Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1338:A1337
Extra
PDB:
ATOM 1 O3' U A1337 -6.316 -37.889 28.766 1.00 0.01 O
ATOM 2 P C A1338 -7.451 -36.754 28.430 1.00 1.01 P
ATOM 3 OP1 C A1338 -6.859 -35.841 27.379 1.00 1.01 O
ATOM 4 OP2 C A1338 -7.970 -36.169 29.725 1.00 1.01 O
ATOM 5 O5' C A1338 -8.603 -37.606 27.766 1.00 1.01 O
ATOM 6 C5' C A1338 -8.618 -37.840 26.378 1.00 1.01 C
ATOM 7 C4' C A1338 -9.589 -38.906 26.067 1.00 1.01 C
ATOM 8 O4' C A1338 -8.972 -40.190 26.287 1.00 1.01 O
ATOM 9 C3' C A1338 -10.783 -38.947 26.971 1.00 1.01 C
ATOM 10 O3' C A1338 -11.730 -37.970 26.672 1.00 1.01 O
ATOM 11 C2' C A1338 -11.274 -40.344 26.769 1.00 1.01 C
ATOM 12 O2' C A1338 -11.916 -40.467 25.501 1.00 1.01 O
ATOM 13 C1' C A1338 -9.942 -41.093 26.734 1.00 1.01 C
ATOM 14 N1 C A1338 -9.556 -41.550 28.051 1.00 1.02 N
ATOM 15 C2 C A1338 -10.250 -42.623 28.541 1.00 1.02 C
ATOM 16 O2 C A1338 -11.143 -43.081 27.839 1.00 1.02 O
ATOM 17 N3 C A1338 -9.973 -43.136 29.736 1.00 1.02 N
ATOM 18 C4 C A1338 -9.018 -42.584 30.447 1.00 1.02 C
ATOM 19 N4 C A1338 -8.786 -43.109 31.640 1.00 1.02 N
ATOM 20 C5 C A1338 -8.269 -41.488 29.960 1.00 1.02 C
ATOM 21 C6 C A1338 -8.575 -40.990 28.755 1.00 1.02 C
ATOM 22 P G A1339 -12.402 -37.161 27.873 1.00 0.14 P
ATOM 23 OP1 G A1339 -13.197 -36.049 27.261 1.00 0.14 O
ATOM 24 OP2 G A1339 -11.301 -36.820 28.859 1.00 0.14 O
ATOM 25 O5' G A1339 -13.383 -38.246 28.504 1.00 0.14 O
TER
ATOM 1 O3' G B1336 -5.470 -40.043 34.440 1.00 0.01 O
ATOM 2 P U B1337 -5.847 -40.758 33.078 1.00 0.01 P
ATOM 3 OP1 U B1337 -7.271 -41.076 33.151 1.00 0.01 O
ATOM 4 OP2 U B1337 -4.885 -41.846 32.882 1.00 0.01 O
ATOM 5 O5' U B1337 -5.601 -39.614 32.009 1.00 0.01 O
ATOM 6 C5' U B1337 -6.444 -38.469 31.975 1.00 0.01 C
ATOM 7 C4' U B1337 -5.837 -37.355 31.164 1.00 0.01 C
ATOM 8 O4' U B1337 -4.666 -36.864 31.844 1.00 0.01 O
ATOM 9 C3' U B1337 -5.312 -37.734 29.784 1.00 0.01 C
ATOM 10 O3' U B1337 -6.316 -37.889 28.766 1.00 0.01 O
ATOM 11 C2' U B1337 -4.282 -36.655 29.517 1.00 0.01 C
ATOM 12 O2' U B1337 -4.893 -35.423 29.170 1.00 0.01 O
ATOM 13 C1' U B1337 -3.681 -36.493 30.900 1.00 0.01 C
ATOM 14 N1 U B1337 -2.488 -37.337 31.082 1.00 0.20 N
ATOM 15 C2 U B1337 -1.261 -36.795 30.710 1.00 0.20 C
ATOM 16 O2 U B1337 -1.104 -35.694 30.243 1.00 0.20 O
ATOM 17 N3 U B1337 -0.165 -37.564 30.864 1.00 0.20 N
ATOM 18 C4 U B1337 -0.151 -38.827 31.369 1.00 0.20 C
ATOM 19 O4 U B1337 0.950 -39.416 31.456 1.00 0.20 O
ATOM 20 C5 U B1337 -1.465 -39.331 31.737 1.00 0.20 C
ATOM 21 C6 U B1337 -2.570 -38.595 31.578 1.00 0.20 C
