56.467 0.804 -31.969 1.00 10.04 O
ATOM 2 P U B1476 -57.998 0.941 -31.517 1.00 13.53 P
ATOM 3 OP1 U B1476 -58.223 2.374 -31.153 1.00 13.53 O
ATOM 4 OP2 U B1476 -58.252 -0.114 -30.498 1.00 13.53 O
ATOM 5 O5' U B1476 -58.773 0.592 -32.855 1.00 13.53 O
ATOM 6 C5' U B1476 -58.614 1.382 -34.010 1.00 13.53 C
ATOM 7 C4' U B1476 -59.201 0.692 -35.199 1.00 13.53 C
ATOM 8 O4' U B1476 -58.493 -0.552 -35.427 1.00 13.53 O
ATOM 9 C3' U B1476 -60.653 0.258 -35.058 1.00 13.53 C
ATOM 10 O3' U B1476 -61.583 1.295 -35.281 1.00 13.53 O
ATOM 11 C2' U B1476 -60.761 -0.875 -36.059 1.00 13.53 C
ATOM 12 O2' U B1476 -60.905 -0.382 -37.379 1.00 13.53 O
ATOM 13 C1' U B1476 -59.392 -1.527 -35.924 1.00 13.53 C
ATOM 14 N1 U B1476 -59.424 -2.689 -34.993 1.00 13.32 N
ATOM 15 C2 U B1476 -59.560 -3.916 -35.614 1.00 13.32 C
ATOM 16 O2 U B1476 -59.646 -4.068 -36.820 1.00 13.32 O
ATOM 17 N3 U B1476 -59.584 -4.993 -34.803 1.00 13.32 N
ATOM 18 C4 U B1476 -59.499 -4.992 -33.446 1.00 13.32 C
ATOM 19 O4 U B1476 -59.554 -6.109 -32.910 1.00 13.32 O
ATOM 20 C5 U B1476 -59.365 -3.687 -32.847 1.00 13.32 C
ATOM 21 C6 U B1476 -59.331 -2.601 -33.626 1.00 13.32 C
ATOM 22 P C B1477 -63.138 1.039 -34.977 1.00 4.22 P
ATOM 23 OP1 C B1477 -63.849 2.336 -35.179 1.00 4.22 O
ATOM 24 OP2 C B1477 -63.217 0.366 -33.638 1.00 4.22 O
ATOM 25 O5' C B1477 -63.562 0.024 -36.126 1.00 4.22 O
TER
Atoms:
C2: (-64.027,-5.020,-37.112)
OP1: (-63.849,2.336,-35.179)
OP2: (-63.217,0.366,-33.638)
C4: (-63.217,-5.203,-34.952)
O5': (-63.562,0.024,-36.126)
C3': (-65.774,-1.503,-37.801)
C1': (-64.005,-2.895,-38.386)
O4': (-63.495,-1.582,-38.234)
C5': (-64.277,0.483,-37.249)
P: (-63.138,1.039,-34.977)
O2: (-64.543,-5.514,-38.115)
C4': (-64.601,-0.639,-38.189)
C2': (-65.514,-2.761,-38.586)
O2': (-65.789,-2.556,-39.964)
N1: (-63.691,-3.674,-37.156)
N3: (-63.782,-5.760,-36.012)
N4: (-62.980,-5.970,-33.883)
C6: (-63.148,-3.106,-36.051)
C5: (-62.883,-3.820,-34.948)
O3': (-67.013,-0.921,-38.074)
OP1: (-63.849,2.336,-35.179)
OP2: (-63.217,0.366,-33.638)
C4: (-63.217,-5.203,-34.952)
O5': (-63.562,0.024,-36.126)
C3': (-65.774,-1.503,-37.801)
C1': (-64.005,-2.895,-38.386)
O4': (-63.495,-1.582,-38.234)
C5': (-64.277,0.483,-37.249)
P: (-63.138,1.039,-34.977)
O2: (-64.543,-5.514,-38.115)
C4': (-64.601,-0.639,-38.189)
C2': (-65.514,-2.761,-38.586)
O2': (-65.789,-2.556,-39.964)
N1: (-63.691,-3.674,-37.156)
N3: (-63.782,-5.760,-36.012)
N4: (-62.980,-5.970,-33.883)
C6: (-63.148,-3.106,-36.051)
C5: (-62.883,-3.820,-34.948)
O3': (-67.013,-0.921,-38.074)
C4: (-59.499,-4.992,-33.446)
N3: (-59.584,-4.993,-34.803)
OP1: (-58.223,2.374,-31.153)
OP2: (-58.252,-0.114,-30.498)
C2: (-59.560,-3.916,-35.614)
C1': (-59.392,-1.527,-35.924)
C3': (-60.653,0.258,-35.058)
O5': (-58.773,0.592,-32.855)
O4': (-58.493,-0.552,-35.427)
C5': (-58.614,1.382,-34.010)
P: (-57.998,0.941,-31.517)
C4': (-59.201,0.692,-35.199)
C2': (-60.761,-0.875,-36.059)
O2': (-60.905,-0.382,-37.379)
N1: (-59.424,-2.689,-34.993)
O4: (-59.554,-6.109,-32.910)
O2: (-59.646,-4.068,-36.820)
C6: (-59.331,-2.601,-33.626)
C5: (-59.365,-3.687,-32.847)
O3': (-61.583,1.295,-35.281)
N3: (-59.584,-4.993,-34.803)
OP1: (-58.223,2.374,-31.153)
OP2: (-58.252,-0.114,-30.498)
C2: (-59.560,-3.916,-35.614)
C1': (-59.392,-1.527,-35.924)
C3': (-60.653,0.258,-35.058)
O5': (-58.773,0.592,-32.855)
O4': (-58.493,-0.552,-35.427)
C5': (-58.614,1.382,-34.010)
P: (-57.998,0.941,-31.517)
C4': (-59.201,0.692,-35.199)
C2': (-60.761,-0.875,-36.059)
O2': (-60.905,-0.382,-37.379)
N1: (-59.424,-2.689,-34.993)
O4: (-59.554,-6.109,-32.910)
O2: (-59.646,-4.068,-36.820)
C6: (-59.331,-2.601,-33.626)
C5: (-59.365,-3.687,-32.847)
O3': (-61.583,1.295,-35.281)
Image (generated by PyMOL):