Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01293:01292
Extra
PDB:
ATOM 1 O3' U A1292 9.917 123.116 65.414 1.00 50.80 O
ATOM 2 P C A1293 9.927 124.690 65.125 1.00 50.96 P
ATOM 3 OP1 C A1293 9.389 124.833 63.752 1.00 51.64 O
ATOM 4 OP2 C A1293 11.269 125.239 65.445 1.00 51.69 O
ATOM 5 O5' C A1293 8.906 125.304 66.186 1.00 49.40 O
ATOM 6 C5' C A1293 7.524 124.897 66.230 1.00 48.92 C
ATOM 7 C4' C A1293 6.852 125.437 67.476 1.00 49.11 C
ATOM 8 O4' C A1293 7.486 124.868 68.651 1.00 49.00 O
ATOM 9 C3' C A1293 6.945 126.941 67.687 1.00 49.03 C
ATOM 10 O3' C A1293 5.933 127.637 66.968 1.00 49.05 O
ATOM 11 C2' C A1293 6.781 127.069 69.196 1.00 49.04 C
ATOM 12 O2' C A1293 5.442 126.955 69.629 1.00 51.46 O
ATOM 13 C1' C A1293 7.549 125.842 69.683 1.00 48.73 C
ATOM 14 N1 C A1293 8.969 126.131 69.983 1.00 48.45 N
ATOM 15 C2 C A1293 9.285 126.863 71.146 1.00 48.78 C
ATOM 16 O2 C A1293 8.372 127.221 71.906 1.00 48.28 O
ATOM 17 N3 C A1293 10.578 127.154 71.411 1.00 48.71 N
ATOM 18 C4 C A1293 11.539 126.732 70.587 1.00 48.59 C
ATOM 19 N4 C A1293 12.804 127.045 70.891 1.00 48.30 N
ATOM 20 C5 C A1293 11.249 125.973 69.412 1.00 48.03 C
ATOM 21 C6 C A1293 9.966 125.702 69.151 1.00 46.99 C
ATOM 22 P C A1294 6.084 129.214 66.695 1.00 50.71 P
ATOM 23 OP1 C A1294 4.961 129.635 65.824 1.00 53.64 O
ATOM 24 OP2 C A1294 7.469 129.486 66.259 1.00 51.57 O
ATOM 25 O5' C A1294 5.899 129.885 68.127 1.00 48.72 O
TER
ATOM 1 O3' C B1291 14.988 119.596 65.366 1.00 53.52 O
ATOM 2 P U B1292 14.731 121.148 65.054 1.00 54.46 P
ATOM 3 OP1 U B1292 14.572 121.246 63.580 1.00 55.81 O
ATOM 4 OP2 U B1292 15.755 121.978 65.739 1.00 52.51 O
ATOM 5 O5' U B1292 13.330 121.451 65.751 1.00 53.28 O
ATOM 6 C5' U B1292 12.137 120.774 65.337 1.00 51.33 C
ATOM 7 C4' U B1292 11.005 121.111 66.270 1.00 53.04 C
ATOM 8 O4' U B1292 11.343 120.658 67.608 1.00 55.20 O
ATOM 9 C3' U B1292 10.711 122.591 66.461 1.00 52.79 C
ATOM 10 O3' U B1292 9.917 123.116 65.414 1.00 50.80 O
ATOM 11 C2' U B1292 9.989 122.607 67.802 1.00 53.51 C
ATOM 12 O2' U B1292 8.625 122.237 67.745 1.00 53.06 O
ATOM 13 C1' U B1292 10.773 121.538 68.566 1.00 54.14 C
ATOM 14 N1 U B1292 11.854 122.149 69.347 1.00 54.12 N
ATOM 15 C2 U B1292 11.506 122.740 70.541 1.00 55.89 C
ATOM 16 O2 U B1292 10.367 122.721 70.982 1.00 56.50 O
ATOM 17 N3 U B1292 12.537 123.352 71.203 1.00 56.76 N
ATOM 18 C4 U B1292 13.854 123.418 70.802 1.00 56.12 C
ATOM 19 O4 U B1292 14.664 124.046 71.487 1.00 57.36 O
ATOM 20 C5 U B1292 14.135 122.753 69.570 1.00 54.69 C
ATOM 21 C6 U B1292 13.151 122.156 68.903 1.00 53.19 C
