Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:928:927
Extra
PDB:
ATOM 1 O3' U A 27 70.224 17.400 101.377 1.00 60.78 O
ATOM 2 P C A 28 71.541 17.212 100.480 1.00 59.42 P
ATOM 3 OP1 C A 28 71.934 18.558 100.000 1.00 62.28 O
ATOM 4 OP2 C A 28 71.302 16.131 99.491 1.00 59.00 O
ATOM 5 O5' C A 28 72.626 16.737 101.543 1.00 60.65 O
ATOM 6 C5' C A 28 72.885 17.526 102.719 1.00 62.69 C
ATOM 7 C4' C A 28 72.838 16.665 103.962 1.00 65.70 C
ATOM 8 O4' C A 28 71.563 15.962 104.017 1.00 66.38 O
ATOM 9 C3' C A 28 73.864 15.545 104.060 1.00 65.92 C
ATOM 10 O3' C A 28 75.149 15.999 104.485 1.00 67.52 O
ATOM 11 C2' C A 28 73.213 14.615 105.075 1.00 65.46 C
ATOM 12 O2' C A 28 73.341 15.069 106.407 1.00 62.94 O
ATOM 13 C1' C A 28 71.744 14.702 104.654 1.00 66.83 C
ATOM 14 N1 C A 28 71.347 13.618 103.725 1.00 68.50 N
ATOM 15 C2 C A 28 71.195 12.314 104.234 1.00 68.77 C
ATOM 16 O2 C A 28 71.403 12.107 105.442 1.00 69.21 O
ATOM 17 N3 C A 28 70.829 11.317 103.399 1.00 68.46 N
ATOM 18 C4 C A 28 70.615 11.571 102.108 1.00 68.63 C
ATOM 19 N4 C A 28 70.244 10.556 101.330 1.00 67.80 N
ATOM 20 C5 C A 28 70.767 12.880 101.561 1.00 68.68 C
ATOM 21 C6 C A 28 71.130 13.863 102.397 1.00 68.75 C
ATOM 22 P C A 29 76.465 15.528 103.681 1.00 69.62 P
ATOM 23 OP1 C A 29 77.659 15.879 104.488 1.00 69.13 O
ATOM 24 OP2 C A 29 76.369 16.005 102.276 1.00 70.11 O
ATOM 25 O5' C A 29 76.347 13.941 103.619 1.00 71.20 O
TER
ATOM 1 O3' C B 26 64.703 16.643 97.339 1.00 63.66 O
ATOM 2 P U B 27 66.291 16.451 97.264 1.00 64.76 P
ATOM 3 OP1 U B 27 66.788 17.160 96.055 1.00 65.46 O
ATOM 4 OP2 U B 27 66.583 15.005 97.432 1.00 65.88 O
ATOM 5 O5' U B 27 66.791 17.222 98.560 1.00 61.18 O
ATOM 6 C5' U B 27 68.059 16.940 99.130 1.00 59.68 C
ATOM 7 C4' U B 27 67.974 17.015 100.628 1.00 60.50 C
ATOM 8 O4' U B 27 66.859 16.218 101.099 1.00 61.79 O
ATOM 9 C3' U B 27 69.189 16.432 101.315 1.00 60.41 C
ATOM 10 O3' U B 27 70.224 17.400 101.377 1.00 60.78 O
ATOM 11 C2' U B 27 68.635 16.000 102.665 1.00 60.44 C
ATOM 12 O2' U B 27 68.497 17.049 103.599 1.00 58.52 O
ATOM 13 C1' U B 27 67.245 15.493 102.261 1.00 62.22 C
ATOM 14 N1 U B 27 67.202 14.052 101.941 1.00 63.61 N
ATOM 15 C2 U B 27 67.594 13.147 102.921 1.00 62.82 C
ATOM 16 O2 U B 27 67.991 13.489 104.023 1.00 61.50 O
ATOM 17 N3 U B 27 67.508 11.826 102.556 1.00 63.42 N
ATOM 18 C4 U B 27 67.086 11.322 101.341 1.00 64.04 C
ATOM 19 O4 U B 27 66.995 10.102 101.191 1.00 64.55 O
ATOM 20 C5 U B 27 66.716 12.314 100.380 1.00 63.69 C
ATOM 21 C6 U B 27 66.781 13.607 100.702 1.00 63.15 C
