Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1839:A1838
Extra
PDB:
ATOM 1 O3' U A1838 111.946 -1.363 -12.466 1.00 49.70 O
ATOM 2 P C A1839 111.134 -1.392 -13.841 1.00 44.83 P
ATOM 3 OP1 C A1839 112.103 -1.197 -14.946 1.00 49.59 O
ATOM 4 OP2 C A1839 109.971 -0.476 -13.709 1.00 51.56 O
ATOM 5 O5' C A1839 110.584 -2.881 -13.908 1.00 58.88 O
ATOM 6 C5' C A1839 111.481 -3.981 -13.973 1.00 62.73 C
ATOM 7 C4' C A1839 110.712 -5.275 -14.034 1.00 65.35 C
ATOM 8 O4' C A1839 110.037 -5.512 -12.769 1.00 61.41 O
ATOM 9 C3' C A1839 109.593 -5.342 -15.057 1.00 61.80 C
ATOM 10 O3' C A1839 110.044 -5.653 -16.367 1.00 55.42 O
ATOM 11 C2' C A1839 108.700 -6.443 -14.504 1.00 64.21 C
ATOM 12 O2' C A1839 109.146 -7.732 -14.862 1.00 71.01 O
ATOM 13 C1' C A1839 108.854 -6.257 -12.997 1.00 60.16 C
ATOM 14 N1 C A1839 107.712 -5.553 -12.401 1.00 62.34 N
ATOM 15 C2 C A1839 106.455 -6.161 -12.441 1.00 64.48 C
ATOM 16 O2 C A1839 106.330 -7.253 -13.009 1.00 64.10 O
ATOM 17 N3 C A1839 105.408 -5.540 -11.871 1.00 63.75 N
ATOM 18 C4 C A1839 105.573 -4.355 -11.287 1.00 60.75 C
ATOM 19 N4 C A1839 104.516 -3.791 -10.716 1.00 56.93 N
ATOM 20 C5 C A1839 106.832 -3.700 -11.257 1.00 61.31 C
ATOM 21 C6 C A1839 107.866 -4.331 -11.816 1.00 64.22 C
ATOM 22 P C A1840 109.175 -5.176 -17.625 1.00 60.17 P
ATOM 23 OP1 C A1840 109.785 -5.767 -18.842 1.00 50.07 O
ATOM 24 OP2 C A1840 108.960 -3.704 -17.527 1.00 53.57 O
ATOM 25 O5' C A1840 107.764 -5.865 -17.389 1.00 58.31 O
TER
ATOM 1 O3' G B1837 111.652 3.149 -8.277 1.00 53.59 O
ATOM 2 P U B1838 111.066 3.053 -9.775 1.00 56.55 P
ATOM 3 OP1 U B1838 111.922 3.807 -10.716 1.00 58.79 O
ATOM 4 OP2 U B1838 109.615 3.387 -9.683 1.00 64.07 O
ATOM 5 O5' U B1838 111.157 1.503 -10.121 1.00 61.78 O
ATOM 6 C5' U B1838 112.401 0.825 -10.161 1.00 60.62 C
ATOM 7 C4' U B1838 112.179 -0.667 -10.172 1.00 55.77 C
ATOM 8 O4' U B1838 111.540 -1.065 -8.940 1.00 57.15 O
ATOM 9 C3' U B1838 111.250 -1.183 -11.254 1.00 51.35 C
ATOM 10 O3' U B1838 111.946 -1.363 -12.466 1.00 49.70 O
ATOM 11 C2' U B1838 110.745 -2.489 -10.669 1.00 57.91 C
ATOM 12 O2' U B1838 111.659 -3.550 -10.833 1.00 58.41 O
ATOM 13 C1' U B1838 110.642 -2.132 -9.190 1.00 59.82 C
ATOM 14 N1 U B1838 109.288 -1.677 -8.861 1.00 63.71 N
ATOM 15 C2 U B1838 108.325 -2.638 -8.592 1.00 64.41 C
ATOM 16 O2 U B1838 108.564 -3.841 -8.603 1.00 63.32 O
ATOM 17 N3 U B1838 107.073 -2.136 -8.316 1.00 64.01 N
ATOM 18 C4 U B1838 106.698 -0.798 -8.285 1.00 66.55 C
ATOM 19 O4 U B1838 105.534 -0.498 -8.003 1.00 78.46 O
ATOM 20 C5 U B1838 107.754 0.127 -8.571 1.00 61.73 C
ATOM 21 C6 U B1838 108.978 -0.332 -8.838 1.00 61.23 C
