Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3LA5:A37:A36
Extra
PDB:
ATOM 1 O3' U A 36 9.473 1.833 -3.365 1.00 13.22 O
ATOM 2 P C A 37 8.517 0.535 -3.364 1.00 15.33 P
ATOM 3 OP1 C A 37 9.150 -0.502 -4.216 1.00 20.80 O
ATOM 4 OP2 C A 37 7.137 0.982 -3.611 1.00 16.53 O
ATOM 5 O5' C A 37 8.646 0.049 -1.841 1.00 13.83 O
ATOM 6 C5' C A 37 8.155 0.886 -0.810 1.00 14.25 C
ATOM 7 C4' C A 37 8.985 0.647 0.434 1.00 11.62 C
ATOM 8 O4' C A 37 10.370 1.009 0.172 1.00 13.39 O
ATOM 9 C3' C A 37 8.577 1.514 1.616 1.00 12.05 C
ATOM 10 O3' C A 37 7.512 0.883 2.325 1.00 12.82 O
ATOM 11 C2' C A 37 9.871 1.518 2.423 1.00 10.96 C
ATOM 12 O2' C A 37 10.096 0.288 3.092 1.00 13.29 O
ATOM 13 C1' C A 37 10.901 1.667 1.311 1.00 13.38 C
ATOM 14 N1 C A 37 11.162 3.115 1.027 1.00 12.31 N
ATOM 15 C2 C A 37 11.826 3.846 2.016 1.00 12.10 C
ATOM 16 O2 C A 37 12.178 3.275 3.055 1.00 12.33 O
ATOM 17 N3 C A 37 12.078 5.163 1.817 1.00 13.20 N
ATOM 18 C4 C A 37 11.701 5.736 0.675 1.00 13.25 C
ATOM 19 N4 C A 37 11.992 7.034 0.522 1.00 9.74 N
ATOM 20 C5 C A 37 11.014 5.017 -0.350 1.00 10.45 C
ATOM 21 C6 C A 37 10.758 3.707 -0.140 1.00 13.65 C
ATOM 22 P C A 38 6.305 1.774 2.876 1.00 12.44 P
ATOM 23 OP1 C A 38 5.359 0.840 3.490 1.00 10.54 O
ATOM 24 OP2 C A 38 5.813 2.678 1.811 1.00 11.85 O
ATOM 25 O5' C A 38 7.018 2.686 3.985 1.00 11.12 O
TER
ATOM 1 O3' U B 35 10.708 2.995 -9.676 1.00 21.69 O
ATOM 2 P U B 36 9.365 3.047 -8.804 1.00 23.06 P
ATOM 3 OP1 U B 36 8.632 1.783 -9.053 1.00 23.35 O
ATOM 4 OP2 U B 36 8.686 4.351 -9.030 1.00 22.62 O
ATOM 5 O5' U B 36 9.924 3.041 -7.305 1.00 18.41 O
ATOM 6 C5' U B 36 10.563 1.870 -6.792 1.00 17.55 C
ATOM 7 C4' U B 36 10.854 2.082 -5.321 1.00 16.13 C
ATOM 8 O4' U B 36 11.869 3.108 -5.203 1.00 14.95 O
ATOM 9 C3' U B 36 9.638 2.587 -4.553 1.00 16.60 C
ATOM 10 O3' U B 36 9.473 1.833 -3.365 1.00 13.22 O
ATOM 11 C2' U B 36 9.972 4.057 -4.289 1.00 14.29 C
ATOM 12 O2' U B 36 9.407 4.566 -3.093 1.00 12.17 O
ATOM 13 C1' U B 36 11.483 3.961 -4.147 1.00 15.81 C
ATOM 14 N1 U B 36 12.213 5.242 -4.337 1.00 12.90 N
ATOM 15 C2 U B 36 13.223 5.573 -3.456 1.00 14.72 C
ATOM 16 O2 U B 36 13.528 4.865 -2.507 1.00 14.14 O
ATOM 17 N3 U B 36 13.855 6.768 -3.713 1.00 13.33 N
ATOM 18 C4 U B 36 13.579 7.638 -4.757 1.00 14.90 C
ATOM 19 O4 U B 36 14.215 8.680 -4.871 1.00 15.52 O
ATOM 20 C5 U B 36 12.517 7.215 -5.635 1.00 13.88 C
ATOM 21 C6 U B 36 11.890 6.054 -5.405 1.00 14.55 C