ATOM 22 P C B1293 9.927 124.690 65.125 1.00 50.96 P
ATOM 23 OP1 C B1293 9.389 124.833 63.752 1.00 51.64 O
ATOM 24 OP2 C B1293 11.269 125.239 65.445 1.00 51.69 O
ATOM 25 O5' C B1293 8.906 125.304 66.186 1.00 49.40 O
TER
ATOM 2 P C A1293 9.927 124.690 65.125 1.00 50.96 P
ATOM 3 OP1 C A1293 9.389 124.833 63.752 1.00 51.64 O
ATOM 4 OP2 C A1293 11.269 125.239 65.445 1.00 51.69 O
ATOM 5 O5' C A1293 8.906 125.304 66.186 1.00 49.40 O
ATOM 6 C5' C A1293 7.524 124.897 66.230 1.00 48.92 C
ATOM 7 C4' C A1293 6.852 125.437 67.476 1.00 49.11 C
ATOM 8 O4' C A1293 7.486 124.868 68.651 1.00 49.00 O
ATOM 9 C3' C A1293 6.945 126.941 67.687 1.00 49.03 C
ATOM 10 O3' C A1293 5.933 127.637 66.968 1.00 49.05 O
ATOM 11 C2' C A1293 6.781 127.069 69.196 1.00 49.04 C
ATOM 12 O2' C A1293 5.442 126.955 69.629 1.00 51.46 O
ATOM 13 C1' C A1293 7.549 125.842 69.683 1.00 48.73 C
ATOM 14 N1 C A1293 8.969 126.131 69.983 1.00 48.45 N
ATOM 15 C2 C A1293 9.285 126.863 71.146 1.00 48.78 C
ATOM 16 O2 C A1293 8.372 127.221 71.906 1.00 48.28 O
ATOM 17 N3 C A1293 10.578 127.154 71.411 1.00 48.71 N
ATOM 18 C4 C A1293 11.539 126.732 70.587 1.00 48.59 C
ATOM 19 N4 C A1293 12.804 127.045 70.891 1.00 48.30 N
ATOM 20 C5 C A1293 11.249 125.973 69.412 1.00 48.03 C
ATOM 21 C6 C A1293 9.966 125.702 69.151 1.00 46.99 C
ATOM 22 P C A1294 6.084 129.214 66.695 1.00 50.71 P
ATOM 23 OP1 C A1294 4.961 129.635 65.824 1.00 53.64 O
ATOM 24 OP2 C A1294 7.469 129.486 66.259 1.00 51.57 O
ATOM 25 O5' C A1294 5.899 129.885 68.127 1.00 48.72 O
TER
ATOM 1 O3' C B1291 14.988 119.596 65.366 1.00 53.52 O
ATOM 2 P U B1292 14.731 121.148 65.054 1.00 54.46 P
ATOM 3 OP1 U B1292 14.572 121.246 63.580 1.00 55.81 O
ATOM 4 OP2 U B1292 15.755 121.978 65.739 1.00 52.51 O
ATOM 5 O5' U B1292 13.330 121.451 65.751 1.00 53.28 O
ATOM 6 C5' U B1292 12.137 120.774 65.337 1.00 51.33 C
ATOM 7 C4' U B1292 11.005 121.111 66.270 1.00 53.04 C
ATOM 8 O4' U B1292 11.343 120.658 67.608 1.00 55.20 O
ATOM 9 C3' U B1292 10.711 122.591 66.461 1.00 52.79 C
ATOM 10 O3' U B1292 9.917 123.116 65.414 1.00 50.80 O
ATOM 11 C2' U B1292 9.989 122.607 67.802 1.00 53.51 C
ATOM 12 O2' U B1292 8.625 122.237 67.745 1.00 53.06 O
ATOM 13 C1' U B1292 10.773 121.538 68.566 1.00 54.14 C
ATOM 14 N1 U B1292 11.854 122.149 69.347 1.00 54.12 N
ATOM 15 C2 U B1292 11.506 122.740 70.541 1.00 55.89 C
ATOM 16 O2 U B1292 10.367 122.721 70.982 1.00 56.50 O
ATOM 17 N3 U B1292 12.537 123.352 71.203 1.00 56.76 N
ATOM 18 C4 U B1292 13.854 123.418 70.802 1.00 56.12 C
ATOM 19 O4 U B1292 14.664 124.046 71.487 1.00 57.36 O