ATOM 22 P C B1839 111.134 -1.392 -13.841 1.00 44.83 P
ATOM 23 OP1 C B1839 112.103 -1.197 -14.946 1.00 49.59 O
ATOM 24 OP2 C B1839 109.971 -0.476 -13.709 1.00 51.56 O
ATOM 25 O5' C B1839 110.584 -2.881 -13.908 1.00 58.88 O
TER
ATOM 2 P C A1839 111.134 -1.392 -13.841 1.00 44.83 P
ATOM 3 OP1 C A1839 112.103 -1.197 -14.946 1.00 49.59 O
ATOM 4 OP2 C A1839 109.971 -0.476 -13.709 1.00 51.56 O
ATOM 5 O5' C A1839 110.584 -2.881 -13.908 1.00 58.88 O
ATOM 6 C5' C A1839 111.481 -3.981 -13.973 1.00 62.73 C
ATOM 7 C4' C A1839 110.712 -5.275 -14.034 1.00 65.35 C
ATOM 8 O4' C A1839 110.037 -5.512 -12.769 1.00 61.41 O
ATOM 9 C3' C A1839 109.593 -5.342 -15.057 1.00 61.80 C
ATOM 10 O3' C A1839 110.044 -5.653 -16.367 1.00 55.42 O
ATOM 11 C2' C A1839 108.700 -6.443 -14.504 1.00 64.21 C
ATOM 12 O2' C A1839 109.146 -7.732 -14.862 1.00 71.01 O
ATOM 13 C1' C A1839 108.854 -6.257 -12.997 1.00 60.16 C
ATOM 14 N1 C A1839 107.712 -5.553 -12.401 1.00 62.34 N
ATOM 15 C2 C A1839 106.455 -6.161 -12.441 1.00 64.48 C
ATOM 16 O2 C A1839 106.330 -7.253 -13.009 1.00 64.10 O
ATOM 17 N3 C A1839 105.408 -5.540 -11.871 1.00 63.75 N
ATOM 18 C4 C A1839 105.573 -4.355 -11.287 1.00 60.75 C
ATOM 19 N4 C A1839 104.516 -3.791 -10.716 1.00 56.93 N
ATOM 20 C5 C A1839 106.832 -3.700 -11.257 1.00 61.31 C
ATOM 21 C6 C A1839 107.866 -4.331 -11.816 1.00 64.22 C
ATOM 22 P C A1840 109.175 -5.176 -17.625 1.00 60.17 P
ATOM 23 OP1 C A1840 109.785 -5.767 -18.842 1.00 50.07 O
ATOM 24 OP2 C A1840 108.960 -3.704 -17.527 1.00 53.57 O
ATOM 25 O5' C A1840 107.764 -5.865 -17.389 1.00 58.31 O
TER
ATOM 1 O3' G B1837 111.652 3.149 -8.277 1.00 53.59 O
ATOM 2 P U B1838 111.066 3.053 -9.775 1.00 56.55 P
ATOM 3 OP1 U B1838 111.922 3.807 -10.716 1.00 58.79 O
ATOM 4 OP2 U B1838 109.615 3.387 -9.683 1.00 64.07 O
ATOM 5 O5' U B1838 111.157 1.503 -10.121 1.00 61.78 O
ATOM 6 C5' U B1838 112.401 0.825 -10.161 1.00 60.62 C
ATOM 7 C4' U B1838 112.179 -0.667 -10.172 1.00 55.77 C
ATOM 8 O4' U B1838 111.540 -1.065 -8.940 1.00 57.15 O
ATOM 9 C3' U B1838 111.250 -1.183 -11.254 1.00 51.35 C
ATOM 10 O3' U B1838 111.946 -1.363 -12.466 1.00 49.70 O
ATOM 11 C2' U B1838 110.745 -2.489 -10.669 1.00 57.91 C
ATOM 12 O2' U B1838 111.659 -3.550 -10.833 1.00 58.41 O
ATOM 13 C1' U B1838 110.642 -2.132 -9.190 1.00 59.82 C
ATOM 14 N1 U B1838 109.288 -1.677 -8.861 1.00 63.71 N
ATOM 15 C2 U B1838 108.325 -2.638 -8.592 1.00 64.41 C
ATOM 16 O2 U B1838 108.564 -3.841 -8.603 1.00 63.32 O
ATOM 17 N3 U B1838 107.073 -2.136 -8.316 1.00 64.01 N
ATOM 18 C4 U B1838 106.698 -0.798 -8.285 1.00 66.55 C
ATOM 19 O4 U B1838 105.534 -0.498 -8.003 1.00 78.46 O
ATOM 20 C5 U B1838 107.754 0.127 -8.571 1.00 61.73 C
