Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A1039:A1038
Extra
PDB:
ATOM 1 O3' U A1038 108.095 56.885 21.929 1.00 75.54 O
ATOM 2 P C A1039 106.783 57.426 22.674 1.00 69.20 P
ATOM 3 OP1 C A1039 106.418 56.455 23.740 1.00 70.57 O
ATOM 4 OP2 C A1039 105.786 57.787 21.623 1.00 67.85 O
ATOM 5 O5' C A1039 107.279 58.766 23.383 1.00 86.88 O
ATOM 6 C5' C A1039 108.171 58.741 24.510 1.00 90.70 C
ATOM 7 C4' C A1039 108.456 60.155 24.975 1.00 86.54 C
ATOM 8 O4' C A1039 109.206 60.841 23.937 1.00 86.14 O
ATOM 9 C3' C A1039 107.209 61.004 25.191 1.00 84.12 C
ATOM 10 O3' C A1039 106.709 60.882 26.519 1.00 83.57 O
ATOM 11 C2' C A1039 107.698 62.410 24.890 1.00 82.58 C
ATOM 12 O2' C A1039 108.343 62.977 26.009 1.00 82.30 O
ATOM 13 C1' C A1039 108.702 62.151 23.765 1.00 85.54 C
ATOM 14 N1 C A1039 108.084 62.224 22.423 1.00 85.43 N
ATOM 15 C2 C A1039 107.720 63.473 21.904 1.00 90.57 C
ATOM 16 O2 C A1039 107.967 64.497 22.563 1.00 95.46 O
ATOM 17 N3 C A1039 107.111 63.535 20.697 1.00 89.09 N
ATOM 18 C4 C A1039 106.874 62.416 20.010 1.00 88.16 C
ATOM 19 N4 C A1039 106.256 62.525 18.830 1.00 87.27 N
ATOM 20 C5 C A1039 107.258 61.136 20.501 1.00 86.89 C
ATOM 21 C6 C A1039 107.854 61.088 21.697 1.00 85.43 C
ATOM 22 P G A1040 105.270 61.507 26.891 1.00 91.21 P
ATOM 23 OP1 G A1040 104.949 61.150 28.303 1.00 86.72 O
ATOM 24 OP2 G A1040 104.313 61.148 25.801 1.00 82.38 O
ATOM 25 O5' G A1040 105.513 63.080 26.824 1.00 87.36 O
TER
ATOM 1 O3' C B1037 109.622 52.892 16.626 1.00 75.13 O
ATOM 2 P U B1038 108.431 53.348 17.610 1.00 80.94 P
ATOM 3 OP1 U B1038 108.530 52.587 18.888 1.00 76.68 O
ATOM 4 OP2 U B1038 107.160 53.333 16.840 1.00 83.17 O
ATOM 5 O5' U B1038 108.775 54.865 17.944 1.00 81.86 O
ATOM 6 C5' U B1038 108.091 55.565 18.971 1.00 79.35 C
ATOM 7 C4' U B1038 109.077 56.340 19.804 1.00 82.74 C
ATOM 8 O4' U B1038 110.000 57.022 18.925 1.00 85.93 O
ATOM 9 C3' U B1038 108.458 57.423 20.667 1.00 78.78 C
ATOM 10 O3' U B1038 108.095 56.885 21.929 1.00 75.54 O
ATOM 11 C2' U B1038 109.582 58.439 20.787 1.00 81.75 C
ATOM 12 O2' U B1038 110.505 58.074 21.796 1.00 78.81 O
ATOM 13 C1' U B1038 110.254 58.325 19.414 1.00 80.88 C
ATOM 14 N1 U B1038 109.752 59.278 18.411 1.00 81.98 N
ATOM 15 C2 U B1038 109.872 60.641 18.660 1.00 85.75 C
ATOM 16 O2 U B1038 110.380 61.094 19.670 1.00 88.61 O
ATOM 17 N3 U B1038 109.372 61.455 17.675 1.00 89.77 N
ATOM 18 C4 U B1038 108.777 61.063 16.491 1.00 90.02 C
ATOM 19 O4 U B1038 108.344 61.922 15.717 1.00 91.17 O
ATOM 20 C5 U B1038 108.696 59.645 16.303 1.00 87.67 C
ATOM 21 C6 U B1038 109.172 58.826 17.243 1.00 85.43 C