ATOM 22 P C B1338 -7.451 -36.754 28.430 1.00 1.01 P
ATOM 23 OP1 C B1338 -6.859 -35.841 27.379 1.00 1.01 O
ATOM 24 OP2 C B1338 -7.970 -36.169 29.725 1.00 1.01 O
ATOM 25 O5' C B1338 -8.603 -37.606 27.766 1.00 1.01 O
TER
ATOM 2 P C A1338 -7.451 -36.754 28.430 1.00 1.01 P
ATOM 3 OP1 C A1338 -6.859 -35.841 27.379 1.00 1.01 O
ATOM 4 OP2 C A1338 -7.970 -36.169 29.725 1.00 1.01 O
ATOM 5 O5' C A1338 -8.603 -37.606 27.766 1.00 1.01 O
ATOM 6 C5' C A1338 -8.618 -37.840 26.378 1.00 1.01 C
ATOM 7 C4' C A1338 -9.589 -38.906 26.067 1.00 1.01 C
ATOM 8 O4' C A1338 -8.972 -40.190 26.287 1.00 1.01 O
ATOM 9 C3' C A1338 -10.783 -38.947 26.971 1.00 1.01 C
ATOM 10 O3' C A1338 -11.730 -37.970 26.672 1.00 1.01 O
ATOM 11 C2' C A1338 -11.274 -40.344 26.769 1.00 1.01 C
ATOM 12 O2' C A1338 -11.916 -40.467 25.501 1.00 1.01 O
ATOM 13 C1' C A1338 -9.942 -41.093 26.734 1.00 1.01 C
ATOM 14 N1 C A1338 -9.556 -41.550 28.051 1.00 1.02 N
ATOM 15 C2 C A1338 -10.250 -42.623 28.541 1.00 1.02 C
ATOM 16 O2 C A1338 -11.143 -43.081 27.839 1.00 1.02 O
ATOM 17 N3 C A1338 -9.973 -43.136 29.736 1.00 1.02 N
ATOM 18 C4 C A1338 -9.018 -42.584 30.447 1.00 1.02 C
ATOM 19 N4 C A1338 -8.786 -43.109 31.640 1.00 1.02 N
ATOM 20 C5 C A1338 -8.269 -41.488 29.960 1.00 1.02 C
ATOM 21 C6 C A1338 -8.575 -40.990 28.755 1.00 1.02 C
ATOM 22 P G A1339 -12.402 -37.161 27.873 1.00 0.14 P
ATOM 23 OP1 G A1339 -13.197 -36.049 27.261 1.00 0.14 O
ATOM 24 OP2 G A1339 -11.301 -36.820 28.859 1.00 0.14 O
ATOM 25 O5' G A1339 -13.383 -38.246 28.504 1.00 0.14 O
TER
ATOM 1 O3' G B1336 -5.470 -40.043 34.440 1.00 0.01 O
ATOM 2 P U B1337 -5.847 -40.758 33.078 1.00 0.01 P
ATOM 3 OP1 U B1337 -7.271 -41.076 33.151 1.00 0.01 O
ATOM 4 OP2 U B1337 -4.885 -41.846 32.882 1.00 0.01 O
ATOM 5 O5' U B1337 -5.601 -39.614 32.009 1.00 0.01 O
ATOM 6 C5' U B1337 -6.444 -38.469 31.975 1.00 0.01 C
ATOM 7 C4' U B1337 -5.837 -37.355 31.164 1.00 0.01 C
ATOM 8 O4' U B1337 -4.666 -36.864 31.844 1.00 0.01 O
ATOM 9 C3' U B1337 -5.312 -37.734 29.784 1.00 0.01 C
ATOM 10 O3' U B1337 -6.316 -37.889 28.766 1.00 0.01 O
ATOM 11 C2' U B1337 -4.282 -36.655 29.517 1.00 0.01 C
ATOM 12 O2' U B1337 -4.893 -35.423 29.170 1.00 0.01 O
ATOM 13 C1' U B1337 -3.681 -36.493 30.900 1.00 0.01 C
ATOM 14 N1 U B1337 -2.488 -37.337 31.082 1.00 0.20 N
ATOM 15 C2 U B1337 -1.261 -36.795 30.710 1.00 0.20 C
ATOM 16 O2 U B1337 -1.104 -35.694 30.243 1.00 0.20 O
ATOM 17 N3 U B1337 -0.165 -37.564 30.864 1.00 0.20 N
ATOM 18 C4 U B1337 -0.151 -38.827 31.369 1.00 0.20 C
ATOM 19 O4 U B1337 0.950 -39.416 31.456 1.00 0.20 O
ATOM 20 C5 U B1337 -1.465 -39.331 31.737 1.00 0.20 C
