Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01197:01196
Extra
PDB:
ATOM 1 O3' U A1196 39.500 111.650 126.400 1.00 43.23 O
ATOM 2 P C A1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 3 OP1 C A1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 4 OP2 C A1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 5 O5' C A1197 38.394 110.101 124.794 1.00 42.33 O
ATOM 6 C5' C A1197 38.303 109.028 123.852 1.00 38.55 C
ATOM 7 C4' C A1197 36.977 108.314 123.982 1.00 37.31 C
ATOM 8 O4' C A1197 36.256 108.762 125.162 1.00 36.36 O
ATOM 9 C3' C A1197 35.969 108.585 122.884 1.00 37.21 C
ATOM 10 O3' C A1197 36.288 107.847 121.709 1.00 38.71 O
ATOM 11 C2' C A1197 34.684 108.060 123.523 1.00 36.06 C
ATOM 12 O2' C A1197 34.565 106.649 123.484 1.00 35.53 O
ATOM 13 C1' C A1197 34.872 108.486 124.984 1.00 34.75 C
ATOM 14 N1 C A1197 34.068 109.678 125.331 1.00 32.90 N
ATOM 15 C2 C A1197 32.684 109.532 125.433 1.00 29.71 C
ATOM 16 O2 C A1197 32.190 108.414 125.275 1.00 31.42 O
ATOM 17 N3 C A1197 31.920 110.607 125.699 1.00 30.51 N
ATOM 18 C4 C A1197 32.487 111.799 125.872 1.00 31.71 C
ATOM 19 N4 C A1197 31.682 112.842 126.113 1.00 32.45 N
ATOM 20 C5 C A1197 33.900 111.979 125.802 1.00 29.60 C
ATOM 21 C6 C A1197 34.646 110.902 125.533 1.00 30.61 C
ATOM 22 P G A1198 36.889 108.598 120.417 1.00 38.36 P
ATOM 23 OP1 G A1198 36.745 107.628 119.292 1.00 37.71 O
ATOM 24 OP2 G A1198 38.227 109.146 120.754 1.00 36.89 O
ATOM 25 O5' G A1198 35.936 109.848 120.161 1.00 34.87 O
TER
ATOM 1 O3' A B1195 43.953 116.153 125.967 1.00 35.85 O
ATOM 2 P U B1196 43.693 115.320 124.615 1.00 39.38 P
ATOM 3 OP1 U B1196 44.784 114.311 124.523 1.00 38.64 O
ATOM 4 OP2 U B1196 43.451 116.260 123.491 1.00 38.62 O
ATOM 5 O5' U B1196 42.330 114.544 124.872 1.00 37.57 O
ATOM 6 C5' U B1196 42.109 113.894 126.112 1.00 39.90 C
ATOM 7 C4' U B1196 40.637 113.721 126.367 1.00 41.04 C
ATOM 8 O4' U B1196 39.902 114.961 126.287 1.00 40.45 O
ATOM 9 C3' U B1196 39.852 112.716 125.530 1.00 40.48 C
ATOM 10 O3' U B1196 39.500 111.650 126.400 1.00 43.23 O
ATOM 11 C2' U B1196 38.627 113.517 125.063 1.00 39.40 C
ATOM 12 O2' U B1196 37.420 112.787 125.059 1.00 39.06 O
ATOM 13 C1' U B1196 38.555 114.627 126.100 1.00 39.69 C
ATOM 14 N1 U B1196 37.826 115.820 125.653 1.00 41.09 N
ATOM 15 C2 U B1196 36.643 116.120 126.301 1.00 41.82 C
ATOM 16 O2 U B1196 36.204 115.453 127.224 1.00 44.05 O
ATOM 17 N3 U B1196 35.989 117.227 125.825 1.00 40.95 N
ATOM 18 C4 U B1196 36.384 118.041 124.789 1.00 40.30 C
ATOM 19 O4 U B1196 35.631 118.932 124.403 1.00 41.34 O
ATOM 20 C5 U B1196 37.626 117.676 124.185 1.00 40.10 C
ATOM 21 C6 U B1196 38.289 116.607 124.626 1.00 39.66 C
