Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:B4:B3
Extra
PDB:
ATOM 1 O3' U A 3 44.786 44.132 15.678 1.00 19.72 O
ATOM 2 P C A 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 3 OP1 C A 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 4 OP2 C A 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 5 O5' C A 4 45.334 42.239 14.240 1.00 20.44 O
ATOM 6 C5' C A 4 46.434 42.935 13.649 1.00 19.02 C
ATOM 7 C4' C A 4 47.743 42.486 14.256 1.00 15.31 C
ATOM 8 O4' C A 4 47.756 42.732 15.685 1.00 19.58 O
ATOM 9 C3' C A 4 48.021 40.998 14.152 1.00 16.65 C
ATOM 10 O3' C A 4 48.506 40.670 12.846 1.00 18.41 O
ATOM 11 C2' C A 4 49.064 40.806 15.245 1.00 16.58 C
ATOM 12 O2' C A 4 50.340 41.262 14.838 1.00 21.03 O
ATOM 13 C1' C A 4 48.479 41.691 16.354 1.00 17.13 C
ATOM 14 N1 C A 4 47.541 40.902 17.199 1.00 15.59 N
ATOM 15 C2 C A 4 48.074 39.929 18.063 1.00 14.78 C
ATOM 16 O2 C A 4 49.290 39.821 18.148 1.00 17.89 O
ATOM 17 N3 C A 4 47.231 39.132 18.789 1.00 14.15 N
ATOM 18 C4 C A 4 45.897 39.292 18.674 1.00 14.76 C
ATOM 19 N4 C A 4 45.094 38.471 19.358 1.00 14.57 N
ATOM 20 C5 C A 4 45.329 40.307 17.833 1.00 17.03 C
ATOM 21 C6 C A 4 46.176 41.080 17.127 1.00 16.88 C
ATOM 22 P G A 5 48.320 39.175 12.271 1.00 17.42 P
ATOM 23 OP1 G A 5 48.682 39.273 10.830 1.00 16.01 O
ATOM 24 OP2 G A 5 46.970 38.618 12.633 1.00 18.14 O
ATOM 25 O5' G A 5 49.421 38.362 13.070 1.00 15.37 O
TER
ATOM 1 O3' G B 2 40.853 43.754 17.378 1.00 17.66 O
ATOM 2 P U B 3 40.456 45.073 16.525 1.00 19.70 P
ATOM 3 OP1 U B 3 39.140 45.600 16.985 1.00 20.12 O
ATOM 4 OP2 U B 3 40.668 44.797 15.080 1.00 20.78 O
ATOM 5 O5' U B 3 41.599 46.057 17.000 1.00 17.45 O
ATOM 6 C5' U B 3 42.672 46.459 16.160 1.00 19.24 C
ATOM 7 C4' U B 3 43.980 46.056 16.766 1.00 18.39 C
ATOM 8 O4' U B 3 44.107 46.578 18.107 1.00 18.05 O
ATOM 9 C3' U B 3 44.202 44.561 16.902 1.00 18.25 C
ATOM 10 O3' U B 3 44.786 44.132 15.678 1.00 19.72 O
ATOM 11 C2' U B 3 45.214 44.467 18.048 1.00 16.71 C
ATOM 12 O2' U B 3 46.569 44.557 17.693 1.00 18.89 O
ATOM 13 C1' U B 3 44.846 45.671 18.918 1.00 17.12 C
ATOM 14 N1 U B 3 44.010 45.296 20.068 1.00 15.69 N
ATOM 15 C2 U B 3 44.634 44.750 21.200 1.00 16.35 C
ATOM 16 O2 U B 3 45.829 44.486 21.265 1.00 19.93 O
ATOM 17 N3 U B 3 43.792 44.510 22.257 1.00 14.57 N
ATOM 18 C4 U B 3 42.416 44.733 22.304 1.00 15.50 C
ATOM 19 O4 U B 3 41.814 44.530 23.355 1.00 18.03 O
ATOM 20 C5 U B 3 41.845 45.240 21.089 1.00 16.11 C
ATOM 21 C6 U B 3 42.646 45.503 20.039 1.00 15.81 C
