Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12268:12267
Extra
PDB:
ATOM 1 O3' A A2267 17.850 -30.290 137.199 1.00 60.40 O
ATOM 2 P U A2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 3 OP1 U A2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 4 OP2 U A2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 5 O5' U A2268 17.028 -28.580 135.583 1.00 66.88 O
ATOM 6 C5' U A2268 17.657 -29.017 134.396 1.00 66.40 C
ATOM 7 C4' U A2268 16.668 -29.119 133.275 1.00 66.01 C
ATOM 8 O4' U A2268 15.668 -30.126 133.594 1.00 66.30 O
ATOM 9 C3' U A2268 15.836 -27.877 133.019 1.00 65.84 C
ATOM 10 O3' U A2268 16.525 -26.855 132.302 1.00 65.43 O
ATOM 11 C2' U A2268 14.643 -28.459 132.290 1.00 65.69 C
ATOM 12 O2' U A2268 15.019 -28.880 130.994 1.00 65.19 O
ATOM 13 C1' U A2268 14.410 -29.707 133.113 1.00 66.15 C
ATOM 14 N1 U A2268 13.504 -29.463 134.263 1.00 66.66 N
ATOM 15 C2 U A2268 12.156 -29.371 134.001 1.00 66.65 C
ATOM 16 O2 U A2268 11.695 -29.453 132.897 1.00 66.25 O
ATOM 17 N3 U A2268 11.325 -29.183 135.050 1.00 67.12 N
ATOM 18 C4 U A2268 11.693 -29.075 136.354 1.00 67.62 C
ATOM 19 O4 U A2268 10.820 -28.908 137.214 1.00 68.04 O
ATOM 20 C5 U A2268 13.109 -29.190 136.560 1.00 67.61 C
ATOM 21 C6 U A2268 13.955 -29.381 135.543 1.00 67.14 C
ATOM 22 P U A2269 16.324 -25.314 132.724 1.00 60.81 P
ATOM 23 OP1 U A2269 17.294 -24.509 131.936 1.00 60.38 O
ATOM 24 OP2 U A2269 16.371 -25.261 134.221 1.00 61.41 O
ATOM 25 O5' U A2269 14.851 -24.992 132.227 1.00 60.69 O
TER
ATOM 1 O3' U B2266 14.411 -30.944 142.226 1.00 57.45 O
ATOM 2 P A B2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 3 OP1 A B2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 4 OP2 A B2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 5 O5' A B2267 15.035 -30.831 139.820 1.00 61.76 O
ATOM 6 C5' A B2267 16.325 -31.448 139.871 1.00 61.77 C
ATOM 7 C4' A B2267 16.733 -32.024 138.531 1.00 61.22 C
ATOM 8 O4' A B2267 15.828 -33.096 138.183 1.00 61.25 O
ATOM 9 C3' A B2267 16.670 -31.070 137.342 1.00 60.61 C
ATOM 10 O3' A B2267 17.850 -30.290 137.199 1.00 60.40 O
ATOM 11 C2' A B2267 16.422 -32.013 136.171 1.00 60.23 C
ATOM 12 O2' A B2267 17.626 -32.655 135.783 1.00 60.07 O
ATOM 13 C1' A B2267 15.533 -33.066 136.811 1.00 60.67 C
ATOM 14 N9 A B2267 14.095 -32.791 136.637 1.00 60.66 N
ATOM 15 C8 A B2267 13.206 -32.487 137.609 1.00 61.10 C
ATOM 16 N7 A B2267 11.988 -32.314 137.143 1.00 60.98 N
ATOM 17 C5 A B2267 12.063 -32.527 135.781 1.00 60.43 C
ATOM 18 C6 A B2267 11.105 -32.504 134.734 1.00 60.07 C
ATOM 19 N6 A B2267 9.799 -32.229 134.850 1.00 60.20 N
ATOM 20 N1 A B2267 11.561 -32.779 133.491 1.00 59.56 N
ATOM 21 C2 A B2267 12.854 -33.058 133.336 1.00 59.43 C
ATOM 22 N3 A B2267 13.830 -33.108 134.232 1.00 59.73 N
ATOM 23 C4 A B2267 13.372 -32.828 135.462 1.00 60.23 C