ATOM 20 C5 U B1292 14.135 122.753 69.570 1.00 54.69 C
ATOM 21 C6 U B1292 13.151 122.156 68.903 1.00 53.19 C
ATOM 22 P C B1293 9.927 124.690 65.125 1.00 50.96 P
ATOM 23 OP1 C B1293 9.389 124.833 63.752 1.00 51.64 O
ATOM 24 OP2 C B1293 11.269 125.239 65.445 1.00 51.69 O
ATOM 25 O5' C B1293 8.906 125.304 66.186 1.00 49.40 O
TER
Atoms:
C2: (9.285,126.863,71.146)
OP1: (9.389,124.833,63.752)
OP2: (11.269,125.239,65.445)
C4: (11.539,126.732,70.587)
O5': (8.906,125.304,66.186)
C3': (6.945,126.941,67.687)
C1': (7.549,125.842,69.683)
O4': (7.486,124.868,68.651)
C5': (7.524,124.897,66.230)
P: (9.927,124.690,65.125)
O2: (8.372,127.221,71.906)
C4': (6.852,125.437,67.476)
C2': (6.781,127.069,69.196)
O2': (5.442,126.955,69.629)
N1: (8.969,126.131,69.983)
N3: (10.578,127.154,71.411)
N4: (12.804,127.045,70.891)
C6: (9.966,125.702,69.151)
C5: (11.249,125.973,69.412)
O3': (5.933,127.637,66.968)
OP1: (9.389,124.833,63.752)
OP2: (11.269,125.239,65.445)
C4: (11.539,126.732,70.587)
O5': (8.906,125.304,66.186)
C3': (6.945,126.941,67.687)
C1': (7.549,125.842,69.683)
O4': (7.486,124.868,68.651)
C5': (7.524,124.897,66.230)
P: (9.927,124.690,65.125)
O2: (8.372,127.221,71.906)
C4': (6.852,125.437,67.476)
C2': (6.781,127.069,69.196)
O2': (5.442,126.955,69.629)
N1: (8.969,126.131,69.983)
N3: (10.578,127.154,71.411)
N4: (12.804,127.045,70.891)
C6: (9.966,125.702,69.151)
C5: (11.249,125.973,69.412)
O3': (5.933,127.637,66.968)
C4: (13.854,123.418,70.802)
N3: (12.537,123.352,71.203)
OP1: (14.572,121.246,63.580)
OP2: (15.755,121.978,65.739)
C2: (11.506,122.740,70.541)
C1': (10.773,121.538,68.566)
C3': (10.711,122.591,66.461)
O5': (13.330,121.451,65.751)
O4': (11.343,120.658,67.608)
C5': (12.137,120.774,65.337)
P: (14.731,121.148,65.054)
C4': (11.005,121.111,66.270)
C2': (9.989,122.607,67.802)
O2': (8.625,122.237,67.745)
N1: (11.854,122.149,69.347)
O4: (14.664,124.046,71.487)
O2: (10.367,122.721,70.982)
C6: (13.151,122.156,68.903)
C5: (14.135,122.753,69.570)
O3': (9.917,123.116,65.414)
N3: (12.537,123.352,71.203)
OP1: (14.572,121.246,63.580)
OP2: (15.755,121.978,65.739)
C2: (11.506,122.740,70.541)
C1': (10.773,121.538,68.566)
C3': (10.711,122.591,66.461)
O5': (13.330,121.451,65.751)
O4': (11.343,120.658,67.608)
C5': (12.137,120.774,65.337)
P: (14.731,121.148,65.054)
C4': (11.005,121.111,66.270)
C2': (9.989,122.607,67.802)
O2': (8.625,122.237,67.745)
N1: (11.854,122.149,69.347)
O4: (14.664,124.046,71.487)
O2: (10.367,122.721,70.982)
C6: (13.151,122.156,68.903)
C5: (14.135,122.753,69.570)
O3': (9.917,123.116,65.414)
Image (generated by PyMOL):