Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A1:A0
Extra
PDB:
ATOM 1 O3' U A 0 29.336 -5.929 21.692 1.00 1.00 O
ATOM 2 P C A 1 28.902 -4.698 22.604 1.00 1.00 P
ATOM 3 OP1 C A 1 28.842 -5.099 24.055 1.00 1.00 O
ATOM 4 OP2 C A 1 27.521 -4.385 22.126 1.00 1.00 O
ATOM 5 O5' C A 1 30.006 -3.556 22.395 1.00 1.00 O
ATOM 6 C5' C A 1 30.748 -3.148 23.576 1.00 1.00 C
ATOM 7 C4' C A 1 31.809 -2.135 23.232 1.00 1.00 C
ATOM 8 O4' C A 1 32.762 -2.713 22.335 1.00 1.00 O
ATOM 9 C3' C A 1 31.345 -0.897 22.470 1.00 1.00 C
ATOM 10 O3' C A 1 30.699 0.089 23.277 1.00 1.00 O
ATOM 11 C2' C A 1 32.659 -0.387 21.872 1.00 1.00 C
ATOM 12 O2' C A 1 33.359 0.273 22.918 1.00 1.00 O
ATOM 13 C1' C A 1 33.310 -1.706 21.498 1.00 1.00 C
ATOM 14 N1 C A 1 33.021 -1.992 20.078 1.00 1.00 N
ATOM 15 C2 C A 1 33.684 -1.244 19.121 1.00 1.00 C
ATOM 16 O2 C A 1 34.480 -0.367 19.465 1.00 1.00 O
ATOM 17 N3 C A 1 33.419 -1.502 17.805 1.00 1.00 N
ATOM 18 C4 C A 1 32.538 -2.468 17.432 1.00 1.00 C
ATOM 19 N4 C A 1 32.315 -2.686 16.131 1.00 1.00 N
ATOM 20 C5 C A 1 31.863 -3.236 18.418 1.00 1.00 C
ATOM 21 C6 C A 1 32.134 -2.964 19.704 1.00 1.00 C
ATOM 22 P C A 2 29.771 1.136 22.455 1.00 1.00 P
ATOM 23 OP1 C A 2 28.860 1.925 23.337 1.00 1.00 O
ATOM 24 OP2 C A 2 29.011 0.232 21.573 1.00 1.00 O
ATOM 25 O5' C A 2 30.862 2.054 21.767 1.00 1.00 O
TER
ATOM 1 OP3 U B 0 26.966 -10.492 21.139 1.00 1.00 O
ATOM 2 P U B 0 28.076 -9.771 22.066 1.00 1.00 P
ATOM 3 OP1 U B 0 27.280 -9.302 23.232 1.00 1.00 O
ATOM 4 OP2 U B 0 29.167 -10.716 22.455 1.00 1.00 O
ATOM 5 O5' U B 0 28.649 -8.615 21.124 1.00 1.00 O
ATOM 6 C5' U B 0 29.981 -8.812 20.571 1.00 1.00 C
ATOM 7 C4' U B 0 30.862 -7.779 21.229 1.00 1.00 C
ATOM 8 O4' U B 0 32.164 -7.860 20.691 1.00 1.00 O
ATOM 9 C3' U B 0 30.446 -6.317 20.930 1.00 1.00 C
ATOM 10 O3' U B 0 29.336 -5.929 21.692 1.00 1.00 O
ATOM 11 C2' U B 0 31.766 -5.596 21.244 1.00 1.00 C
ATOM 12 O2' U B 0 31.869 -5.528 22.664 1.00 1.00 O
ATOM 13 C1' U B 0 32.773 -6.555 20.676 1.00 1.00 C
ATOM 14 N1 U B 0 33.177 -6.310 19.285 1.00 1.00 N
ATOM 15 C2 U B 0 34.414 -5.739 19.031 1.00 1.00 C
ATOM 16 O2 U B 0 35.155 -5.433 19.958 1.00 1.00 O
ATOM 17 N3 U B 0 34.781 -5.528 17.731 1.00 1.00 N
ATOM 18 C4 U B 0 33.973 -5.861 16.684 1.00 1.00 C
ATOM 19 O4 U B 0 34.383 -5.637 15.518 1.00 1.00 O
ATOM 20 C5 U B 0 32.701 -6.453 16.953 1.00 1.00 C
ATOM 21 C6 U B 0 32.357 -6.650 18.239 1.00 1.00 C
ATOM 22 P C B 1 28.902 -4.698 22.604 1.00 1.00 P