ATOM 22 P C B 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 23 OP1 C B 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 24 OP2 C B 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 25 O5' C B 4 45.334 42.239 14.240 1.00 20.44 O
TER
ATOM 2 P C A 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 3 OP1 C A 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 4 OP2 C A 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 5 O5' C A 4 45.334 42.239 14.240 1.00 20.44 O
ATOM 6 C5' C A 4 46.434 42.935 13.649 1.00 19.02 C
ATOM 7 C4' C A 4 47.743 42.486 14.256 1.00 15.31 C
ATOM 8 O4' C A 4 47.756 42.732 15.685 1.00 19.58 O
ATOM 9 C3' C A 4 48.021 40.998 14.152 1.00 16.65 C
ATOM 10 O3' C A 4 48.506 40.670 12.846 1.00 18.41 O
ATOM 11 C2' C A 4 49.064 40.806 15.245 1.00 16.58 C
ATOM 12 O2' C A 4 50.340 41.262 14.838 1.00 21.03 O
ATOM 13 C1' C A 4 48.479 41.691 16.354 1.00 17.13 C
ATOM 14 N1 C A 4 47.541 40.902 17.199 1.00 15.59 N
ATOM 15 C2 C A 4 48.074 39.929 18.063 1.00 14.78 C
ATOM 16 O2 C A 4 49.290 39.821 18.148 1.00 17.89 O
ATOM 17 N3 C A 4 47.231 39.132 18.789 1.00 14.15 N
ATOM 18 C4 C A 4 45.897 39.292 18.674 1.00 14.76 C
ATOM 19 N4 C A 4 45.094 38.471 19.358 1.00 14.57 N
ATOM 20 C5 C A 4 45.329 40.307 17.833 1.00 17.03 C
ATOM 21 C6 C A 4 46.176 41.080 17.127 1.00 16.88 C
ATOM 22 P G A 5 48.320 39.175 12.271 1.00 17.42 P
ATOM 23 OP1 G A 5 48.682 39.273 10.830 1.00 16.01 O
ATOM 24 OP2 G A 5 46.970 38.618 12.633 1.00 18.14 O
ATOM 25 O5' G A 5 49.421 38.362 13.070 1.00 15.37 O
TER
ATOM 1 O3' G B 2 40.853 43.754 17.378 1.00 17.66 O
ATOM 2 P U B 3 40.456 45.073 16.525 1.00 19.70 P
ATOM 3 OP1 U B 3 39.140 45.600 16.985 1.00 20.12 O
ATOM 4 OP2 U B 3 40.668 44.797 15.080 1.00 20.78 O
ATOM 5 O5' U B 3 41.599 46.057 17.000 1.00 17.45 O
ATOM 6 C5' U B 3 42.672 46.459 16.160 1.00 19.24 C
ATOM 7 C4' U B 3 43.980 46.056 16.766 1.00 18.39 C
ATOM 8 O4' U B 3 44.107 46.578 18.107 1.00 18.05 O
ATOM 9 C3' U B 3 44.202 44.561 16.902 1.00 18.25 C
ATOM 10 O3' U B 3 44.786 44.132 15.678 1.00 19.72 O
ATOM 11 C2' U B 3 45.214 44.467 18.048 1.00 16.71 C
ATOM 12 O2' U B 3 46.569 44.557 17.693 1.00 18.89 O
ATOM 13 C1' U B 3 44.846 45.671 18.918 1.00 17.12 C
ATOM 14 N1 U B 3 44.010 45.296 20.068 1.00 15.69 N
ATOM 15 C2 U B 3 44.634 44.750 21.200 1.00 16.35 C
ATOM 16 O2 U B 3 45.829 44.486 21.265 1.00 19.93 O
ATOM 17 N3 U B 3 43.792 44.510 22.257 1.00 14.57 N
ATOM 18 C4 U B 3 42.416 44.733 22.304 1.00 15.50 C
ATOM 19 O4 U B 3 41.814 44.530 23.355 1.00 18.03 O
ATOM 20 C5 U B 3 41.845 45.240 21.089 1.00 16.11 C