ATOM 21 C6 U B1337 -2.570 -38.595 31.578 1.00 0.20 C
ATOM 22 P C B1338 -7.451 -36.754 28.430 1.00 1.01 P
ATOM 23 OP1 C B1338 -6.859 -35.841 27.379 1.00 1.01 O
ATOM 24 OP2 C B1338 -7.970 -36.169 29.725 1.00 1.01 O
ATOM 25 O5' C B1338 -8.603 -37.606 27.766 1.00 1.01 O
TER
Atoms:
C2: (-10.250,-42.623,28.541)
OP1: (-6.859,-35.841,27.379)
OP2: (-7.970,-36.169,29.725)
C4: (-9.018,-42.584,30.447)
O5': (-8.603,-37.606,27.766)
C3': (-10.783,-38.947,26.971)
C1': (-9.942,-41.093,26.734)
O4': (-8.972,-40.190,26.287)
C5': (-8.618,-37.840,26.378)
P: (-7.451,-36.754,28.430)
O2: (-11.143,-43.081,27.839)
C4': (-9.589,-38.906,26.067)
C2': (-11.274,-40.344,26.769)
O2': (-11.916,-40.467,25.501)
N1: (-9.556,-41.550,28.051)
N3: (-9.973,-43.136,29.736)
N4: (-8.786,-43.109,31.640)
C6: (-8.575,-40.990,28.755)
C5: (-8.269,-41.488,29.960)
O3': (-11.730,-37.970,26.672)
OP1: (-6.859,-35.841,27.379)
OP2: (-7.970,-36.169,29.725)
C4: (-9.018,-42.584,30.447)
O5': (-8.603,-37.606,27.766)
C3': (-10.783,-38.947,26.971)
C1': (-9.942,-41.093,26.734)
O4': (-8.972,-40.190,26.287)
C5': (-8.618,-37.840,26.378)
P: (-7.451,-36.754,28.430)
O2: (-11.143,-43.081,27.839)
C4': (-9.589,-38.906,26.067)
C2': (-11.274,-40.344,26.769)
O2': (-11.916,-40.467,25.501)
N1: (-9.556,-41.550,28.051)
N3: (-9.973,-43.136,29.736)
N4: (-8.786,-43.109,31.640)
C6: (-8.575,-40.990,28.755)
C5: (-8.269,-41.488,29.960)
O3': (-11.730,-37.970,26.672)
C4: (-0.151,-38.827,31.369)
N3: (-0.165,-37.564,30.864)
OP1: (-7.271,-41.076,33.151)
OP2: (-4.885,-41.846,32.882)
C2: (-1.261,-36.795,30.710)
C1': (-3.681,-36.493,30.900)
C3': (-5.312,-37.734,29.784)
O5': (-5.601,-39.614,32.009)
O4': (-4.666,-36.864,31.844)
C5': (-6.444,-38.469,31.975)
P: (-5.847,-40.758,33.078)
C4': (-5.837,-37.355,31.164)
C2': (-4.282,-36.655,29.517)
O2': (-4.893,-35.423,29.170)
N1: (-2.488,-37.337,31.082)
O4: (0.950,-39.416,31.456)
O2: (-1.104,-35.694,30.243)
C6: (-2.570,-38.595,31.578)
C5: (-1.465,-39.331,31.737)
O3': (-6.316,-37.889,28.766)
N3: (-0.165,-37.564,30.864)
OP1: (-7.271,-41.076,33.151)
OP2: (-4.885,-41.846,32.882)
C2: (-1.261,-36.795,30.710)
C1': (-3.681,-36.493,30.900)
C3': (-5.312,-37.734,29.784)
O5': (-5.601,-39.614,32.009)
O4': (-4.666,-36.864,31.844)
C5': (-6.444,-38.469,31.975)
P: (-5.847,-40.758,33.078)
C4': (-5.837,-37.355,31.164)
C2': (-4.282,-36.655,29.517)
O2': (-4.893,-35.423,29.170)
N1: (-2.488,-37.337,31.082)
O4: (0.950,-39.416,31.456)
O2: (-1.104,-35.694,30.243)
C6: (-2.570,-38.595,31.578)
C5: (-1.465,-39.331,31.737)
O3': (-6.316,-37.889,28.766)
Image (generated by PyMOL):