ATOM 24 P U B2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 25 OP1 U B2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 26 OP2 U B2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 27 O5' U B2268 17.028 -28.580 135.583 1.00 66.88 O
TER
ATOM 2 P U A2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 3 OP1 U A2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 4 OP2 U A2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 5 O5' U A2268 17.028 -28.580 135.583 1.00 66.88 O
ATOM 6 C5' U A2268 17.657 -29.017 134.396 1.00 66.40 C
ATOM 7 C4' U A2268 16.668 -29.119 133.275 1.00 66.01 C
ATOM 8 O4' U A2268 15.668 -30.126 133.594 1.00 66.30 O
ATOM 9 C3' U A2268 15.836 -27.877 133.019 1.00 65.84 C
ATOM 10 O3' U A2268 16.525 -26.855 132.302 1.00 65.43 O
ATOM 11 C2' U A2268 14.643 -28.459 132.290 1.00 65.69 C
ATOM 12 O2' U A2268 15.019 -28.880 130.994 1.00 65.19 O
ATOM 13 C1' U A2268 14.410 -29.707 133.113 1.00 66.15 C
ATOM 14 N1 U A2268 13.504 -29.463 134.263 1.00 66.66 N
ATOM 15 C2 U A2268 12.156 -29.371 134.001 1.00 66.65 C
ATOM 16 O2 U A2268 11.695 -29.453 132.897 1.00 66.25 O
ATOM 17 N3 U A2268 11.325 -29.183 135.050 1.00 67.12 N
ATOM 18 C4 U A2268 11.693 -29.075 136.354 1.00 67.62 C
ATOM 19 O4 U A2268 10.820 -28.908 137.214 1.00 68.04 O
ATOM 20 C5 U A2268 13.109 -29.190 136.560 1.00 67.61 C
ATOM 21 C6 U A2268 13.955 -29.381 135.543 1.00 67.14 C
ATOM 22 P U A2269 16.324 -25.314 132.724 1.00 60.81 P
ATOM 23 OP1 U A2269 17.294 -24.509 131.936 1.00 60.38 O
ATOM 24 OP2 U A2269 16.371 -25.261 134.221 1.00 61.41 O
ATOM 25 O5' U A2269 14.851 -24.992 132.227 1.00 60.69 O
TER
ATOM 1 O3' U B2266 14.411 -30.944 142.226 1.00 57.45 O
ATOM 2 P A B2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 3 OP1 A B2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 4 OP2 A B2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 5 O5' A B2267 15.035 -30.831 139.820 1.00 61.76 O
ATOM 6 C5' A B2267 16.325 -31.448 139.871 1.00 61.77 C
ATOM 7 C4' A B2267 16.733 -32.024 138.531 1.00 61.22 C
ATOM 8 O4' A B2267 15.828 -33.096 138.183 1.00 61.25 O
ATOM 9 C3' A B2267 16.670 -31.070 137.342 1.00 60.61 C
ATOM 10 O3' A B2267 17.850 -30.290 137.199 1.00 60.40 O
ATOM 11 C2' A B2267 16.422 -32.013 136.171 1.00 60.23 C
ATOM 12 O2' A B2267 17.626 -32.655 135.783 1.00 60.07 O
ATOM 13 C1' A B2267 15.533 -33.066 136.811 1.00 60.67 C
ATOM 14 N9 A B2267 14.095 -32.791 136.637 1.00 60.66 N
ATOM 15 C8 A B2267 13.206 -32.487 137.609 1.00 61.10 C
ATOM 16 N7 A B2267 11.988 -32.314 137.143 1.00 60.98 N
ATOM 17 C5 A B2267 12.063 -32.527 135.781 1.00 60.43 C
ATOM 18 C6 A B2267 11.105 -32.504 134.734 1.00 60.07 C
ATOM 19 N6 A B2267 9.799 -32.229 134.850 1.00 60.20 N
ATOM 20 N1 A B2267 11.561 -32.779 133.491 1.00 59.56 N
ATOM 21 C2 A B2267 12.854 -33.058 133.336 1.00 59.43 C