ATOM 21 C6 U B 3 42.646 45.503 20.039 1.00 15.81 C
ATOM 22 P C B 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 23 OP1 C B 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 24 OP2 C B 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 25 O5' C B 4 45.334 42.239 14.240 1.00 20.44 O
TER
Atoms:
C2: (48.074,39.929,18.063)
OP1: (43.478,43.798,13.560)
OP2: (43.231,42.137,15.557)
C4: (45.897,39.292,18.674)
O5': (45.334,42.239,14.240)
C3': (48.021,40.998,14.152)
C1': (48.479,41.691,16.354)
O4': (47.756,42.732,15.685)
C5': (46.434,42.935,13.649)
P: (44.068,43.054,14.746)
O2: (49.290,39.821,18.148)
C4': (47.743,42.486,14.256)
C2': (49.064,40.806,15.245)
O2': (50.340,41.262,14.838)
N1: (47.541,40.902,17.199)
N3: (47.231,39.132,18.789)
N4: (45.094,38.471,19.358)
C6: (46.176,41.080,17.127)
C5: (45.329,40.307,17.833)
O3': (48.506,40.670,12.846)
OP1: (43.478,43.798,13.560)
OP2: (43.231,42.137,15.557)
C4: (45.897,39.292,18.674)
O5': (45.334,42.239,14.240)
C3': (48.021,40.998,14.152)
C1': (48.479,41.691,16.354)
O4': (47.756,42.732,15.685)
C5': (46.434,42.935,13.649)
P: (44.068,43.054,14.746)
O2: (49.290,39.821,18.148)
C4': (47.743,42.486,14.256)
C2': (49.064,40.806,15.245)
O2': (50.340,41.262,14.838)
N1: (47.541,40.902,17.199)
N3: (47.231,39.132,18.789)
N4: (45.094,38.471,19.358)
C6: (46.176,41.080,17.127)
C5: (45.329,40.307,17.833)
O3': (48.506,40.670,12.846)
C4: (42.416,44.733,22.304)
N3: (43.792,44.510,22.257)
OP1: (39.140,45.600,16.985)
OP2: (40.668,44.797,15.080)
C2: (44.634,44.750,21.200)
C1': (44.846,45.671,18.918)
C3': (44.202,44.561,16.902)
O5': (41.599,46.057,17.000)
O4': (44.107,46.578,18.107)
C5': (42.672,46.459,16.160)
P: (40.456,45.073,16.525)
C4': (43.980,46.056,16.766)
C2': (45.214,44.467,18.048)
O2': (46.569,44.557,17.693)
N1: (44.010,45.296,20.068)
O4: (41.814,44.530,23.355)
O2: (45.829,44.486,21.265)
C6: (42.646,45.503,20.039)
C5: (41.845,45.240,21.089)
O3': (44.786,44.132,15.678)
N3: (43.792,44.510,22.257)
OP1: (39.140,45.600,16.985)
OP2: (40.668,44.797,15.080)
C2: (44.634,44.750,21.200)
C1': (44.846,45.671,18.918)
C3': (44.202,44.561,16.902)
O5': (41.599,46.057,17.000)
O4': (44.107,46.578,18.107)
C5': (42.672,46.459,16.160)
P: (40.456,45.073,16.525)
C4': (43.980,46.056,16.766)
C2': (45.214,44.467,18.048)
O2': (46.569,44.557,17.693)
N1: (44.010,45.296,20.068)
O4: (41.814,44.530,23.355)
O2: (45.829,44.486,21.265)
C6: (42.646,45.503,20.039)
C5: (41.845,45.240,21.089)
O3': (44.786,44.132,15.678)
Image (generated by PyMOL):