ATOM 23 OP1 C B 1 28.842 -5.099 24.055 1.00 1.00 O
ATOM 24 OP2 C B 1 27.521 -4.385 22.126 1.00 1.00 O
ATOM 25 O5' C B 1 30.006 -3.556 22.395 1.00 1.00 O
TER
ATOM 2 P C A 1 28.902 -4.698 22.604 1.00 1.00 P
ATOM 3 OP1 C A 1 28.842 -5.099 24.055 1.00 1.00 O
ATOM 4 OP2 C A 1 27.521 -4.385 22.126 1.00 1.00 O
ATOM 5 O5' C A 1 30.006 -3.556 22.395 1.00 1.00 O
ATOM 6 C5' C A 1 30.748 -3.148 23.576 1.00 1.00 C
ATOM 7 C4' C A 1 31.809 -2.135 23.232 1.00 1.00 C
ATOM 8 O4' C A 1 32.762 -2.713 22.335 1.00 1.00 O
ATOM 9 C3' C A 1 31.345 -0.897 22.470 1.00 1.00 C
ATOM 10 O3' C A 1 30.699 0.089 23.277 1.00 1.00 O
ATOM 11 C2' C A 1 32.659 -0.387 21.872 1.00 1.00 C
ATOM 12 O2' C A 1 33.359 0.273 22.918 1.00 1.00 O
ATOM 13 C1' C A 1 33.310 -1.706 21.498 1.00 1.00 C
ATOM 14 N1 C A 1 33.021 -1.992 20.078 1.00 1.00 N
ATOM 15 C2 C A 1 33.684 -1.244 19.121 1.00 1.00 C
ATOM 16 O2 C A 1 34.480 -0.367 19.465 1.00 1.00 O
ATOM 17 N3 C A 1 33.419 -1.502 17.805 1.00 1.00 N
ATOM 18 C4 C A 1 32.538 -2.468 17.432 1.00 1.00 C
ATOM 19 N4 C A 1 32.315 -2.686 16.131 1.00 1.00 N
ATOM 20 C5 C A 1 31.863 -3.236 18.418 1.00 1.00 C
ATOM 21 C6 C A 1 32.134 -2.964 19.704 1.00 1.00 C
ATOM 22 P C A 2 29.771 1.136 22.455 1.00 1.00 P
ATOM 23 OP1 C A 2 28.860 1.925 23.337 1.00 1.00 O
ATOM 24 OP2 C A 2 29.011 0.232 21.573 1.00 1.00 O
ATOM 25 O5' C A 2 30.862 2.054 21.767 1.00 1.00 O
TER
ATOM 1 OP3 U B 0 26.966 -10.492 21.139 1.00 1.00 O
ATOM 2 P U B 0 28.076 -9.771 22.066 1.00 1.00 P
ATOM 3 OP1 U B 0 27.280 -9.302 23.232 1.00 1.00 O
ATOM 4 OP2 U B 0 29.167 -10.716 22.455 1.00 1.00 O
ATOM 5 O5' U B 0 28.649 -8.615 21.124 1.00 1.00 O
ATOM 6 C5' U B 0 29.981 -8.812 20.571 1.00 1.00 C
ATOM 7 C4' U B 0 30.862 -7.779 21.229 1.00 1.00 C
ATOM 8 O4' U B 0 32.164 -7.860 20.691 1.00 1.00 O
ATOM 9 C3' U B 0 30.446 -6.317 20.930 1.00 1.00 C
ATOM 10 O3' U B 0 29.336 -5.929 21.692 1.00 1.00 O
ATOM 11 C2' U B 0 31.766 -5.596 21.244 1.00 1.00 C
ATOM 12 O2' U B 0 31.869 -5.528 22.664 1.00 1.00 O
ATOM 13 C1' U B 0 32.773 -6.555 20.676 1.00 1.00 C
ATOM 14 N1 U B 0 33.177 -6.310 19.285 1.00 1.00 N
ATOM 15 C2 U B 0 34.414 -5.739 19.031 1.00 1.00 C
ATOM 16 O2 U B 0 35.155 -5.433 19.958 1.00 1.00 O
ATOM 17 N3 U B 0 34.781 -5.528 17.731 1.00 1.00 N
ATOM 18 C4 U B 0 33.973 -5.861 16.684 1.00 1.00 C
ATOM 19 O4 U B 0 34.383 -5.637 15.518 1.00 1.00 O
ATOM 20 C5 U B 0 32.701 -6.453 16.953 1.00 1.00 C
ATOM 21 C6 U B 0 32.357 -6.650 18.239 1.00 1.00 C
