ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:B28:B27

Extra

PDB:
ATOM 1 O3' U A 27 70.299 17.244 101.912 1.00 74.58 O
ATOM 2 P C A 28 71.622 17.053 101.007 1.00 74.24 P
ATOM 3 OP1 C A 28 71.984 18.413 100.551 1.00 74.36 O
ATOM 4 OP2 C A 28 71.441 15.972 99.999 1.00 74.19 O
ATOM 5 O5' C A 28 72.710 16.598 102.078 1.00 75.64 O
ATOM 6 C5' C A 28 72.918 17.389 103.265 1.00 77.33 C
ATOM 7 C4' C A 28 72.845 16.518 104.507 1.00 79.01 C
ATOM 8 O4' C A 28 71.573 15.806 104.553 1.00 78.20 O
ATOM 9 C3' C A 28 73.872 15.406 104.604 1.00 79.96 C
ATOM 10 O3' C A 28 75.167 15.882 105.009 1.00 81.35 O
ATOM 11 C2' C A 28 73.231 14.454 105.609 1.00 79.16 C
ATOM 12 O2' C A 28 73.401 14.853 106.967 1.00 79.53 O
ATOM 13 C1' C A 28 71.753 14.545 105.206 1.00 78.51 C
ATOM 14 N1 C A 28 71.327 13.451 104.294 1.00 77.16 N
ATOM 15 C2 C A 28 71.161 12.145 104.808 1.00 76.42 C
ATOM 16 O2 C A 28 71.350 11.930 106.016 1.00 77.13 O
ATOM 17 N3 C A 28 70.788 11.151 103.972 1.00 76.08 N
ATOM 18 C4 C A 28 70.572 11.404 102.682 1.00 75.20 C
ATOM 19 N4 C A 28 70.218 10.383 101.895 1.00 74.47 N
ATOM 20 C5 C A 28 70.714 12.710 102.138 1.00 75.07 C
ATOM 21 C6 C A 28 71.095 13.693 102.968 1.00 76.22 C
ATOM 22 P C A 29 76.476 15.336 104.258 1.00 83.01 P
ATOM 23 OP1 C A 29 77.709 15.595 105.059 1.00 81.25 O
ATOM 24 OP2 C A 29 76.391 15.802 102.857 1.00 82.84 O
ATOM 25 O5' C A 29 76.265 13.764 104.202 1.00 83.87 O
TER

ATOM 1 O3' C B 26 64.745 16.617 97.892 1.00 73.90 O
ATOM 2 P U B 27 66.348 16.531 97.805 1.00 71.29 P
ATOM 3 OP1 U B 27 66.804 17.371 96.657 1.00 70.86 O
ATOM 4 OP2 U B 27 66.711 15.106 97.847 1.00 72.79 O
ATOM 5 O5' U B 27 66.831 17.177 99.181 1.00 71.09 O
ATOM 6 C5' U B 27 68.086 16.799 99.758 1.00 71.28 C
ATOM 7 C4' U B 27 68.020 16.829 101.266 1.00 72.77 C
ATOM 8 O4' U B 27 66.949 15.984 101.762 1.00 73.84 O
ATOM 9 C3' U B 27 69.272 16.257 101.896 1.00 73.93 C
ATOM 10 O3' U B 27 70.299 17.244 101.912 1.00 74.58 O
ATOM 11 C2' U B 27 68.782 15.806 103.269 1.00 74.02 C
ATOM 12 O2' U B 27 68.688 16.835 104.226 1.00 73.90 O
ATOM 13 C1' U B 27 67.379 15.287 102.931 1.00 74.95 C
ATOM 14 N1 U B 27 67.307 13.834 102.663 1.00 76.43 N
ATOM 15 C2 U B 27 67.571 12.946 103.701 1.00 76.92 C
ATOM 16 O2 U B 27 67.860 13.303 104.832 1.00 77.16 O
ATOM 17 N3 U B 27 67.479 11.615 103.362 1.00 77.48 N
ATOM 18 C4 U B 27 67.153 11.086 102.131 1.00 76.66 C
ATOM 19 O4 U B 27 67.070 9.862 101.998 1.00 76.00 O
ATOM 20 C5 U B 27 66.898 12.055 101.119 1.00 76.49 C
ATOM 21 C6 U B 27 66.982 13.359 101.407 1.00 76.66 C
ATOM 22 P C B 28 71.622 17.053 101.007 1.00 74.24 P
ATOM 23 OP1 C B 28 71.984 18.413 100.551 1.00 74.36 O
ATOM 24 OP2 C B 28 71.441 15.972 99.999 1.00 74.19 O
ATOM 25 O5' C B 28 72.710 16.598 102.078 1.00 75.64 O
TER

Atoms:
C2: (71.161,12.145,104.808)
OP1: (71.984,18.413,100.551)
OP2: (71.441,15.972,99.999)
C4: (70.572,11.404,102.682)
O5': (72.710,16.598,102.078)
C3': (73.872,15.406,104.604)
C1': (71.753,14.545,105.206)
O4': (71.573,15.806,104.553)
C5': (72.918,17.389,103.265)
P: (71.622,17.053,101.007)
O2: (71.350,11.930,106.016)
C4': (72.845,16.518,104.507)
C2': (73.231,14.454,105.609)
O2': (73.401,14.853,106.967)
N1: (71.327,13.451,104.294)
N3: (70.788,11.151,103.972)
N4: (70.218,10.383,101.895)
C6: (71.095,13.693,102.968)
C5: (70.714,12.710,102.138)
O3': (75.167,15.882,105.009)
C4: (67.153,11.086,102.131)
N3: (67.479,11.615,103.362)
OP1: (66.804,17.371,96.657)
OP2: (66.711,15.106,97.847)
C2: (67.571,12.946,103.701)
C1': (67.379,15.287,102.931)
C3': (69.272,16.257,101.896)
O5': (66.831,17.177,99.181)
O4': (66.949,15.984,101.762)
C5': (68.086,16.799,99.758)
P: (66.348,16.531,97.805)
C4': (68.020,16.829,101.266)
C2': (68.782,15.806,103.269)
O2': (68.688,16.835,104.226)
N1: (67.307,13.834,102.663)
O4: (67.070,9.862,101.998)
O2: (67.860,13.303,104.832)
C6: (66.982,13.359,101.407)
C5: (66.898,12.055,101.119)
O3': (70.299,17.244,101.912)
Image (generated by PyMOL):
PyMOL image
show in jmol