ATOM 22 P C B1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 23 OP1 C B1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 24 OP2 C B1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 25 O5' C B1197 38.394 110.101 124.794 1.00 42.33 O
TER
ATOM 2 P C A1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 3 OP1 C A1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 4 OP2 C A1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 5 O5' C A1197 38.394 110.101 124.794 1.00 42.33 O
ATOM 6 C5' C A1197 38.303 109.028 123.852 1.00 38.55 C
ATOM 7 C4' C A1197 36.977 108.314 123.982 1.00 37.31 C
ATOM 8 O4' C A1197 36.256 108.762 125.162 1.00 36.36 O
ATOM 9 C3' C A1197 35.969 108.585 122.884 1.00 37.21 C
ATOM 10 O3' C A1197 36.288 107.847 121.709 1.00 38.71 O
ATOM 11 C2' C A1197 34.684 108.060 123.523 1.00 36.06 C
ATOM 12 O2' C A1197 34.565 106.649 123.484 1.00 35.53 O
ATOM 13 C1' C A1197 34.872 108.486 124.984 1.00 34.75 C
ATOM 14 N1 C A1197 34.068 109.678 125.331 1.00 32.90 N
ATOM 15 C2 C A1197 32.684 109.532 125.433 1.00 29.71 C
ATOM 16 O2 C A1197 32.190 108.414 125.275 1.00 31.42 O
ATOM 17 N3 C A1197 31.920 110.607 125.699 1.00 30.51 N
ATOM 18 C4 C A1197 32.487 111.799 125.872 1.00 31.71 C
ATOM 19 N4 C A1197 31.682 112.842 126.113 1.00 32.45 N
ATOM 20 C5 C A1197 33.900 111.979 125.802 1.00 29.60 C
ATOM 21 C6 C A1197 34.646 110.902 125.533 1.00 30.61 C
ATOM 22 P G A1198 36.889 108.598 120.417 1.00 38.36 P
ATOM 23 OP1 G A1198 36.745 107.628 119.292 1.00 37.71 O
ATOM 24 OP2 G A1198 38.227 109.146 120.754 1.00 36.89 O
ATOM 25 O5' G A1198 35.936 109.848 120.161 1.00 34.87 O
TER
ATOM 1 O3' A B1195 43.953 116.153 125.967 1.00 35.85 O
ATOM 2 P U B1196 43.693 115.320 124.615 1.00 39.38 P
ATOM 3 OP1 U B1196 44.784 114.311 124.523 1.00 38.64 O
ATOM 4 OP2 U B1196 43.451 116.260 123.491 1.00 38.62 O
ATOM 5 O5' U B1196 42.330 114.544 124.872 1.00 37.57 O
ATOM 6 C5' U B1196 42.109 113.894 126.112 1.00 39.90 C
ATOM 7 C4' U B1196 40.637 113.721 126.367 1.00 41.04 C
ATOM 8 O4' U B1196 39.902 114.961 126.287 1.00 40.45 O
ATOM 9 C3' U B1196 39.852 112.716 125.530 1.00 40.48 C
ATOM 10 O3' U B1196 39.500 111.650 126.400 1.00 43.23 O
ATOM 11 C2' U B1196 38.627 113.517 125.063 1.00 39.40 C
ATOM 12 O2' U B1196 37.420 112.787 125.059 1.00 39.06 O
ATOM 13 C1' U B1196 38.555 114.627 126.100 1.00 39.69 C
ATOM 14 N1 U B1196 37.826 115.820 125.653 1.00 41.09 N
ATOM 15 C2 U B1196 36.643 116.120 126.301 1.00 41.82 C
ATOM 16 O2 U B1196 36.204 115.453 127.224 1.00 44.05 O
ATOM 17 N3 U B1196 35.989 117.227 125.825 1.00 40.95 N
ATOM 18 C4 U B1196 36.384 118.041 124.789 1.00 40.30 C
ATOM 19 O4 U B1196 35.631 118.932 124.403 1.00 41.34 O
ATOM 20 C5 U B1196 37.626 117.676 124.185 1.00 40.10 C
