ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2972:2971

Extra

PDB:
ATOM 1 O3' U A 971 -36.559 -19.326 109.961 1.00 87.56 O
ATOM 2 P C A 972 -36.027 -20.164 108.701 1.00 90.43 P
ATOM 3 OP1 C A 972 -36.652 -21.527 108.773 1.00 91.72 O
ATOM 4 OP2 C A 972 -34.551 -20.062 108.711 1.00 90.36 O
ATOM 5 O5' C A 972 -36.626 -19.349 107.464 1.00 88.99 O
ATOM 6 C5' C A 972 -38.027 -19.173 107.307 1.00 88.78 C
ATOM 7 C4' C A 972 -38.361 -17.779 106.834 1.00 87.32 C
ATOM 8 O4' C A 972 -37.802 -16.817 107.760 1.00 87.01 O
ATOM 9 C3' C A 972 -37.797 -17.373 105.475 1.00 86.20 C
ATOM 10 O3' C A 972 -38.612 -17.776 104.392 1.00 86.01 O
ATOM 11 C2' C A 972 -37.677 -15.865 105.588 1.00 85.01 C
ATOM 12 O2' C A 972 -38.924 -15.235 105.296 1.00 84.40 O
ATOM 13 C1' C A 972 -37.350 -15.679 107.071 1.00 85.66 C
ATOM 14 N1 C A 972 -35.914 -15.548 107.307 1.00 85.66 N
ATOM 15 C2 C A 972 -35.279 -14.341 107.082 1.00 84.55 C
ATOM 16 O2 C A 972 -35.934 -13.370 106.691 1.00 83.56 O
ATOM 17 N3 C A 972 -33.945 -14.258 107.300 1.00 84.61 N
ATOM 18 C4 C A 972 -33.255 -15.317 107.728 1.00 85.74 C
ATOM 19 N4 C A 972 -31.949 -15.188 107.928 1.00 85.80 N
ATOM 20 C5 C A 972 -33.894 -16.560 107.971 1.00 86.89 C
ATOM 21 C6 C A 972 -35.204 -16.621 107.728 1.00 86.79 C
ATOM 22 P G A 973 -37.962 -18.536 103.134 1.00 81.34 P
ATOM 23 OP1 G A 973 -39.083 -18.945 102.239 1.00 81.31 O
ATOM 24 OP2 G A 973 -37.070 -19.580 103.684 1.00 82.50 O
ATOM 25 O5' G A 973 -37.088 -17.403 102.432 1.00 80.01 O
TER

ATOM 1 O3' A B 970 -31.392 -19.044 113.676 1.00100.34 O
ATOM 2 P U B 971 -31.513 -19.254 112.094 1.00 89.01 P
ATOM 3 OP1 U B 971 -31.433 -20.702 111.826 1.00 90.15 O
ATOM 4 OP2 U B 971 -30.511 -18.356 111.472 1.00 87.88 O
ATOM 5 O5' U B 971 -32.984 -18.725 111.775 1.00 88.25 O
ATOM 6 C5' U B 971 -34.143 -19.444 112.181 1.00 89.12 C
ATOM 7 C4' U B 971 -35.392 -18.614 111.980 1.00 88.23 C
ATOM 8 O4' U B 971 -35.201 -17.315 112.582 1.00 87.51 O
ATOM 9 C3' U B 971 -35.764 -18.314 110.534 1.00 87.03 C
ATOM 10 O3' U B 971 -36.559 -19.326 109.961 1.00 87.56 O
ATOM 11 C2' U B 971 -36.484 -16.978 110.623 1.00 85.95 C
ATOM 12 O2' U B 971 -37.839 -17.165 110.967 1.00 86.36 O
ATOM 13 C1' U B 971 -35.788 -16.316 111.793 1.00 86.14 C
ATOM 14 N1 U B 971 -34.739 -15.377 111.379 1.00 85.09 N
ATOM 15 C2 U B 971 -35.143 -14.112 110.967 1.00 83.79 C
ATOM 16 O2 U B 971 -36.330 -13.806 110.885 1.00 83.50 O
ATOM 17 N3 U B 971 -34.119 -13.237 110.654 1.00 82.90 N
ATOM 18 C4 U B 971 -32.769 -13.540 110.732 1.00 83.23 C
ATOM 19 O4 U B 971 -31.950 -12.690 110.413 1.00 82.39 O
ATOM 20 C5 U B 971 -32.436 -14.866 111.186 1.00 84.61 C
ATOM 21 C6 U B 971 -33.412 -15.719 111.500 1.00 85.48 C
ATOM 22 P C B 972 -36.027 -20.164 108.701 1.00 90.43 P
ATOM 23 OP1 C B 972 -36.652 -21.527 108.773 1.00 91.72 O
ATOM 24 OP2 C B 972 -34.551 -20.062 108.711 1.00 90.36 O
ATOM 25 O5' C B 972 -36.626 -19.349 107.464 1.00 88.99 O
TER

Atoms:
C2: (-35.279,-14.341,107.082)
OP1: (-36.652,-21.527,108.773)
OP2: (-34.551,-20.062,108.711)
C4: (-33.255,-15.317,107.728)
O5': (-36.626,-19.349,107.464)
C3': (-37.797,-17.373,105.475)
C1': (-37.350,-15.679,107.071)
O4': (-37.802,-16.817,107.760)
C5': (-38.027,-19.173,107.307)
P: (-36.027,-20.164,108.701)
O2: (-35.934,-13.370,106.691)
C4': (-38.361,-17.779,106.834)
C2': (-37.677,-15.865,105.588)
O2': (-38.924,-15.235,105.296)
N1: (-35.914,-15.548,107.307)
N3: (-33.945,-14.258,107.300)
N4: (-31.949,-15.188,107.928)
C6: (-35.204,-16.621,107.728)
C5: (-33.894,-16.560,107.971)
O3': (-38.612,-17.776,104.392)
C4: (-32.769,-13.540,110.732)
N3: (-34.119,-13.237,110.654)
OP1: (-31.433,-20.702,111.826)
OP2: (-30.511,-18.356,111.472)
C2: (-35.143,-14.112,110.967)
C1': (-35.788,-16.316,111.793)
C3': (-35.764,-18.314,110.534)
O5': (-32.984,-18.725,111.775)
O4': (-35.201,-17.315,112.582)
C5': (-34.143,-19.444,112.181)
P: (-31.513,-19.254,112.094)
C4': (-35.392,-18.614,111.980)
C2': (-36.484,-16.978,110.623)
O2': (-37.839,-17.165,110.967)
N1: (-34.739,-15.377,111.379)
O4: (-31.950,-12.690,110.413)
O2: (-36.330,-13.806,110.885)
C6: (-33.412,-15.719,111.500)
C5: (-32.436,-14.866,111.186)
O3': (-36.559,-19.326,109.961)
Image (generated by PyMOL):
PyMOL image
show in jmol