Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E43:E42
Extra
PDB:
ATOM 1 O3' U A 42 31.303 21.163 103.109 1.00102.52 O
ATOM 2 P C A 43 30.364 22.123 102.213 1.00 79.96 P
ATOM 3 OP1 C A 43 30.593 21.831 100.774 1.00 80.58 O
ATOM 4 OP2 C A 43 30.606 23.497 102.742 1.00 79.76 O
ATOM 5 O5' C A 43 28.878 21.643 102.549 1.00 73.71 O
ATOM 6 C5' C A 43 28.358 20.455 101.932 1.00 94.07 C
ATOM 7 C4' C A 43 26.844 20.405 102.023 1.00 84.50 C
ATOM 8 O4' C A 43 26.425 20.274 103.410 1.00 68.15 O
ATOM 9 C3' C A 43 26.057 21.609 101.516 1.00 73.92 C
ATOM 10 O3' C A 43 25.905 21.569 100.101 1.00 83.99 O
ATOM 11 C2' C A 43 24.713 21.396 102.197 1.00 83.19 C
ATOM 12 O2' C A 43 23.965 20.420 101.492 1.00 55.67 O
ATOM 13 C1' C A 43 25.160 20.890 103.581 1.00 77.84 C
ATOM 14 N1 C A 43 25.328 21.960 104.578 1.00 65.85 N
ATOM 15 C2 C A 43 24.193 22.484 105.231 1.00 62.35 C
ATOM 16 O2 C A 43 23.063 22.030 104.953 1.00 70.38 O
ATOM 17 N3 C A 43 24.365 23.467 106.147 1.00 64.61 N
ATOM 18 C4 C A 43 25.597 23.921 106.421 1.00 69.26 C
ATOM 19 N4 C A 43 25.722 24.873 107.342 1.00 64.85 N
ATOM 20 C5 C A 43 26.757 23.412 105.765 1.00 67.42 C
ATOM 21 C6 C A 43 26.578 22.442 104.866 1.00 68.91 C
ATOM 22 P C A 44 25.766 22.943 99.277 1.00 71.18 P
ATOM 23 OP1 C A 44 25.553 22.605 97.848 1.00 77.11 O
ATOM 24 OP2 C A 44 26.898 23.823 99.654 1.00 75.04 O
ATOM 25 O5' C A 44 24.413 23.556 99.836 1.00 55.98 O
TER
ATOM 1 O3' C B 41 35.124 22.045 102.708 1.00 56.13 O
ATOM 2 P U B 42 35.341 22.806 104.124 1.00 71.94 P
ATOM 3 OP1 U B 42 34.607 24.093 104.127 1.00 59.89 O
ATOM 4 OP2 U B 42 36.795 22.812 104.442 1.00 73.20 O
ATOM 5 O5' U B 42 34.606 21.880 105.194 1.00 87.80 O
ATOM 6 C5' U B 42 34.064 20.627 104.824 1.00 97.77 C
ATOM 7 C4' U B 42 32.581 20.581 105.145 1.00104.51 C
ATOM 8 O4' U B 42 32.354 20.892 106.555 1.00 86.31 O
ATOM 9 C3' U B 42 31.676 21.573 104.417 1.00107.45 C
ATOM 10 O3' U B 42 31.303 21.163 103.109 1.00102.52 O
ATOM 11 C2' U B 42 30.460 21.557 105.336 1.00113.19 C
ATOM 12 O2' U B 42 29.759 20.329 105.183 1.00115.68 O
ATOM 13 C1' U B 42 31.134 21.608 106.703 1.00 99.66 C
ATOM 14 N1 U B 42 31.464 22.958 107.206 1.00 87.55 N
ATOM 15 C2 U B 42 30.438 23.827 107.570 1.00 91.12 C
ATOM 16 O2 U B 42 29.254 23.552 107.474 1.00 90.05 O
ATOM 17 N3 U B 42 30.852 25.045 108.071 1.00 92.92 N
ATOM 18 C4 U B 42 32.156 25.469 108.243 1.00 90.63 C
ATOM 19 O4 U B 42 32.368 26.583 108.732 1.00 95.79 O
ATOM 20 C5 U B 42 33.148 24.523 107.836 1.00 85.06 C
ATOM 21 C6 U B 42 32.785 23.338 107.343 1.00 83.25 C