ATOM 22 P C B 37 8.517 0.535 -3.364 1.00 15.33 P
ATOM 23 OP1 C B 37 9.150 -0.502 -4.216 1.00 20.80 O
ATOM 24 OP2 C B 37 7.137 0.982 -3.611 1.00 16.53 O
ATOM 25 O5' C B 37 8.646 0.049 -1.841 1.00 13.83 O
TER
ATOM 2 P C A 37 8.517 0.535 -3.364 1.00 15.33 P
ATOM 3 OP1 C A 37 9.150 -0.502 -4.216 1.00 20.80 O
ATOM 4 OP2 C A 37 7.137 0.982 -3.611 1.00 16.53 O
ATOM 5 O5' C A 37 8.646 0.049 -1.841 1.00 13.83 O
ATOM 6 C5' C A 37 8.155 0.886 -0.810 1.00 14.25 C
ATOM 7 C4' C A 37 8.985 0.647 0.434 1.00 11.62 C
ATOM 8 O4' C A 37 10.370 1.009 0.172 1.00 13.39 O
ATOM 9 C3' C A 37 8.577 1.514 1.616 1.00 12.05 C
ATOM 10 O3' C A 37 7.512 0.883 2.325 1.00 12.82 O
ATOM 11 C2' C A 37 9.871 1.518 2.423 1.00 10.96 C
ATOM 12 O2' C A 37 10.096 0.288 3.092 1.00 13.29 O
ATOM 13 C1' C A 37 10.901 1.667 1.311 1.00 13.38 C
ATOM 14 N1 C A 37 11.162 3.115 1.027 1.00 12.31 N
ATOM 15 C2 C A 37 11.826 3.846 2.016 1.00 12.10 C
ATOM 16 O2 C A 37 12.178 3.275 3.055 1.00 12.33 O
ATOM 17 N3 C A 37 12.078 5.163 1.817 1.00 13.20 N
ATOM 18 C4 C A 37 11.701 5.736 0.675 1.00 13.25 C
ATOM 19 N4 C A 37 11.992 7.034 0.522 1.00 9.74 N
ATOM 20 C5 C A 37 11.014 5.017 -0.350 1.00 10.45 C
ATOM 21 C6 C A 37 10.758 3.707 -0.140 1.00 13.65 C
ATOM 22 P C A 38 6.305 1.774 2.876 1.00 12.44 P
ATOM 23 OP1 C A 38 5.359 0.840 3.490 1.00 10.54 O
ATOM 24 OP2 C A 38 5.813 2.678 1.811 1.00 11.85 O
ATOM 25 O5' C A 38 7.018 2.686 3.985 1.00 11.12 O
TER
ATOM 1 O3' U B 35 10.708 2.995 -9.676 1.00 21.69 O
ATOM 2 P U B 36 9.365 3.047 -8.804 1.00 23.06 P
ATOM 3 OP1 U B 36 8.632 1.783 -9.053 1.00 23.35 O
ATOM 4 OP2 U B 36 8.686 4.351 -9.030 1.00 22.62 O
ATOM 5 O5' U B 36 9.924 3.041 -7.305 1.00 18.41 O
ATOM 6 C5' U B 36 10.563 1.870 -6.792 1.00 17.55 C
ATOM 7 C4' U B 36 10.854 2.082 -5.321 1.00 16.13 C
ATOM 8 O4' U B 36 11.869 3.108 -5.203 1.00 14.95 O
ATOM 9 C3' U B 36 9.638 2.587 -4.553 1.00 16.60 C
ATOM 10 O3' U B 36 9.473 1.833 -3.365 1.00 13.22 O
ATOM 11 C2' U B 36 9.972 4.057 -4.289 1.00 14.29 C
ATOM 12 O2' U B 36 9.407 4.566 -3.093 1.00 12.17 O
ATOM 13 C1' U B 36 11.483 3.961 -4.147 1.00 15.81 C
ATOM 14 N1 U B 36 12.213 5.242 -4.337 1.00 12.90 N
ATOM 15 C2 U B 36 13.223 5.573 -3.456 1.00 14.72 C
ATOM 16 O2 U B 36 13.528 4.865 -2.507 1.00 14.14 O
ATOM 17 N3 U B 36 13.855 6.768 -3.713 1.00 13.33 N
ATOM 18 C4 U B 36 13.579 7.638 -4.757 1.00 14.90 C
ATOM 19 O4 U B 36 14.215 8.680 -4.871 1.00 15.52 O