ATOM 22 P C B 1 28.902 -4.698 22.604 1.00 1.00 P
ATOM 23 OP1 C B 1 28.842 -5.099 24.055 1.00 1.00 O
ATOM 24 OP2 C B 1 27.521 -4.385 22.126 1.00 1.00 O
ATOM 25 O5' C B 1 30.006 -3.556 22.395 1.00 1.00 O
TER
Atoms:
C2: (33.684,-1.244,19.121)
OP1: (28.842,-5.099,24.055)
OP2: (27.521,-4.385,22.126)
C4: (32.538,-2.468,17.432)
O5': (30.006,-3.556,22.395)
C3': (31.345,-0.897,22.470)
C1': (33.310,-1.706,21.498)
O4': (32.762,-2.713,22.335)
C5': (30.748,-3.148,23.576)
P: (28.902,-4.698,22.604)
O2: (34.480,-0.367,19.465)
C4': (31.809,-2.135,23.232)
C2': (32.659,-0.387,21.872)
O2': (33.359,0.273,22.918)
N1: (33.021,-1.992,20.078)
N3: (33.419,-1.502,17.805)
N4: (32.315,-2.686,16.131)
C6: (32.134,-2.964,19.704)
C5: (31.863,-3.236,18.418)
O3': (30.699,0.089,23.277)
OP1: (28.842,-5.099,24.055)
OP2: (27.521,-4.385,22.126)
C4: (32.538,-2.468,17.432)
O5': (30.006,-3.556,22.395)
C3': (31.345,-0.897,22.470)
C1': (33.310,-1.706,21.498)
O4': (32.762,-2.713,22.335)
C5': (30.748,-3.148,23.576)
P: (28.902,-4.698,22.604)
O2: (34.480,-0.367,19.465)
C4': (31.809,-2.135,23.232)
C2': (32.659,-0.387,21.872)
O2': (33.359,0.273,22.918)
N1: (33.021,-1.992,20.078)
N3: (33.419,-1.502,17.805)
N4: (32.315,-2.686,16.131)
C6: (32.134,-2.964,19.704)
C5: (31.863,-3.236,18.418)
O3': (30.699,0.089,23.277)
C4: (33.973,-5.861,16.684)
N3: (34.781,-5.528,17.731)
OP1: (27.280,-9.302,23.232)
OP2: (29.167,-10.716,22.455)
OP3: (26.966,-10.492,21.139)
O5': (28.649,-8.615,21.124)
C3': (30.446,-6.317,20.930)
C1': (32.773,-6.555,20.676)
C2: (34.414,-5.739,19.031)
O4': (32.164,-7.860,20.691)
C5': (29.981,-8.812,20.571)
P: (28.076,-9.771,22.066)
C4': (30.862,-7.779,21.229)
C2': (31.766,-5.596,21.244)
O2': (31.869,-5.528,22.664)
N1: (33.177,-6.310,19.285)
O4: (34.383,-5.637,15.518)
O2: (35.155,-5.433,19.958)
C6: (32.357,-6.650,18.239)
C5: (32.701,-6.453,16.953)
O3': (29.336,-5.929,21.692)
N3: (34.781,-5.528,17.731)
OP1: (27.280,-9.302,23.232)
OP2: (29.167,-10.716,22.455)
OP3: (26.966,-10.492,21.139)
O5': (28.649,-8.615,21.124)
C3': (30.446,-6.317,20.930)
C1': (32.773,-6.555,20.676)
C2: (34.414,-5.739,19.031)
O4': (32.164,-7.860,20.691)
C5': (29.981,-8.812,20.571)
P: (28.076,-9.771,22.066)
C4': (30.862,-7.779,21.229)
C2': (31.766,-5.596,21.244)
O2': (31.869,-5.528,22.664)
N1: (33.177,-6.310,19.285)
O4: (34.383,-5.637,15.518)
O2: (35.155,-5.433,19.958)
C6: (32.357,-6.650,18.239)
C5: (32.701,-6.453,16.953)
O3': (29.336,-5.929,21.692)
Image (generated by PyMOL):