ATOM 22 P C B1039 106.783 57.426 22.674 1.00 69.20 P
ATOM 23 OP1 C B1039 106.418 56.455 23.740 1.00 70.57 O
ATOM 24 OP2 C B1039 105.786 57.787 21.623 1.00 67.85 O
ATOM 25 O5' C B1039 107.279 58.766 23.383 1.00 86.88 O
TER
ATOM 2 P C A1039 106.783 57.426 22.674 1.00 69.20 P
ATOM 3 OP1 C A1039 106.418 56.455 23.740 1.00 70.57 O
ATOM 4 OP2 C A1039 105.786 57.787 21.623 1.00 67.85 O
ATOM 5 O5' C A1039 107.279 58.766 23.383 1.00 86.88 O
ATOM 6 C5' C A1039 108.171 58.741 24.510 1.00 90.70 C
ATOM 7 C4' C A1039 108.456 60.155 24.975 1.00 86.54 C
ATOM 8 O4' C A1039 109.206 60.841 23.937 1.00 86.14 O
ATOM 9 C3' C A1039 107.209 61.004 25.191 1.00 84.12 C
ATOM 10 O3' C A1039 106.709 60.882 26.519 1.00 83.57 O
ATOM 11 C2' C A1039 107.698 62.410 24.890 1.00 82.58 C
ATOM 12 O2' C A1039 108.343 62.977 26.009 1.00 82.30 O
ATOM 13 C1' C A1039 108.702 62.151 23.765 1.00 85.54 C
ATOM 14 N1 C A1039 108.084 62.224 22.423 1.00 85.43 N
ATOM 15 C2 C A1039 107.720 63.473 21.904 1.00 90.57 C
ATOM 16 O2 C A1039 107.967 64.497 22.563 1.00 95.46 O
ATOM 17 N3 C A1039 107.111 63.535 20.697 1.00 89.09 N
ATOM 18 C4 C A1039 106.874 62.416 20.010 1.00 88.16 C
ATOM 19 N4 C A1039 106.256 62.525 18.830 1.00 87.27 N
ATOM 20 C5 C A1039 107.258 61.136 20.501 1.00 86.89 C
ATOM 21 C6 C A1039 107.854 61.088 21.697 1.00 85.43 C
ATOM 22 P G A1040 105.270 61.507 26.891 1.00 91.21 P
ATOM 23 OP1 G A1040 104.949 61.150 28.303 1.00 86.72 O
ATOM 24 OP2 G A1040 104.313 61.148 25.801 1.00 82.38 O
ATOM 25 O5' G A1040 105.513 63.080 26.824 1.00 87.36 O
TER
ATOM 1 O3' C B1037 109.622 52.892 16.626 1.00 75.13 O
ATOM 2 P U B1038 108.431 53.348 17.610 1.00 80.94 P
ATOM 3 OP1 U B1038 108.530 52.587 18.888 1.00 76.68 O
ATOM 4 OP2 U B1038 107.160 53.333 16.840 1.00 83.17 O
ATOM 5 O5' U B1038 108.775 54.865 17.944 1.00 81.86 O
ATOM 6 C5' U B1038 108.091 55.565 18.971 1.00 79.35 C
ATOM 7 C4' U B1038 109.077 56.340 19.804 1.00 82.74 C
ATOM 8 O4' U B1038 110.000 57.022 18.925 1.00 85.93 O
ATOM 9 C3' U B1038 108.458 57.423 20.667 1.00 78.78 C
ATOM 10 O3' U B1038 108.095 56.885 21.929 1.00 75.54 O
ATOM 11 C2' U B1038 109.582 58.439 20.787 1.00 81.75 C
ATOM 12 O2' U B1038 110.505 58.074 21.796 1.00 78.81 O
ATOM 13 C1' U B1038 110.254 58.325 19.414 1.00 80.88 C
ATOM 14 N1 U B1038 109.752 59.278 18.411 1.00 81.98 N
ATOM 15 C2 U B1038 109.872 60.641 18.660 1.00 85.75 C
ATOM 16 O2 U B1038 110.380 61.094 19.670 1.00 88.61 O
ATOM 17 N3 U B1038 109.372 61.455 17.675 1.00 89.77 N
ATOM 18 C4 U B1038 108.777 61.063 16.491 1.00 90.02 C
ATOM 19 O4 U B1038 108.344 61.922 15.717 1.00 91.17 O