ATOM 21 C6 U B1196 38.289 116.607 124.626 1.00 39.66 C
ATOM 22 P C B1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 23 OP1 C B1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 24 OP2 C B1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 25 O5' C B1197 38.394 110.101 124.794 1.00 42.33 O
TER
Atoms:
C2: (32.684,109.532,125.433)
OP1: (39.191,109.281,127.018)
OP2: (40.862,109.918,125.185)
C4: (32.487,111.799,125.872)
O5': (38.394,110.101,124.794)
C3': (35.969,108.585,122.884)
C1': (34.872,108.486,124.984)
O4': (36.256,108.762,125.162)
C5': (38.303,109.028,123.852)
P: (39.567,110.142,125.873)
O2: (32.190,108.414,125.275)
C4': (36.977,108.314,123.982)
C2': (34.684,108.060,123.523)
O2': (34.565,106.649,123.484)
N1: (34.068,109.678,125.331)
N3: (31.920,110.607,125.699)
N4: (31.682,112.842,126.113)
C6: (34.646,110.902,125.533)
C5: (33.900,111.979,125.802)
O3': (36.288,107.847,121.709)
OP1: (39.191,109.281,127.018)
OP2: (40.862,109.918,125.185)
C4: (32.487,111.799,125.872)
O5': (38.394,110.101,124.794)
C3': (35.969,108.585,122.884)
C1': (34.872,108.486,124.984)
O4': (36.256,108.762,125.162)
C5': (38.303,109.028,123.852)
P: (39.567,110.142,125.873)
O2: (32.190,108.414,125.275)
C4': (36.977,108.314,123.982)
C2': (34.684,108.060,123.523)
O2': (34.565,106.649,123.484)
N1: (34.068,109.678,125.331)
N3: (31.920,110.607,125.699)
N4: (31.682,112.842,126.113)
C6: (34.646,110.902,125.533)
C5: (33.900,111.979,125.802)
O3': (36.288,107.847,121.709)
C4: (36.384,118.041,124.789)
N3: (35.989,117.227,125.825)
OP1: (44.784,114.311,124.523)
OP2: (43.451,116.260,123.491)
C2: (36.643,116.120,126.301)
C1': (38.555,114.627,126.100)
C3': (39.852,112.716,125.530)
O5': (42.330,114.544,124.872)
O4': (39.902,114.961,126.287)
C5': (42.109,113.894,126.112)
P: (43.693,115.320,124.615)
C4': (40.637,113.721,126.367)
C2': (38.627,113.517,125.063)
O2': (37.420,112.787,125.059)
N1: (37.826,115.820,125.653)
O4: (35.631,118.932,124.403)
O2: (36.204,115.453,127.224)
C6: (38.289,116.607,124.626)
C5: (37.626,117.676,124.185)
O3': (39.500,111.650,126.400)
N3: (35.989,117.227,125.825)
OP1: (44.784,114.311,124.523)
OP2: (43.451,116.260,123.491)
C2: (36.643,116.120,126.301)
C1': (38.555,114.627,126.100)
C3': (39.852,112.716,125.530)
O5': (42.330,114.544,124.872)
O4': (39.902,114.961,126.287)
C5': (42.109,113.894,126.112)
P: (43.693,115.320,124.615)
C4': (40.637,113.721,126.367)
C2': (38.627,113.517,125.063)
O2': (37.420,112.787,125.059)
N1: (37.826,115.820,125.653)
O4: (35.631,118.932,124.403)
O2: (36.204,115.453,127.224)
C6: (38.289,116.607,124.626)
C5: (37.626,117.676,124.185)
O3': (39.500,111.650,126.400)
Image (generated by PyMOL):