ATOM 20 C5 U B 36 12.517 7.215 -5.635 1.00 13.88 C
ATOM 21 C6 U B 36 11.890 6.054 -5.405 1.00 14.55 C
ATOM 22 P C B 37 8.517 0.535 -3.364 1.00 15.33 P
ATOM 23 OP1 C B 37 9.150 -0.502 -4.216 1.00 20.80 O
ATOM 24 OP2 C B 37 7.137 0.982 -3.611 1.00 16.53 O
ATOM 25 O5' C B 37 8.646 0.049 -1.841 1.00 13.83 O
TER
Atoms:
C2: (11.826,3.846,2.016)
OP1: (9.150,-0.502,-4.216)
OP2: (7.137,0.982,-3.611)
C4: (11.701,5.736,0.675)
O5': (8.646,0.049,-1.841)
C3': (8.577,1.514,1.616)
C1': (10.901,1.667,1.311)
O4': (10.370,1.009,0.172)
C5': (8.155,0.886,-0.810)
P: (8.517,0.535,-3.364)
O2: (12.178,3.275,3.055)
C4': (8.985,0.647,0.434)
C2': (9.871,1.518,2.423)
O2': (10.096,0.288,3.092)
N1: (11.162,3.115,1.027)
N3: (12.078,5.163,1.817)
N4: (11.992,7.034,0.522)
C6: (10.758,3.707,-0.140)
C5: (11.014,5.017,-0.350)
O3': (7.512,0.883,2.325)
OP1: (9.150,-0.502,-4.216)
OP2: (7.137,0.982,-3.611)
C4: (11.701,5.736,0.675)
O5': (8.646,0.049,-1.841)
C3': (8.577,1.514,1.616)
C1': (10.901,1.667,1.311)
O4': (10.370,1.009,0.172)
C5': (8.155,0.886,-0.810)
P: (8.517,0.535,-3.364)
O2: (12.178,3.275,3.055)
C4': (8.985,0.647,0.434)
C2': (9.871,1.518,2.423)
O2': (10.096,0.288,3.092)
N1: (11.162,3.115,1.027)
N3: (12.078,5.163,1.817)
N4: (11.992,7.034,0.522)
C6: (10.758,3.707,-0.140)
C5: (11.014,5.017,-0.350)
O3': (7.512,0.883,2.325)
C4: (13.579,7.638,-4.757)
N3: (13.855,6.768,-3.713)
OP1: (8.632,1.783,-9.053)
OP2: (8.686,4.351,-9.030)
C2: (13.223,5.573,-3.456)
C1': (11.483,3.961,-4.147)
C3': (9.638,2.587,-4.553)
O5': (9.924,3.041,-7.305)
O4': (11.869,3.108,-5.203)
C5': (10.563,1.870,-6.792)
P: (9.365,3.047,-8.804)
C4': (10.854,2.082,-5.321)
C2': (9.972,4.057,-4.289)
O2': (9.407,4.566,-3.093)
N1: (12.213,5.242,-4.337)
O4: (14.215,8.680,-4.871)
O2: (13.528,4.865,-2.507)
C6: (11.890,6.054,-5.405)
C5: (12.517,7.215,-5.635)
O3': (9.473,1.833,-3.365)
N3: (13.855,6.768,-3.713)
OP1: (8.632,1.783,-9.053)
OP2: (8.686,4.351,-9.030)
C2: (13.223,5.573,-3.456)
C1': (11.483,3.961,-4.147)
C3': (9.638,2.587,-4.553)
O5': (9.924,3.041,-7.305)
O4': (11.869,3.108,-5.203)
C5': (10.563,1.870,-6.792)
P: (9.365,3.047,-8.804)
C4': (10.854,2.082,-5.321)
C2': (9.972,4.057,-4.289)
O2': (9.407,4.566,-3.093)
N1: (12.213,5.242,-4.337)
O4: (14.215,8.680,-4.871)
O2: (13.528,4.865,-2.507)
C6: (11.890,6.054,-5.405)
C5: (12.517,7.215,-5.635)
O3': (9.473,1.833,-3.365)
Image (generated by PyMOL):