ATOM 22 P C B 43 30.364 22.123 102.213 1.00 79.96 P
ATOM 23 OP1 C B 43 30.593 21.831 100.774 1.00 80.58 O
ATOM 24 OP2 C B 43 30.606 23.497 102.742 1.00 79.76 O
ATOM 25 O5' C B 43 28.878 21.643 102.549 1.00 73.71 O
TER
ATOM 2 P C A 43 30.364 22.123 102.213 1.00 79.96 P
ATOM 3 OP1 C A 43 30.593 21.831 100.774 1.00 80.58 O
ATOM 4 OP2 C A 43 30.606 23.497 102.742 1.00 79.76 O
ATOM 5 O5' C A 43 28.878 21.643 102.549 1.00 73.71 O
ATOM 6 C5' C A 43 28.358 20.455 101.932 1.00 94.07 C
ATOM 7 C4' C A 43 26.844 20.405 102.023 1.00 84.50 C
ATOM 8 O4' C A 43 26.425 20.274 103.410 1.00 68.15 O
ATOM 9 C3' C A 43 26.057 21.609 101.516 1.00 73.92 C
ATOM 10 O3' C A 43 25.905 21.569 100.101 1.00 83.99 O
ATOM 11 C2' C A 43 24.713 21.396 102.197 1.00 83.19 C
ATOM 12 O2' C A 43 23.965 20.420 101.492 1.00 55.67 O
ATOM 13 C1' C A 43 25.160 20.890 103.581 1.00 77.84 C
ATOM 14 N1 C A 43 25.328 21.960 104.578 1.00 65.85 N
ATOM 15 C2 C A 43 24.193 22.484 105.231 1.00 62.35 C
ATOM 16 O2 C A 43 23.063 22.030 104.953 1.00 70.38 O
ATOM 17 N3 C A 43 24.365 23.467 106.147 1.00 64.61 N
ATOM 18 C4 C A 43 25.597 23.921 106.421 1.00 69.26 C
ATOM 19 N4 C A 43 25.722 24.873 107.342 1.00 64.85 N
ATOM 20 C5 C A 43 26.757 23.412 105.765 1.00 67.42 C
ATOM 21 C6 C A 43 26.578 22.442 104.866 1.00 68.91 C
ATOM 22 P C A 44 25.766 22.943 99.277 1.00 71.18 P
ATOM 23 OP1 C A 44 25.553 22.605 97.848 1.00 77.11 O
ATOM 24 OP2 C A 44 26.898 23.823 99.654 1.00 75.04 O
ATOM 25 O5' C A 44 24.413 23.556 99.836 1.00 55.98 O
TER
ATOM 1 O3' C B 41 35.124 22.045 102.708 1.00 56.13 O
ATOM 2 P U B 42 35.341 22.806 104.124 1.00 71.94 P
ATOM 3 OP1 U B 42 34.607 24.093 104.127 1.00 59.89 O
ATOM 4 OP2 U B 42 36.795 22.812 104.442 1.00 73.20 O
ATOM 5 O5' U B 42 34.606 21.880 105.194 1.00 87.80 O
ATOM 6 C5' U B 42 34.064 20.627 104.824 1.00 97.77 C
ATOM 7 C4' U B 42 32.581 20.581 105.145 1.00104.51 C
ATOM 8 O4' U B 42 32.354 20.892 106.555 1.00 86.31 O
ATOM 9 C3' U B 42 31.676 21.573 104.417 1.00107.45 C
ATOM 10 O3' U B 42 31.303 21.163 103.109 1.00102.52 O
ATOM 11 C2' U B 42 30.460 21.557 105.336 1.00113.19 C
ATOM 12 O2' U B 42 29.759 20.329 105.183 1.00115.68 O
ATOM 13 C1' U B 42 31.134 21.608 106.703 1.00 99.66 C
ATOM 14 N1 U B 42 31.464 22.958 107.206 1.00 87.55 N
ATOM 15 C2 U B 42 30.438 23.827 107.570 1.00 91.12 C
ATOM 16 O2 U B 42 29.254 23.552 107.474 1.00 90.05 O
ATOM 17 N3 U B 42 30.852 25.045 108.071 1.00 92.92 N
ATOM 18 C4 U B 42 32.156 25.469 108.243 1.00 90.63 C
ATOM 19 O4 U B 42 32.368 26.583 108.732 1.00 95.79 O
ATOM 20 C5 U B 42 33.148 24.523 107.836 1.00 85.06 C