ATOM 22 N3 A B2267 13.830 -33.108 134.232 1.00 59.73 N
ATOM 23 C4 A B2267 13.372 -32.828 135.462 1.00 60.23 C
ATOM 24 P U B2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 25 OP1 U B2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 26 OP2 U B2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 27 O5' U B2268 17.028 -28.580 135.583 1.00 66.88 O
TER
Atoms:
C4: (11.693,-29.075,136.354)
N3: (11.325,-29.183,135.050)
OP1: (19.161,-28.214,136.798)
OP2: (16.948,-28.122,138.035)
C2: (12.156,-29.371,134.001)
C1': (14.410,-29.707,133.113)
C3': (15.836,-27.877,133.019)
O5': (17.028,-28.580,135.583)
O4': (15.668,-30.126,133.594)
C5': (17.657,-29.017,134.396)
P: (17.776,-28.696,136.959)
C4': (16.668,-29.119,133.275)
C2': (14.643,-28.459,132.290)
O2': (15.019,-28.880,130.994)
N1: (13.504,-29.463,134.263)
O4: (10.820,-28.908,137.214)
O2: (11.695,-29.453,132.897)
C6: (13.955,-29.381,135.543)
C5: (13.109,-29.190,136.560)
O3': (16.525,-26.855,132.302)
N3: (11.325,-29.183,135.050)
OP1: (19.161,-28.214,136.798)
OP2: (16.948,-28.122,138.035)
C2: (12.156,-29.371,134.001)
C1': (14.410,-29.707,133.113)
C3': (15.836,-27.877,133.019)
O5': (17.028,-28.580,135.583)
O4': (15.668,-30.126,133.594)
C5': (17.657,-29.017,134.396)
P: (17.776,-28.696,136.959)
C4': (16.668,-29.119,133.275)
C2': (14.643,-28.459,132.290)
O2': (15.019,-28.880,130.994)
N1: (13.504,-29.463,134.263)
O4: (10.820,-28.908,137.214)
O2: (11.695,-29.453,132.897)
C6: (13.955,-29.381,135.543)
C5: (13.109,-29.190,136.560)
O3': (16.525,-26.855,132.302)
OP1: (15.589,-28.936,141.379)
OP2: (13.159,-29.388,140.717)
C3': (16.670,-31.070,137.342)
C1': (15.533,-33.066,136.811)
C5': (16.325,-31.448,139.871)
O4': (15.828,-33.096,138.183)
C8: (13.206,-32.487,137.609)
O2': (17.626,-32.655,135.783)
C6: (11.105,-32.504,134.734)
C5: (12.063,-32.527,135.781)
C4: (13.372,-32.828,135.462)
P: (14.533,-29.901,141.015)
C4': (16.733,-32.024,138.531)
C2': (16.422,-32.013,136.171)
C2: (12.854,-33.058,133.336)
N1: (11.561,-32.779,133.491)
N3: (13.830,-33.108,134.232)
N6: (9.799,-32.229,134.850)
N7: (11.988,-32.314,137.143)
N9: (14.095,-32.791,136.637)
O5': (15.035,-30.831,139.820)
O3': (17.850,-30.290,137.199)
OP2: (13.159,-29.388,140.717)
C3': (16.670,-31.070,137.342)
C1': (15.533,-33.066,136.811)
C5': (16.325,-31.448,139.871)
O4': (15.828,-33.096,138.183)
C8: (13.206,-32.487,137.609)
O2': (17.626,-32.655,135.783)
C6: (11.105,-32.504,134.734)
C5: (12.063,-32.527,135.781)
C4: (13.372,-32.828,135.462)
P: (14.533,-29.901,141.015)
C4': (16.733,-32.024,138.531)
C2': (16.422,-32.013,136.171)
C2: (12.854,-33.058,133.336)
N1: (11.561,-32.779,133.491)
N3: (13.830,-33.108,134.232)
N6: (9.799,-32.229,134.850)
N7: (11.988,-32.314,137.143)
N9: (14.095,-32.791,136.637)
O5': (15.035,-30.831,139.820)
O3': (17.850,-30.290,137.199)
Image (generated by PyMOL):