ATOM 22 P C B 28 71.541 17.212 100.480 1.00 59.42 P
ATOM 23 OP1 C B 28 71.934 18.558 100.000 1.00 62.28 O
ATOM 24 OP2 C B 28 71.302 16.131 99.491 1.00 59.00 O
ATOM 25 O5' C B 28 72.626 16.737 101.543 1.00 60.65 O
TER
ATOM 2 P C A 28 71.541 17.212 100.480 1.00 59.42 P
ATOM 3 OP1 C A 28 71.934 18.558 100.000 1.00 62.28 O
ATOM 4 OP2 C A 28 71.302 16.131 99.491 1.00 59.00 O
ATOM 5 O5' C A 28 72.626 16.737 101.543 1.00 60.65 O
ATOM 6 C5' C A 28 72.885 17.526 102.719 1.00 62.69 C
ATOM 7 C4' C A 28 72.838 16.665 103.962 1.00 65.70 C
ATOM 8 O4' C A 28 71.563 15.962 104.017 1.00 66.38 O
ATOM 9 C3' C A 28 73.864 15.545 104.060 1.00 65.92 C
ATOM 10 O3' C A 28 75.149 15.999 104.485 1.00 67.52 O
ATOM 11 C2' C A 28 73.213 14.615 105.075 1.00 65.46 C
ATOM 12 O2' C A 28 73.341 15.069 106.407 1.00 62.94 O
ATOM 13 C1' C A 28 71.744 14.702 104.654 1.00 66.83 C
ATOM 14 N1 C A 28 71.347 13.618 103.725 1.00 68.50 N
ATOM 15 C2 C A 28 71.195 12.314 104.234 1.00 68.77 C
ATOM 16 O2 C A 28 71.403 12.107 105.442 1.00 69.21 O
ATOM 17 N3 C A 28 70.829 11.317 103.399 1.00 68.46 N
ATOM 18 C4 C A 28 70.615 11.571 102.108 1.00 68.63 C
ATOM 19 N4 C A 28 70.244 10.556 101.330 1.00 67.80 N
ATOM 20 C5 C A 28 70.767 12.880 101.561 1.00 68.68 C
ATOM 21 C6 C A 28 71.130 13.863 102.397 1.00 68.75 C
ATOM 22 P C A 29 76.465 15.528 103.681 1.00 69.62 P
ATOM 23 OP1 C A 29 77.659 15.879 104.488 1.00 69.13 O
ATOM 24 OP2 C A 29 76.369 16.005 102.276 1.00 70.11 O
ATOM 25 O5' C A 29 76.347 13.941 103.619 1.00 71.20 O
TER
ATOM 1 O3' C B 26 64.703 16.643 97.339 1.00 63.66 O
ATOM 2 P U B 27 66.291 16.451 97.264 1.00 64.76 P
ATOM 3 OP1 U B 27 66.788 17.160 96.055 1.00 65.46 O
ATOM 4 OP2 U B 27 66.583 15.005 97.432 1.00 65.88 O
ATOM 5 O5' U B 27 66.791 17.222 98.560 1.00 61.18 O
ATOM 6 C5' U B 27 68.059 16.940 99.130 1.00 59.68 C
ATOM 7 C4' U B 27 67.974 17.015 100.628 1.00 60.50 C
ATOM 8 O4' U B 27 66.859 16.218 101.099 1.00 61.79 O
ATOM 9 C3' U B 27 69.189 16.432 101.315 1.00 60.41 C
ATOM 10 O3' U B 27 70.224 17.400 101.377 1.00 60.78 O
ATOM 11 C2' U B 27 68.635 16.000 102.665 1.00 60.44 C
ATOM 12 O2' U B 27 68.497 17.049 103.599 1.00 58.52 O
ATOM 13 C1' U B 27 67.245 15.493 102.261 1.00 62.22 C
ATOM 14 N1 U B 27 67.202 14.052 101.941 1.00 63.61 N
ATOM 15 C2 U B 27 67.594 13.147 102.921 1.00 62.82 C
ATOM 16 O2 U B 27 67.991 13.489 104.023 1.00 61.50 O
ATOM 17 N3 U B 27 67.508 11.826 102.556 1.00 63.42 N
ATOM 18 C4 U B 27 67.086 11.322 101.341 1.00 64.04 C
ATOM 19 O4 U B 27 66.995 10.102 101.191 1.00 64.55 O
ATOM 20 C5 U B 27 66.716 12.314 100.380 1.00 63.69 C