ATOM 21 C6 U B 42 32.785 23.338 107.343 1.00 83.25 C
ATOM 22 P C B 43 30.364 22.123 102.213 1.00 79.96 P
ATOM 23 OP1 C B 43 30.593 21.831 100.774 1.00 80.58 O
ATOM 24 OP2 C B 43 30.606 23.497 102.742 1.00 79.76 O
ATOM 25 O5' C B 43 28.878 21.643 102.549 1.00 73.71 O
TER
Atoms:
C2: (24.193,22.484,105.231)
OP1: (30.593,21.831,100.774)
OP2: (30.606,23.497,102.742)
C4: (25.597,23.921,106.421)
O5': (28.878,21.643,102.549)
C3': (26.057,21.609,101.516)
C1': (25.160,20.890,103.581)
O4': (26.425,20.274,103.410)
C5': (28.358,20.455,101.932)
P: (30.364,22.123,102.213)
O2: (23.063,22.030,104.953)
C4': (26.844,20.405,102.023)
C2': (24.713,21.396,102.197)
O2': (23.965,20.420,101.492)
N1: (25.328,21.960,104.578)
N3: (24.365,23.467,106.147)
N4: (25.722,24.873,107.342)
C6: (26.578,22.442,104.866)
C5: (26.757,23.412,105.765)
O3': (25.905,21.569,100.101)
OP1: (30.593,21.831,100.774)
OP2: (30.606,23.497,102.742)
C4: (25.597,23.921,106.421)
O5': (28.878,21.643,102.549)
C3': (26.057,21.609,101.516)
C1': (25.160,20.890,103.581)
O4': (26.425,20.274,103.410)
C5': (28.358,20.455,101.932)
P: (30.364,22.123,102.213)
O2: (23.063,22.030,104.953)
C4': (26.844,20.405,102.023)
C2': (24.713,21.396,102.197)
O2': (23.965,20.420,101.492)
N1: (25.328,21.960,104.578)
N3: (24.365,23.467,106.147)
N4: (25.722,24.873,107.342)
C6: (26.578,22.442,104.866)
C5: (26.757,23.412,105.765)
O3': (25.905,21.569,100.101)
C4: (32.156,25.469,108.243)
N3: (30.852,25.045,108.071)
OP1: (34.607,24.093,104.127)
OP2: (36.795,22.812,104.442)
C2: (30.438,23.827,107.570)
C1': (31.134,21.608,106.703)
C3': (31.676,21.573,104.417)
O5': (34.606,21.880,105.194)
O4': (32.354,20.892,106.555)
C5': (34.064,20.627,104.824)
P: (35.341,22.806,104.124)
C4': (32.581,20.581,105.145)
C2': (30.460,21.557,105.336)
O2': (29.759,20.329,105.183)
N1: (31.464,22.958,107.206)
O4: (32.368,26.583,108.732)
O2: (29.254,23.552,107.474)
C6: (32.785,23.338,107.343)
C5: (33.148,24.523,107.836)
O3': (31.303,21.163,103.109)
N3: (30.852,25.045,108.071)
OP1: (34.607,24.093,104.127)
OP2: (36.795,22.812,104.442)
C2: (30.438,23.827,107.570)
C1': (31.134,21.608,106.703)
C3': (31.676,21.573,104.417)
O5': (34.606,21.880,105.194)
O4': (32.354,20.892,106.555)
C5': (34.064,20.627,104.824)
P: (35.341,22.806,104.124)
C4': (32.581,20.581,105.145)
C2': (30.460,21.557,105.336)
O2': (29.759,20.329,105.183)
N1: (31.464,22.958,107.206)
O4: (32.368,26.583,108.732)
O2: (29.254,23.552,107.474)
C6: (32.785,23.338,107.343)
C5: (33.148,24.523,107.836)
O3': (31.303,21.163,103.109)
Image (generated by PyMOL):