ATOM 21 C6 U B1838 108.978 -0.332 -8.838 1.00 61.23 C
ATOM 22 P C B1839 111.134 -1.392 -13.841 1.00 44.83 P
ATOM 23 OP1 C B1839 112.103 -1.197 -14.946 1.00 49.59 O
ATOM 24 OP2 C B1839 109.971 -0.476 -13.709 1.00 51.56 O
ATOM 25 O5' C B1839 110.584 -2.881 -13.908 1.00 58.88 O
TER
Atoms:
C2: (106.455,-6.161,-12.441)
OP1: (112.103,-1.197,-14.946)
OP2: (109.971,-0.476,-13.709)
C4: (105.573,-4.355,-11.287)
O5': (110.584,-2.881,-13.908)
C3': (109.593,-5.342,-15.057)
C1': (108.854,-6.257,-12.997)
O4': (110.037,-5.512,-12.769)
C5': (111.481,-3.981,-13.973)
P: (111.134,-1.392,-13.841)
O2: (106.330,-7.253,-13.009)
C4': (110.712,-5.275,-14.034)
C2': (108.700,-6.443,-14.504)
O2': (109.146,-7.732,-14.862)
N1: (107.712,-5.553,-12.401)
N3: (105.408,-5.540,-11.871)
N4: (104.516,-3.791,-10.716)
C6: (107.866,-4.331,-11.816)
C5: (106.832,-3.700,-11.257)
O3': (110.044,-5.653,-16.367)
OP1: (112.103,-1.197,-14.946)
OP2: (109.971,-0.476,-13.709)
C4: (105.573,-4.355,-11.287)
O5': (110.584,-2.881,-13.908)
C3': (109.593,-5.342,-15.057)
C1': (108.854,-6.257,-12.997)
O4': (110.037,-5.512,-12.769)
C5': (111.481,-3.981,-13.973)
P: (111.134,-1.392,-13.841)
O2: (106.330,-7.253,-13.009)
C4': (110.712,-5.275,-14.034)
C2': (108.700,-6.443,-14.504)
O2': (109.146,-7.732,-14.862)
N1: (107.712,-5.553,-12.401)
N3: (105.408,-5.540,-11.871)
N4: (104.516,-3.791,-10.716)
C6: (107.866,-4.331,-11.816)
C5: (106.832,-3.700,-11.257)
O3': (110.044,-5.653,-16.367)
C4: (106.698,-0.798,-8.285)
N3: (107.073,-2.136,-8.316)
OP1: (111.922,3.807,-10.716)
OP2: (109.615,3.387,-9.683)
C2: (108.325,-2.638,-8.592)
C1': (110.642,-2.132,-9.190)
C3': (111.250,-1.183,-11.254)
O5': (111.157,1.503,-10.121)
O4': (111.540,-1.065,-8.940)
C5': (112.401,0.825,-10.161)
P: (111.066,3.053,-9.775)
C4': (112.179,-0.667,-10.172)
C2': (110.745,-2.489,-10.669)
O2': (111.659,-3.550,-10.833)
N1: (109.288,-1.677,-8.861)
O4: (105.534,-0.498,-8.003)
O2: (108.564,-3.841,-8.603)
C6: (108.978,-0.332,-8.838)
C5: (107.754,0.127,-8.571)
O3': (111.946,-1.363,-12.466)
N3: (107.073,-2.136,-8.316)
OP1: (111.922,3.807,-10.716)
OP2: (109.615,3.387,-9.683)
C2: (108.325,-2.638,-8.592)
C1': (110.642,-2.132,-9.190)
C3': (111.250,-1.183,-11.254)
O5': (111.157,1.503,-10.121)
O4': (111.540,-1.065,-8.940)
C5': (112.401,0.825,-10.161)
P: (111.066,3.053,-9.775)
C4': (112.179,-0.667,-10.172)
C2': (110.745,-2.489,-10.669)
O2': (111.659,-3.550,-10.833)
N1: (109.288,-1.677,-8.861)
O4: (105.534,-0.498,-8.003)
O2: (108.564,-3.841,-8.603)
C6: (108.978,-0.332,-8.838)
C5: (107.754,0.127,-8.571)
O3': (111.946,-1.363,-12.466)
Image (generated by PyMOL):