ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3S49:F3:F2

Extra

PDB:
ATOM 1 O3' A A 2 -3.364 19.795 51.151 1.00 37.24 O
ATOM 2 P U A 3 -2.666 19.771 49.715 1.00 36.21 P
ATOM 3 OP1 U A 3 -3.731 20.117 48.753 1.00 35.43 O
ATOM 4 OP2 U A 3 -1.902 18.513 49.548 1.00 38.02 O
ATOM 5 O5' U A 3 -1.572 20.931 49.801 1.00 34.94 O
ATOM 6 C5' U A 3 -1.941 22.300 49.821 1.00 33.31 C
ATOM 7 C4' U A 3 -0.734 23.175 50.079 1.00 32.93 C
ATOM 8 O4' U A 3 -0.080 22.717 51.289 1.00 34.07 O
ATOM 9 C3' U A 3 0.375 23.132 49.036 1.00 32.09 C
ATOM 10 O3' U A 3 0.099 23.945 47.905 1.00 33.69 O
ATOM 11 C2' U A 3 1.512 23.708 49.859 1.00 32.51 C
ATOM 12 O2' U A 3 1.385 25.099 50.066 1.00 31.13 O
ATOM 13 C1' U A 3 1.311 22.945 51.169 1.00 33.59 C
ATOM 14 N1 U A 3 2.087 21.655 51.231 1.00 33.41 N
ATOM 15 C2 U A 3 3.422 21.743 51.586 1.00 34.37 C
ATOM 16 O2 U A 3 3.992 22.797 51.847 1.00 35.02 O
ATOM 17 N3 U A 3 4.073 20.541 51.636 1.00 33.81 N
ATOM 18 C4 U A 3 3.552 19.290 51.353 1.00 34.92 C
ATOM 19 O4 U A 3 4.295 18.315 51.440 1.00 35.88 O
ATOM 20 C5 U A 3 2.156 19.264 50.981 1.00 32.98 C
ATOM 21 C6 U A 3 1.495 20.430 50.938 1.00 33.53 C
ATOM 22 P A A 4 0.730 23.606 46.472 1.00 32.43 P
ATOM 23 OP1 A A 4 -0.024 24.381 45.473 1.00 32.09 O
ATOM 24 OP2 A A 4 0.862 22.140 46.334 1.00 32.48 O
ATOM 25 O5' A A 4 2.219 24.166 46.604 1.00 33.07 O
TER

ATOM 1 O3' U B 1 -3.032 14.443 54.087 1.00 48.63 O
ATOM 2 P A B 2 -2.665 14.947 52.615 1.00 46.94 P
ATOM 3 OP1 A B 2 -3.764 14.578 51.708 1.00 48.35 O
ATOM 4 OP2 A B 2 -1.287 14.517 52.290 1.00 46.16 O
ATOM 5 O5' A B 2 -2.653 16.538 52.794 1.00 44.70 O
ATOM 6 C5' A B 2 -3.839 17.279 53.072 1.00 43.16 C
ATOM 7 C4' A B 2 -3.490 18.730 53.347 1.00 40.15 C
ATOM 8 O4' A B 2 -2.652 18.809 54.525 1.00 40.61 O
ATOM 9 C3' A B 2 -2.627 19.414 52.299 1.00 38.15 C
ATOM 10 O3' A B 2 -3.364 19.795 51.151 1.00 37.24 O
ATOM 11 C2' A B 2 -2.111 20.602 53.102 1.00 36.58 C
ATOM 12 O2' A B 2 -3.094 21.574 53.379 1.00 35.79 O
ATOM 13 C1' A B 2 -1.729 19.875 54.385 1.00 38.36 C
ATOM 14 N9 A B 2 -0.352 19.367 54.344 1.00 37.72 N
ATOM 15 C8 A B 2 0.062 18.102 54.026 1.00 37.34 C
ATOM 16 N7 A B 2 1.363 17.955 54.068 1.00 38.16 N
ATOM 17 C5 A B 2 1.838 19.204 54.446 1.00 36.79 C
ATOM 18 C6 A B 2 3.139 19.715 54.669 1.00 36.52 C
ATOM 19 N6 A B 2 4.255 18.983 54.548 1.00 37.48 N
ATOM 20 N1 A B 2 3.255 21.017 55.017 1.00 35.62 N
ATOM 21 C2 A B 2 2.146 21.759 55.136 1.00 35.51 C
ATOM 22 N3 A B 2 0.877 21.392 54.967 1.00 35.23 N
ATOM 23 C4 A B 2 0.790 20.091 54.616 1.00 36.18 C
ATOM 24 P U B 3 -2.666 19.771 49.715 1.00 36.21 P
ATOM 25 OP1 U B 3 -3.731 20.117 48.753 1.00 35.43 O
ATOM 26 OP2 U B 3 -1.902 18.513 49.548 1.00 38.02 O
ATOM 27 O5' U B 3 -1.572 20.931 49.801 1.00 34.94 O
TER

Atoms:
C4: (3.552,19.290,51.353)
N3: (4.073,20.541,51.636)
OP1: (-3.731,20.117,48.753)
OP2: (-1.902,18.513,49.548)
C2: (3.422,21.743,51.586)
C1': (1.311,22.945,51.169)
C3': (0.375,23.132,49.036)
O5': (-1.572,20.931,49.801)
O4': (-0.080,22.717,51.289)
C5': (-1.941,22.300,49.821)
P: (-2.666,19.771,49.715)
C4': (-0.734,23.175,50.079)
C2': (1.512,23.708,49.859)
O2': (1.385,25.099,50.066)
N1: (2.087,21.655,51.231)
O4: (4.295,18.315,51.440)
O2: (3.992,22.797,51.847)
C6: (1.495,20.430,50.938)
C5: (2.156,19.264,50.981)
O3': (0.099,23.945,47.905)
OP1: (-3.764,14.578,51.708)
OP2: (-1.287,14.517,52.290)
C3': (-2.627,19.414,52.299)
C1': (-1.729,19.875,54.385)
C5': (-3.839,17.279,53.072)
O4': (-2.652,18.809,54.525)
C8: (0.062,18.102,54.026)
O2': (-3.094,21.574,53.379)
C6: (3.139,19.715,54.669)
C5: (1.838,19.204,54.446)
C4: (0.790,20.091,54.616)
P: (-2.665,14.947,52.615)
C4': (-3.490,18.730,53.347)
C2': (-2.111,20.602,53.102)
C2: (2.146,21.759,55.136)
N1: (3.255,21.017,55.017)
N3: (0.877,21.392,54.967)
N6: (4.255,18.983,54.548)
N7: (1.363,17.955,54.068)
N9: (-0.352,19.367,54.344)
O5': (-2.653,16.538,52.794)
O3': (-3.364,19.795,51.151)
Image (generated by PyMOL):
PyMOL image
show in jmol