ATOM 20 C5 U B1038 108.696 59.645 16.303 1.00 87.67 C
ATOM 21 C6 U B1038 109.172 58.826 17.243 1.00 85.43 C
ATOM 22 P C B1039 106.783 57.426 22.674 1.00 69.20 P
ATOM 23 OP1 C B1039 106.418 56.455 23.740 1.00 70.57 O
ATOM 24 OP2 C B1039 105.786 57.787 21.623 1.00 67.85 O
ATOM 25 O5' C B1039 107.279 58.766 23.383 1.00 86.88 O
TER
Atoms:
C2: (107.720,63.473,21.904)
OP1: (106.418,56.455,23.740)
OP2: (105.786,57.787,21.623)
C4: (106.874,62.416,20.010)
O5': (107.279,58.766,23.383)
C3': (107.209,61.004,25.191)
C1': (108.702,62.151,23.765)
O4': (109.206,60.841,23.937)
C5': (108.171,58.741,24.510)
P: (106.783,57.426,22.674)
O2: (107.967,64.497,22.563)
C4': (108.456,60.155,24.975)
C2': (107.698,62.410,24.890)
O2': (108.343,62.977,26.009)
N1: (108.084,62.224,22.423)
N3: (107.111,63.535,20.697)
N4: (106.256,62.525,18.830)
C6: (107.854,61.088,21.697)
C5: (107.258,61.136,20.501)
O3': (106.709,60.882,26.519)
OP1: (106.418,56.455,23.740)
OP2: (105.786,57.787,21.623)
C4: (106.874,62.416,20.010)
O5': (107.279,58.766,23.383)
C3': (107.209,61.004,25.191)
C1': (108.702,62.151,23.765)
O4': (109.206,60.841,23.937)
C5': (108.171,58.741,24.510)
P: (106.783,57.426,22.674)
O2: (107.967,64.497,22.563)
C4': (108.456,60.155,24.975)
C2': (107.698,62.410,24.890)
O2': (108.343,62.977,26.009)
N1: (108.084,62.224,22.423)
N3: (107.111,63.535,20.697)
N4: (106.256,62.525,18.830)
C6: (107.854,61.088,21.697)
C5: (107.258,61.136,20.501)
O3': (106.709,60.882,26.519)
C4: (108.777,61.063,16.491)
N3: (109.372,61.455,17.675)
OP1: (108.530,52.587,18.888)
OP2: (107.160,53.333,16.840)
C2: (109.872,60.641,18.660)
C1': (110.254,58.325,19.414)
C3': (108.458,57.423,20.667)
O5': (108.775,54.865,17.944)
O4': (110.000,57.022,18.925)
C5': (108.091,55.565,18.971)
P: (108.431,53.348,17.610)
C4': (109.077,56.340,19.804)
C2': (109.582,58.439,20.787)
O2': (110.505,58.074,21.796)
N1: (109.752,59.278,18.411)
O4: (108.344,61.922,15.717)
O2: (110.380,61.094,19.670)
C6: (109.172,58.826,17.243)
C5: (108.696,59.645,16.303)
O3': (108.095,56.885,21.929)
N3: (109.372,61.455,17.675)
OP1: (108.530,52.587,18.888)
OP2: (107.160,53.333,16.840)
C2: (109.872,60.641,18.660)
C1': (110.254,58.325,19.414)
C3': (108.458,57.423,20.667)
O5': (108.775,54.865,17.944)
O4': (110.000,57.022,18.925)
C5': (108.091,55.565,18.971)
P: (108.431,53.348,17.610)
C4': (109.077,56.340,19.804)
C2': (109.582,58.439,20.787)
O2': (110.505,58.074,21.796)
N1: (109.752,59.278,18.411)
O4: (108.344,61.922,15.717)
O2: (110.380,61.094,19.670)
C6: (109.172,58.826,17.243)
C5: (108.696,59.645,16.303)
O3': (108.095,56.885,21.929)
Image (generated by PyMOL):