ATOM 21 C6 U B 27 66.781 13.607 100.702 1.00 63.15 C
ATOM 22 P C B 28 71.541 17.212 100.480 1.00 59.42 P
ATOM 23 OP1 C B 28 71.934 18.558 100.000 1.00 62.28 O
ATOM 24 OP2 C B 28 71.302 16.131 99.491 1.00 59.00 O
ATOM 25 O5' C B 28 72.626 16.737 101.543 1.00 60.65 O
TER
Atoms:
C2: (71.195,12.314,104.234)
OP1: (71.934,18.558,100.000)
OP2: (71.302,16.131,99.491)
C4: (70.615,11.571,102.108)
O5': (72.626,16.737,101.543)
C3': (73.864,15.545,104.060)
C1': (71.744,14.702,104.654)
O4': (71.563,15.962,104.017)
C5': (72.885,17.526,102.719)
P: (71.541,17.212,100.480)
O2: (71.403,12.107,105.442)
C4': (72.838,16.665,103.962)
C2': (73.213,14.615,105.075)
O2': (73.341,15.069,106.407)
N1: (71.347,13.618,103.725)
N3: (70.829,11.317,103.399)
N4: (70.244,10.556,101.330)
C6: (71.130,13.863,102.397)
C5: (70.767,12.880,101.561)
O3': (75.149,15.999,104.485)
OP1: (71.934,18.558,100.000)
OP2: (71.302,16.131,99.491)
C4: (70.615,11.571,102.108)
O5': (72.626,16.737,101.543)
C3': (73.864,15.545,104.060)
C1': (71.744,14.702,104.654)
O4': (71.563,15.962,104.017)
C5': (72.885,17.526,102.719)
P: (71.541,17.212,100.480)
O2: (71.403,12.107,105.442)
C4': (72.838,16.665,103.962)
C2': (73.213,14.615,105.075)
O2': (73.341,15.069,106.407)
N1: (71.347,13.618,103.725)
N3: (70.829,11.317,103.399)
N4: (70.244,10.556,101.330)
C6: (71.130,13.863,102.397)
C5: (70.767,12.880,101.561)
O3': (75.149,15.999,104.485)
C4: (67.086,11.322,101.341)
N3: (67.508,11.826,102.556)
OP1: (66.788,17.160,96.055)
OP2: (66.583,15.005,97.432)
C2: (67.594,13.147,102.921)
C1': (67.245,15.493,102.261)
C3': (69.189,16.432,101.315)
O5': (66.791,17.222,98.560)
O4': (66.859,16.218,101.099)
C5': (68.059,16.940,99.130)
P: (66.291,16.451,97.264)
C4': (67.974,17.015,100.628)
C2': (68.635,16.000,102.665)
O2': (68.497,17.049,103.599)
N1: (67.202,14.052,101.941)
O4: (66.995,10.102,101.191)
O2: (67.991,13.489,104.023)
C6: (66.781,13.607,100.702)
C5: (66.716,12.314,100.380)
O3': (70.224,17.400,101.377)
N3: (67.508,11.826,102.556)
OP1: (66.788,17.160,96.055)
OP2: (66.583,15.005,97.432)
C2: (67.594,13.147,102.921)
C1': (67.245,15.493,102.261)
C3': (69.189,16.432,101.315)
O5': (66.791,17.222,98.560)
O4': (66.859,16.218,101.099)
C5': (68.059,16.940,99.130)
P: (66.291,16.451,97.264)
C4': (67.974,17.015,100.628)
C2': (68.635,16.000,102.665)
O2': (68.497,17.049,103.599)
N1: (67.202,14.052,101.941)
O4: (66.995,10.102,101.191)
O2: (67.991,13.489,104.023)
C6: (66.781,13.607,100.702)
C5: (66.716,12.314,100.380)
O3': (70.224,17.400,101.377)
Image (generated by PyMOL):